RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 LINC00116Q8NCU8 138 aa19.57■□□□□ 0.72
SHANK2-209ENST00000445654 TMOD3Q9NYL9 352 aa19.57■□□□□ 0.72
SHANK2-209ENST00000445654 C10orf71Q711Q0 1435 aa19.57■□□□□ 0.72
SHANK2-209ENST00000445654 CAPN15O75808 1086 aa19.56■□□□□ 0.72
SHANK2-209ENST00000445654 TMF1P82094 1093 aa19.56■□□□□ 0.72
SHANK2-209ENST00000445654 N4BP2Q86UW6 1770 aaPredicted RBP19.56■□□□□ 0.72
SHANK2-209ENST00000445654 A0A0G2JLW4 131 aa19.55■□□□□ 0.72
SHANK2-209ENST00000445654 ADRA2BP18089 450 aa19.55■□□□□ 0.72
SHANK2-209ENST00000445654 ATP6V1AP38606 617 aa19.55■□□□□ 0.72
SHANK2-209ENST00000445654 C9orf131Q5VYM1 1079 aa19.55■□□□□ 0.72
SHANK2-209ENST00000445654 RTCBQ9Y3I0 505 aaKnown RBP19.55■□□□□ 0.72
SHANK2-209ENST00000445654 TRAPPC3LQ5T215 181 aa19.54■□□□□ 0.72
SHANK2-209ENST00000445654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.54■□□□□ 0.72
SHANK2-209ENST00000445654 ARFGEF1Q9Y6D6 1849 aa19.53■□□□□ 0.72
SHANK2-209ENST00000445654 TNRC6CQ9HCJ0 1690 aaKnown RBP19.53■□□□□ 0.72
SHANK2-209ENST00000445654 HSP90AB2PQ58FF8 381 aa19.53■□□□□ 0.72
SHANK2-209ENST00000445654 SMIM5Q71RC9 77 aa19.53■□□□□ 0.72
SHANK2-209ENST00000445654 PARP3Q9Y6F1 533 aa19.53■□□□□ 0.72
SHANK2-209ENST00000445654 C4AP0C0L4 1744 aa19.52■□□□□ 0.72
SHANK2-209ENST00000445654 FYB1O15117 783 aa19.52■□□□□ 0.72
SHANK2-209ENST00000445654 SMC1BQ8NDV3 1235 aa19.52■□□□□ 0.72
SHANK2-209ENST00000445654 BRCA1P38398 1863 aaKnown RBP19.52■□□□□ 0.71
SHANK2-209ENST00000445654 DPEP1P16444 411 aa19.51■□□□□ 0.71
SHANK2-209ENST00000445654 GGNBP2Q9H3C7 697 aa19.51■□□□□ 0.71
SHANK2-209ENST00000445654 PIM2Q9P1W9 311 aa19.51■□□□□ 0.71
SHANK2-209ENST00000445654 ZNF831Q5JPB2 1677 aa19.5■□□□□ 0.71
SHANK2-209ENST00000445654 ITPK1Q13572 414 aa19.5■□□□□ 0.71
SHANK2-209ENST00000445654 RC3H1Q5TC82 1133 aaKnown RBP19.5■□□□□ 0.71
SHANK2-209ENST00000445654 NCAPD2Q15021 1401 aa19.5■□□□□ 0.71
SHANK2-209ENST00000445654 RFC4P35249 363 aa19.49■□□□□ 0.71
SHANK2-209ENST00000445654 IFNL2Q8IZJ0 200 aa19.49■□□□□ 0.71
SHANK2-209ENST00000445654 ZC3H4Q9UPT8 1303 aaKnown RBP19.49■□□□□ 0.71
SHANK2-209ENST00000445654 KCPQ6ZWJ8 1503 aa19.48■□□□□ 0.71
SHANK2-209ENST00000445654 HTRA3P83110 453 aa19.48■□□□□ 0.71
SHANK2-209ENST00000445654 DALRD3Q5D0E6 543 aaKnown RBP19.48■□□□□ 0.71
SHANK2-209ENST00000445654 RNF181Q9P0P0 153 aa19.48■□□□□ 0.71
SHANK2-209ENST00000445654 ASAP1Q9ULH1 1129 aa19.48■□□□□ 0.71
SHANK2-209ENST00000445654 KIF20BQ96Q89 1820 aa19.48■□□□□ 0.71
SHANK2-209ENST00000445654 TESK2Q96S53 571 aa19.47■□□□□ 0.71
SHANK2-209ENST00000445654 TONSLQ96HA7 1378 aa19.46■□□□□ 0.71
SHANK2-209ENST00000445654 DCAF5Q96JK2 942 aa19.46■□□□□ 0.71
SHANK2-209ENST00000445654 RRAGCQ9HB90 399 aa19.46■□□□□ 0.71
SHANK2-209ENST00000445654 ATG3Q9NT62 314 aa19.46■□□□□ 0.71
SHANK2-209ENST00000445654 GYS1P13807 737 aa19.45■□□□□ 0.7
SHANK2-209ENST00000445654 ARHGEF1Q92888 912 aaKnown RBP19.45■□□□□ 0.7
SHANK2-209ENST00000445654 CNTNAP4Q9C0A0 1308 aa19.45■□□□□ 0.7
SHANK2-209ENST00000445654 ST20-MTHFSA0A0A6YYL1 179 aa19.44■□□□□ 0.7
SHANK2-209ENST00000445654 RPS6KA4O75676 772 aa19.44■□□□□ 0.7
SHANK2-209ENST00000445654 PHKG2P15735 406 aa19.44■□□□□ 0.7
SHANK2-209ENST00000445654 KDRP35968 1356 aa19.44■□□□□ 0.7
SHANK2-209ENST00000445654 KCNA3P22001 575 aa19.43■□□□□ 0.7
SHANK2-209ENST00000445654 HSP90AB1P08238 724 aaKnown RBP19.42■□□□□ 0.7
SHANK2-209ENST00000445654 HSPA1AP0DMV8 641 aaKnown RBP19.42■□□□□ 0.7
SHANK2-209ENST00000445654 HSPA1BP0DMV9 641 aaKnown RBP19.42■□□□□ 0.7
SHANK2-209ENST00000445654 CDCA8Q53HL2 280 aa19.42■□□□□ 0.7
SHANK2-209ENST00000445654 ERVV-2B6SEH9 535 aa19.41■□□□□ 0.7
SHANK2-209ENST00000445654 RBM42Q9BTD8 480 aaKnown RBP19.41■□□□□ 0.7
SHANK2-209ENST00000445654 COL5A3P25940 1745 aaPredicted RBP19.41■□□□□ 0.7
SHANK2-209ENST00000445654 VEGFAP15692 232 aaPredicted RBP19.4■□□□□ 0.7
SHANK2-209ENST00000445654 WASHC2AQ641Q2 1341 aa19.4■□□□□ 0.7
SHANK2-209ENST00000445654 EMILIN1Q9Y6C2 1016 aa19.39■□□□□ 0.69
SHANK2-209ENST00000445654 SBF1O95248 1867 aa19.39■□□□□ 0.69
SHANK2-209ENST00000445654 PPM1GO15355 546 aaPredicted RBP19.38■□□□□ 0.69
SHANK2-209ENST00000445654 ANKRD26Q9UPS8 1709 aa19.38■□□□□ 0.69
SHANK2-209ENST00000445654 EYA1Q99502 592 aa19.37■□□□□ 0.69
SHANK2-209ENST00000445654 GLTPD2A6NH11 291 aa19.36■□□□□ 0.69
SHANK2-209ENST00000445654 LMNB1P20700 586 aa19.36■□□□□ 0.69
SHANK2-209ENST00000445654 KDM6AO15550 1401 aaPredicted RBP19.34■□□□□ 0.69
SHANK2-209ENST00000445654 USP42Q9H9J4 1324 aaKnown RBP19.34■□□□□ 0.69
SHANK2-209ENST00000445654 SLC4A9Q96Q91 983 aa19.34■□□□□ 0.69
SHANK2-209ENST00000445654 PCNTO95613 3336 aa19.33■□□□□ 0.69
SHANK2-209ENST00000445654 CABP4P57796 275 aa19.32■□□□□ 0.68
SHANK2-209ENST00000445654 CHRNA5P30532 468 aa19.31■□□□□ 0.68
SHANK2-209ENST00000445654 PLEKHO1Q53GL0 409 aaPredicted RBP19.31■□□□□ 0.68
SHANK2-209ENST00000445654 ZPR1O75312 459 aa19.3■□□□□ 0.68
SHANK2-209ENST00000445654 CRKLP46109 303 aaKnown RBP19.3■□□□□ 0.68
SHANK2-209ENST00000445654 DDR1Q08345 913 aa19.3■□□□□ 0.68
SHANK2-209ENST00000445654 FKBP8Q14318 412 aa19.3■□□□□ 0.68
SHANK2-209ENST00000445654 DPY19L2Q6NUT2 758 aa19.3■□□□□ 0.68
SHANK2-209ENST00000445654 MYH14Q7Z406 1995 aaKnown RBP19.3■□□□□ 0.68
SHANK2-209ENST00000445654 AMOTQ4VCS5 1084 aa19.29■□□□□ 0.68
SHANK2-209ENST00000445654 POLRMTO00411 1230 aaKnown RBP19.28■□□□□ 0.68
SHANK2-209ENST00000445654 TM4SF1P30408 202 aa19.28■□□□□ 0.68
SHANK2-209ENST00000445654 SRP68Q9UHB9 627 aaKnown RBP19.28■□□□□ 0.68
SHANK2-209ENST00000445654 TIAM2Q8IVF5 1701 aa19.28■□□□□ 0.68
SHANK2-209ENST00000445654 RASSF7Q02833 373 aa19.27■□□□□ 0.68
SHANK2-209ENST00000445654 PRDM10Q9NQV6 1147 aa19.27■□□□□ 0.68
SHANK2-209ENST00000445654 CREBZFQ9NS37 354 aa19.27■□□□□ 0.68
SHANK2-209ENST00000445654 PTCD1O75127 700 aaKnown RBP19.26■□□□□ 0.67
SHANK2-209ENST00000445654 TTLL6Q8N841 843 aa19.26■□□□□ 0.67
SHANK2-209ENST00000445654 DLEC1Q9Y238 1755 aa19.25■□□□□ 0.67
SHANK2-209ENST00000445654 SLC34A2O95436 690 aa19.25■□□□□ 0.67
SHANK2-209ENST00000445654 EIF4A2Q14240 407 aaKnown RBP19.25■□□□□ 0.67
SHANK2-209ENST00000445654 C1orf141Q5JVX7 400 aa19.25■□□□□ 0.67
SHANK2-209ENST00000445654 ZNF530Q6P9A1 599 aaPredicted RBP19.25■□□□□ 0.67
SHANK2-209ENST00000445654 CARD14Q9BXL6 1004 aa19.25■□□□□ 0.67
SHANK2-209ENST00000445654 POLKQ9UBT6 870 aa19.25■□□□□ 0.67
SHANK2-209ENST00000445654 MTHFSP49914 203 aa19.24■□□□□ 0.67
SHANK2-209ENST00000445654 AIDAQ96BJ3 306 aa19.23■□□□□ 0.67
SHANK2-209ENST00000445654 PDZRN3Q9UPQ7 1066 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms