RNA–Protein interactions for RNA: ENST00000444547.6

SMG7-206, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG7, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-206ENST00000444547 ITPK1Q13572 414 aa24.96■■□□□ 1.59
SMG7-206ENST00000444547 NKX1-1Q15270 411 aaPredicted RBP24.96■■□□□ 1.59
SMG7-206ENST00000444547 ITGB4P16144 1822 aa24.96■■□□□ 1.59
SMG7-206ENST00000444547 WDR90Q96KV7 1748 aa24.95■■□□□ 1.59
SMG7-206ENST00000444547 C9orf131Q5VYM1 1079 aa24.95■■□□□ 1.58
SMG7-206ENST00000444547 JMYQ8N9B5 988 aa24.95■■□□□ 1.58
SMG7-206ENST00000444547 ASAP1Q9ULH1 1129 aa24.95■■□□□ 1.58
SMG7-206ENST00000444547 RTCBQ9Y3I0 505 aaKnown RBP24.95■■□□□ 1.58
SMG7-206ENST00000444547 PLEKHG2Q9H7P9 1386 aa24.94■■□□□ 1.58
SMG7-206ENST00000444547 KDM2BQ8NHM5 1336 aa24.94■■□□□ 1.58
SMG7-206ENST00000444547 DPEP1P16444 411 aa24.94■■□□□ 1.58
SMG7-206ENST00000444547 KIF24Q5T7B8 1368 aa24.93■■□□□ 1.58
SMG7-206ENST00000444547 ST20-MTHFSA0A0A6YYL1 179 aa24.93■■□□□ 1.58
SMG7-206ENST00000444547 TESK2Q96S53 571 aa24.93■■□□□ 1.58
SMG7-206ENST00000444547 PARP3Q9Y6F1 533 aa24.92■■□□□ 1.58
SMG7-206ENST00000444547 N4BP2Q86UW6 1770 aaPredicted RBP24.91■■□□□ 1.58
SMG7-206ENST00000444547 C10orf71Q711Q0 1435 aa24.91■■□□□ 1.58
SMG7-206ENST00000444547 PPM1GO15355 546 aaPredicted RBP24.89■■□□□ 1.58
SMG7-206ENST00000444547 RFC4P35249 363 aa24.89■■□□□ 1.58
SMG7-206ENST00000444547 PRELPP51888 382 aa24.89■■□□□ 1.58
SMG7-206ENST00000444547 MAP2P11137 1827 aaKnown RBP24.89■■□□□ 1.57
SMG7-206ENST00000444547 IFNL2Q8IZJ0 200 aa24.88■■□□□ 1.57
SMG7-206ENST00000444547 PIM2Q9P1W9 311 aa24.88■■□□□ 1.57
SMG7-206ENST00000444547 KIF13BQ9NQT8 1826 aa24.88■■□□□ 1.57
SMG7-206ENST00000444547 ADRA2BP18089 450 aa24.87■■□□□ 1.57
SMG7-206ENST00000444547 ARHGEF1Q92888 912 aaKnown RBP24.87■■□□□ 1.57
SMG7-206ENST00000444547 RRAGCQ9HB90 399 aa24.87■■□□□ 1.57
SMG7-206ENST00000444547 ATG3Q9NT62 314 aa24.87■■□□□ 1.57
SMG7-206ENST00000444547 RNF181Q9P0P0 153 aa24.87■■□□□ 1.57
SMG7-206ENST00000444547 TONSLQ96HA7 1378 aa24.87■■□□□ 1.57
SMG7-206ENST00000444547 PKD1L3Q7Z443 1732 aa24.86■■□□□ 1.57
SMG7-206ENST00000444547 RBM42Q9BTD8 480 aaKnown RBP24.86■■□□□ 1.57
SMG7-206ENST00000444547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.86■■□□□ 1.576e-6■□□□□ 8.9
SMG7-206ENST00000444547 EMILIN1Q9Y6C2 1016 aa24.86■■□□□ 1.57
SMG7-206ENST00000444547 PCNTO95613 3336 aa24.85■■□□□ 1.57
SMG7-206ENST00000444547 DALRD3Q5D0E6 543 aaKnown RBP24.85■■□□□ 1.57
SMG7-206ENST00000444547 SMC1BQ8NDV3 1235 aa24.85■■□□□ 1.57
SMG7-206ENST00000444547 KCPQ6ZWJ8 1503 aa24.85■■□□□ 1.57
SMG7-206ENST00000444547 KIAA1551Q9HCM1 1747 aa24.84■■□□□ 1.57
SMG7-206ENST00000444547 GYS1P13807 737 aa24.84■■□□□ 1.57
SMG7-206ENST00000444547 PHKG2P15735 406 aa24.84■■□□□ 1.57
SMG7-206ENST00000444547 RC3H1Q5TC82 1133 aaKnown RBP24.82■■□□□ 1.56
SMG7-206ENST00000444547 KCNA3P22001 575 aa24.81■■□□□ 1.56
SMG7-206ENST00000444547 DCAF5Q96JK2 942 aa24.81■■□□□ 1.56
SMG7-206ENST00000444547 C4AP0C0L4 1744 aa24.81■■□□□ 1.56
SMG7-206ENST00000444547 RPS6KA4O75676 772 aa24.8■■□□□ 1.56
SMG7-206ENST00000444547 EYA1Q99502 592 aa24.79■■□□□ 1.56
SMG7-206ENST00000444547 CNTNAP4Q9C0A0 1308 aa24.79■■□□□ 1.56
SMG7-206ENST00000444547 NCAPD2Q15021 1401 aa24.78■■□□□ 1.56
SMG7-206ENST00000444547 KDRP35968 1356 aa24.78■■□□□ 1.56
SMG7-206ENST00000444547 HSPA1AP0DMV8 641 aaKnown RBP24.76■■□□□ 1.55
SMG7-206ENST00000444547 HSPA1BP0DMV9 641 aaKnown RBP24.76■■□□□ 1.55
SMG7-206ENST00000444547 CDCA8Q53HL2 280 aa24.76■■□□□ 1.55
SMG7-206ENST00000444547 SLC4A9Q96Q91 983 aa24.76■■□□□ 1.55
SMG7-206ENST00000444547 KIF20BQ96Q89 1820 aa24.76■■□□□ 1.55
SMG7-206ENST00000444547 WASHC2AQ641Q2 1341 aa24.76■■□□□ 1.55
SMG7-206ENST00000444547 ERVV-2B6SEH9 535 aa24.75■■□□□ 1.55
SMG7-206ENST00000444547 HSP90AB1P08238 724 aaKnown RBP24.74■■□□□ 1.55
SMG7-206ENST00000444547 ARFGEF1Q9Y6D6 1849 aa24.74■■□□□ 1.55
SMG7-206ENST00000444547 BRCA1P38398 1863 aaKnown RBP24.74■■□□□ 1.55
SMG7-206ENST00000444547 CHRNA5P30532 468 aa24.73■■□□□ 1.55
SMG7-206ENST00000444547 TNRC6CQ9HCJ0 1690 aaKnown RBP24.72■■□□□ 1.55
SMG7-206ENST00000444547 ZC3H4Q9UPT8 1303 aaKnown RBP24.71■■□□□ 1.55
SMG7-206ENST00000444547 VEGFAP15692 232 aaPredicted RBP24.71■■□□□ 1.55
SMG7-206ENST00000444547 CABP4P57796 275 aa24.71■■□□□ 1.55
SMG7-206ENST00000444547 FKBP8Q14318 412 aa24.71■■□□□ 1.55
SMG7-206ENST00000444547 SRP68Q9UHB9 627 aaKnown RBP24.7■■□□□ 1.54
SMG7-206ENST00000444547 PTCD1O75127 700 aaKnown RBP24.69■■□□□ 1.54
SMG7-206ENST00000444547 DDR1Q08345 913 aa24.68■■□□□ 1.54
SMG7-206ENST00000444547 CARD14Q9BXL6 1004 aa24.68■■□□□ 1.54
SMG7-206ENST00000444547 USP42Q9H9J4 1324 aaKnown RBP24.67■■□□□ 1.54
SMG7-206ENST00000444547 CRKLP46109 303 aaKnown RBP24.67■■□□□ 1.54
SMG7-206ENST00000444547 RASSF7Q02833 373 aa24.67■■□□□ 1.54
SMG7-206ENST00000444547 ZNF831Q5JPB2 1677 aa24.66■■□□□ 1.54
SMG7-206ENST00000444547 GLTPD2A6NH11 291 aa24.66■■□□□ 1.54
SMG7-206ENST00000444547 LMNB1P20700 586 aa24.66■■□□□ 1.54
SMG7-206ENST00000444547 PLEKHO1Q53GL0 409 aaPredicted RBP24.65■■□□□ 1.54
SMG7-206ENST00000444547 COL5A3P25940 1745 aaPredicted RBP24.64■■□□□ 1.54
SMG7-206ENST00000444547 ZPR1O75312 459 aa24.64■■□□□ 1.54
SMG7-206ENST00000444547 EIF4A2Q14240 407 aaKnown RBP24.64■■□□□ 1.54
SMG7-206ENST00000444547 POLKQ9UBT6 870 aa24.64■■□□□ 1.54
SMG7-206ENST00000444547 POLRMTO00411 1230 aaKnown RBP24.63■■□□□ 1.53
SMG7-206ENST00000444547 ZNF530Q6P9A1 599 aaPredicted RBP24.63■■□□□ 1.53
SMG7-206ENST00000444547 MTHFSP49914 203 aa24.62■■□□□ 1.53
SMG7-206ENST00000444547 SBF1O95248 1867 aa24.6■■□□□ 1.53
SMG7-206ENST00000444547 TM4SF1P30408 202 aa24.6■■□□□ 1.53
SMG7-206ENST00000444547 TNNT2P45379 298 aaPredicted RBP24.6■■□□□ 1.53
SMG7-206ENST00000444547 AMOTQ4VCS5 1084 aa24.6■■□□□ 1.53
SMG7-206ENST00000444547 C1orf141Q5JVX7 400 aa24.6■■□□□ 1.53
SMG7-206ENST00000444547 ANKRD26Q9UPS8 1709 aa24.6■■□□□ 1.53
SMG7-206ENST00000444547 DPY19L2Q6NUT2 758 aa24.59■■□□□ 1.53
SMG7-206ENST00000444547 MYH14Q7Z406 1995 aaKnown RBP24.59■■□□□ 1.53
SMG7-206ENST00000444547 USPL1Q5W0Q7 1092 aa24.58■■□□□ 1.53
SMG7-206ENST00000444547 TTLL6Q8N841 843 aa24.58■■□□□ 1.53
SMG7-206ENST00000444547 NFATC2IPQ8NCF5 419 aa24.58■■□□□ 1.53
SMG7-206ENST00000444547 KDM6AO15550 1401 aaPredicted RBP24.58■■□□□ 1.53
SMG7-206ENST00000444547 INTS5Q6P9B9 1019 aaKnown RBP24.54■■□□□ 1.52
SMG7-206ENST00000444547 MKRN1Q9UHC7 482 aaKnown RBP24.54■■□□□ 1.52
SMG7-206ENST00000444547 CREBZFQ9NS37 354 aa24.53■■□□□ 1.52
SMG7-206ENST00000444547 H0YIN7 160 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms