RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 KIAA0232Q92628 1395 aa8.58□□□□□ -1.04
HMGN1P36-201ENST00000446623 NUP188Q5SRE5 1749 aa8.57□□□□□ -1.04
HMGN1P36-201ENST00000446623 BHMG1C9JSJ3 638 aaPredicted RBP8.57□□□□□ -1.04
HMGN1P36-201ENST00000446623 TRIM37O94972 964 aa8.57□□□□□ -1.04
HMGN1P36-201ENST00000446623 CHRNA2Q15822 529 aa8.57□□□□□ -1.04
HMGN1P36-201ENST00000446623 FAM196AQ6ZSG2 479 aa8.57□□□□□ -1.04
HMGN1P36-201ENST00000446623 VSIG10Q8N0Z9 540 aa8.57□□□□□ -1.04
HMGN1P36-201ENST00000446623 KCTD12Q96CX2 325 aaKnown RBP8.57□□□□□ -1.04
HMGN1P36-201ENST00000446623 ATP7BP35670 1465 aa8.57□□□□□ -1.04
HMGN1P36-201ENST00000446623 APBA3O96018 575 aa8.56□□□□□ -1.04
HMGN1P36-201ENST00000446623 STRN4Q9NRL3 753 aa8.56□□□□□ -1.04
HMGN1P36-201ENST00000446623 KIAA1468Q9P260 1216 aa8.56□□□□□ -1.04
HMGN1P36-201ENST00000446623 ARHGEF28Q8N1W1 1705 aaKnown RBP8.56□□□□□ -1.04
HMGN1P36-201ENST00000446623 SSH2Q76I76 1423 aa8.55□□□□□ -1.04
HMGN1P36-201ENST00000446623 ZC3H6P61129 1189 aaKnown RBP8.55□□□□□ -1.04
HMGN1P36-201ENST00000446623 MRPL50Q8N5N7 158 aaKnown RBP8.55□□□□□ -1.04
HMGN1P36-201ENST00000446623 USP35Q9P2H5 1018 aa8.55□□□□□ -1.04
HMGN1P36-201ENST00000446623 TOPAZ1Q8N9V7 1692 aa8.55□□□□□ -1.04
HMGN1P36-201ENST00000446623 CAMTA1Q9Y6Y1 1673 aa8.54□□□□□ -1.04
HMGN1P36-201ENST00000446623 NRKQ7Z2Y5 1582 aa8.54□□□□□ -1.04
HMGN1P36-201ENST00000446623 NUTM2GQ5VZR2 741 aa8.54□□□□□ -1.04
HMGN1P36-201ENST00000446623 BARGINQ6ZT62 677 aa8.54□□□□□ -1.04
HMGN1P36-201ENST00000446623 NUDT16Q96DE0 195 aaKnown RBP8.54□□□□□ -1.04
HMGN1P36-201ENST00000446623 RABGEF1Q9UJ41 708 aa8.54□□□□□ -1.04
HMGN1P36-201ENST00000446623 LMO7Q8WWI1 1683 aa8.53□□□□□ -1.04
HMGN1P36-201ENST00000446623 POLR3AO14802 1390 aaPredicted RBP8.53□□□□□ -1.04
HMGN1P36-201ENST00000446623 GOLGA8CPA6NN73 597 aa8.53□□□□□ -1.04
HMGN1P36-201ENST00000446623 TRIM6-TRIM34B2RNG4 842 aa8.53□□□□□ -1.04
HMGN1P36-201ENST00000446623 PDE3BQ13370 1112 aa8.53□□□□□ -1.04
HMGN1P36-201ENST00000446623 DCAF11Q8TEB1 546 aa8.53□□□□□ -1.04
HMGN1P36-201ENST00000446623 NBPF3Q9H094 633 aa8.53□□□□□ -1.04
HMGN1P36-201ENST00000446623 SEPT9Q9UHD8 586 aaPredicted RBP8.53□□□□□ -1.04
HMGN1P36-201ENST00000446623 TSKSQ9UJT2 592 aa8.53□□□□□ -1.04
HMGN1P36-201ENST00000446623 UTRNP46939 3433 aa8.52□□□□□ -1.05
HMGN1P36-201ENST00000446623 YY1P25490 414 aa8.52□□□□□ -1.05
HMGN1P36-201ENST00000446623 EVA1CP58658 441 aa8.52□□□□□ -1.05
HMGN1P36-201ENST00000446623 NBPF8Q3BBV2 869 aa8.52□□□□□ -1.05
HMGN1P36-201ENST00000446623 NBPF14Q5TI25 921 aa8.52□□□□□ -1.05
HMGN1P36-201ENST00000446623 LARP1Q6PKG0 1096 aaKnown RBP8.52□□□□□ -1.05
HMGN1P36-201ENST00000446623 PARP4Q9UKK3 1724 aaKnown RBP8.51□□□□□ -1.05
HMGN1P36-201ENST00000446623 CPDO75976 1380 aa8.51□□□□□ -1.05
HMGN1P36-201ENST00000446623 RAB3GAP2Q9H2M9 1393 aa8.51□□□□□ -1.05
HMGN1P36-201ENST00000446623 TCP11L2Q8N4U5 519 aa8.51□□□□□ -1.05
HMGN1P36-201ENST00000446623 CDCA7LQ96GN5 454 aa8.51□□□□□ -1.05
HMGN1P36-201ENST00000446623 CDK19Q9BWU1 502 aa8.51□□□□□ -1.05
HMGN1P36-201ENST00000446623 PEAK1Q9H792 1746 aa8.51□□□□□ -1.05
HMGN1P36-201ENST00000446623 USP19O94966 1318 aa8.51□□□□□ -1.05
HMGN1P36-201ENST00000446623 ACEP12821 1306 aa8.51□□□□□ -1.05
HMGN1P36-201ENST00000446623 PTPN5P54829 565 aa8.5□□□□□ -1.05
HMGN1P36-201ENST00000446623 PRSS12P56730 875 aa8.5□□□□□ -1.05
HMGN1P36-201ENST00000446623 ABTB2Q8N961 1025 aa8.5□□□□□ -1.05
HMGN1P36-201ENST00000446623 WNT2BQ93097 391 aa8.5□□□□□ -1.05
HMGN1P36-201ENST00000446623 SPON1Q9HCB6 807 aa8.5□□□□□ -1.05
HMGN1P36-201ENST00000446623 FAM198AQ9UFP1 575 aa8.5□□□□□ -1.05
HMGN1P36-201ENST00000446623 RGPD3A6NKT7 1758 aaPredicted RBP8.5□□□□□ -1.05
HMGN1P36-201ENST00000446623 RGPD4Q7Z3J3 1758 aa8.5□□□□□ -1.05
HMGN1P36-201ENST00000446623 COL5A2P05997 1499 aaPredicted RBP8.5□□□□□ -1.05
HMGN1P36-201ENST00000446623 NINLQ9Y2I6 1382 aa8.49□□□□□ -1.05
HMGN1P36-201ENST00000446623 PLEKHG3A1L390 1219 aa8.49□□□□□ -1.05
HMGN1P36-201ENST00000446623 SMAPO00193 183 aa8.49□□□□□ -1.05
HMGN1P36-201ENST00000446623 KCNQ2O43526 872 aa8.49□□□□□ -1.05
HMGN1P36-201ENST00000446623 NPDC1Q9NQX5 325 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P36-201ENST00000446623 PPP1R1BQ9UD71 204 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P36-201ENST00000446623 THRAP3Q9Y2W1 955 aaKnown RBP8.49□□□□□ -1.05
HMGN1P36-201ENST00000446623 LRRC37A3O60309 1634 aa8.49□□□□□ -1.05
HMGN1P36-201ENST00000446623 OVOS2A0A0G2JMS6 1433 aa8.48□□□□□ -1.05
HMGN1P36-201ENST00000446623 OVOS2A0A0J9YW53 1432 aa8.48□□□□□ -1.05
HMGN1P36-201ENST00000446623 CRB1P82279 1406 aa8.48□□□□□ -1.05
HMGN1P36-201ENST00000446623 OVOS2Q6IE36 1432 aa8.48□□□□□ -1.05
HMGN1P36-201ENST00000446623 SBF2Q86WG5 1849 aa8.48□□□□□ -1.05
HMGN1P36-201ENST00000446623 TESPA1A2RU30 521 aaPredicted RBP8.48□□□□□ -1.05
HMGN1P36-201ENST00000446623 C3orf80F5H4A9 247 aa8.48□□□□□ -1.05
HMGN1P36-201ENST00000446623 PACS2Q86VP3 889 aa8.48□□□□□ -1.05
HMGN1P36-201ENST00000446623 CASZ1Q86V15 1759 aa8.48□□□□□ -1.05
HMGN1P36-201ENST00000446623 KIAA1210Q9ULL0 1709 aa8.47□□□□□ -1.05
HMGN1P36-201ENST00000446623 C11orf95C9JLR9 678 aaPredicted RBP8.47□□□□□ -1.05
HMGN1P36-201ENST00000446623 GCP02774 474 aa8.47□□□□□ -1.05
HMGN1P36-201ENST00000446623 RBM26Q5T8P6 1007 aaKnown RBP8.47□□□□□ -1.05
HMGN1P36-201ENST00000446623 HCSTQ9UBK5 93 aa8.47□□□□□ -1.05
HMGN1P36-201ENST00000446623 PPIP5K1Q6PFW1 1433 aa8.46□□□□□ -1.05
HMGN1P36-201ENST00000446623 WNK3Q9BYP7 1800 aa8.46□□□□□ -1.06
HMGN1P36-201ENST00000446623 PLSCR1O15162 318 aa8.46□□□□□ -1.06
HMGN1P36-201ENST00000446623 PADI6Q6TGC4 694 aa8.46□□□□□ -1.06
HMGN1P36-201ENST00000446623 THSD4Q6ZMP0 1018 aa8.46□□□□□ -1.06
HMGN1P36-201ENST00000446623 PTF1AQ7RTS3 328 aa8.46□□□□□ -1.06
HMGN1P36-201ENST00000446623 NLRP13Q86W25 1043 aa8.46□□□□□ -1.06
HMGN1P36-201ENST00000446623 SLIT3O75094 1523 aa8.45□□□□□ -1.06
HMGN1P36-201ENST00000446623 ZBTB7CA1YPR0 619 aa8.45□□□□□ -1.06
HMGN1P36-201ENST00000446623 BCAMP50895 628 aa8.45□□□□□ -1.06
HMGN1P36-201ENST00000446623 ZFRQ96KR1 1074 aaKnown RBP8.45□□□□□ -1.06
HMGN1P36-201ENST00000446623 PDGFDQ9GZP0 370 aaPredicted RBP8.45□□□□□ -1.06
HMGN1P36-201ENST00000446623 PNMA3Q9UL41 463 aa8.45□□□□□ -1.06
HMGN1P36-201ENST00000446623 MYOM1P52179 1685 aa8.45□□□□□ -1.06
HMGN1P36-201ENST00000446623 BRD4O60885 1362 aaPredicted RBP8.45□□□□□ -1.06
HMGN1P36-201ENST00000446623 AATKQ6ZMQ8 1374 aa8.45□□□□□ -1.06
HMGN1P36-201ENST00000446623 COL18A1P39060 1754 aa8.45□□□□□ -1.06
HMGN1P36-201ENST00000446623 AKAP12Q02952 1782 aa8.45□□□□□ -1.06
HMGN1P36-201ENST00000446623 PIK3C2AO00443 1686 aa8.44□□□□□ -1.06
HMGN1P36-201ENST00000446623 SRPK2P78362 688 aaKnown RBP8.44□□□□□ -1.06
HMGN1P36-201ENST00000446623 DDB1Q16531 1140 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms