RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 KIF13BQ9NQT8 1826 aa16.49■□□□□ 0.23
TNXB-202ENST00000442721 GNPATO15228 680 aa16.49■□□□□ 0.23
TNXB-202ENST00000442721 PPP4R3CPQ6ZMV5 832 aa16.49■□□□□ 0.23
TNXB-202ENST00000442721 ATG3Q9NT62 314 aa16.49■□□□□ 0.23
TNXB-202ENST00000442721 ZNF831Q5JPB2 1677 aa16.49■□□□□ 0.23
TNXB-202ENST00000442721 KIAA1551Q9HCM1 1747 aa16.48■□□□□ 0.23
TNXB-202ENST00000442721 ATP6V1AP38606 617 aa16.48■□□□□ 0.23
TNXB-202ENST00000442721 EIF4A2Q14240 407 aaKnown RBP16.48■□□□□ 0.23
TNXB-202ENST00000442721 WWC3Q9ULE0 1092 aa16.46■□□□□ 0.23
TNXB-202ENST00000442721 TIMELESSQ9UNS1 1208 aa16.46■□□□□ 0.23
TNXB-202ENST00000442721 PXDNLA1KZ92 1463 aa16.46■□□□□ 0.23
TNXB-202ENST00000442721 COL5A3P25940 1745 aaPredicted RBP16.45■□□□□ 0.22
TNXB-202ENST00000442721 MMP10P09238 476 aa16.45■□□□□ 0.22
TNXB-202ENST00000442721 ZNF526Q8TF50 670 aaPredicted RBP16.45■□□□□ 0.22
TNXB-202ENST00000442721 SLC4A9Q96Q91 983 aa16.45■□□□□ 0.22
TNXB-202ENST00000442721 ERVV-2B6SEH9 535 aa16.44■□□□□ 0.22
TNXB-202ENST00000442721 HSPA6P17066 643 aa16.44■□□□□ 0.22
TNXB-202ENST00000442721 C10orf71Q711Q0 1435 aa16.44■□□□□ 0.22
TNXB-202ENST00000442721 KIF3CO14782 793 aa16.43■□□□□ 0.22
TNXB-202ENST00000442721 TRIM26Q12899 539 aaPredicted RBP16.43■□□□□ 0.22
TNXB-202ENST00000442721 RC3H1Q5TC82 1133 aaKnown RBP16.43■□□□□ 0.22
TNXB-202ENST00000442721 RTCBQ9Y3I0 505 aaKnown RBP16.43■□□□□ 0.22
TNXB-202ENST00000442721 N4BP2Q86UW6 1770 aaPredicted RBP16.43■□□□□ 0.22
TNXB-202ENST00000442721 KDM6AO15550 1401 aaPredicted RBP16.43■□□□□ 0.22
TNXB-202ENST00000442721 TGFB2P61812 414 aa16.42■□□□□ 0.22
TNXB-202ENST00000442721 DCAF5Q96JK2 942 aa16.42■□□□□ 0.22
TNXB-202ENST00000442721 CNTNAP4Q9C0A0 1308 aa16.42■□□□□ 0.22
TNXB-202ENST00000442721 MYH14Q7Z406 1995 aaKnown RBP16.41■□□□□ 0.22
TNXB-202ENST00000442721 HSP90AB1P08238 724 aaKnown RBP16.41■□□□□ 0.22
TNXB-202ENST00000442721 TNNT2P45379 298 aaPredicted RBP16.41■□□□□ 0.22
TNXB-202ENST00000442721 TRAPPC3LQ5T215 181 aa16.41■□□□□ 0.22
TNXB-202ENST00000442721 NLGN1Q8N2Q7 840 aa16.41■□□□□ 0.22
TNXB-202ENST00000442721 C4AP0C0L4 1744 aa16.41■□□□□ 0.22
TNXB-202ENST00000442721 BRCA1P38398 1863 aaKnown RBP16.41■□□□□ 0.22
TNXB-202ENST00000442721 GYS1P13807 737 aa16.4■□□□□ 0.22
TNXB-202ENST00000442721 ARHGEF1Q92888 912 aaKnown RBP16.4■□□□□ 0.22
TNXB-202ENST00000442721 RPS6KA4O75676 772 aa16.39■□□□□ 0.21
TNXB-202ENST00000442721 PLEKHO1Q53GL0 409 aaPredicted RBP16.39■□□□□ 0.21
TNXB-202ENST00000442721 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
TNXB-202ENST00000442721 A0A0G2JLW4 131 aa16.38■□□□□ 0.21
TNXB-202ENST00000442721 ZNF530Q6P9A1 599 aaPredicted RBP16.38■□□□□ 0.21
TNXB-202ENST00000442721 AMOTQ4VCS5 1084 aa16.37■□□□□ 0.21
TNXB-202ENST00000442721 CCDC87Q9NVE4 849 aa16.37■□□□□ 0.21
TNXB-202ENST00000442721 CLSPNQ9HAW4 1339 aa16.37■□□□□ 0.21
TNXB-202ENST00000442721 DPEP1P16444 411 aa16.36■□□□□ 0.21
TNXB-202ENST00000442721 RFC4P35249 363 aa16.36■□□□□ 0.21
TNXB-202ENST00000442721 CABP4P57796 275 aa16.36■□□□□ 0.21
TNXB-202ENST00000442721 POLR3GLQ9BT43 218 aa16.36■□□□□ 0.21
TNXB-202ENST00000442721 BCS1LQ9Y276 419 aa16.36■□□□□ 0.21
TNXB-202ENST00000442721 ARFGEF1Q9Y6D6 1849 aa16.35■□□□□ 0.21
TNXB-202ENST00000442721 AEBP1Q8IUX7 1158 aa16.35■□□□□ 0.21
TNXB-202ENST00000442721 PANK3Q9H999 370 aa16.35■□□□□ 0.21
TNXB-202ENST00000442721 TJP1Q07157 1748 aa16.34■□□□□ 0.21
TNXB-202ENST00000442721 KCNA3P22001 575 aa16.34■□□□□ 0.21
TNXB-202ENST00000442721 PARP3Q9Y6F1 533 aa16.34■□□□□ 0.21
TNXB-202ENST00000442721 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
TNXB-202ENST00000442721 CAPN15O75808 1086 aa16.33■□□□□ 0.2
TNXB-202ENST00000442721 FCHSD2O94868 740 aa16.33■□□□□ 0.2
TNXB-202ENST00000442721 CRKLP46109 303 aaKnown RBP16.33■□□□□ 0.2
TNXB-202ENST00000442721 MTHFSP49914 203 aa16.33■□□□□ 0.2
TNXB-202ENST00000442721 ARHGAP27Q6ZUM4 889 aa16.33■□□□□ 0.2
TNXB-202ENST00000442721 USP42Q9H9J4 1324 aaKnown RBP16.33■□□□□ 0.2
TNXB-202ENST00000442721 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.2
TNXB-202ENST00000442721 PTCD1O75127 700 aaKnown RBP16.32■□□□□ 0.2
TNXB-202ENST00000442721 TOMM70O94826 608 aa16.32■□□□□ 0.2
TNXB-202ENST00000442721 EIF4G2P78344 907 aaKnown RBP eCLIP16.32■□□□□ 0.2
TNXB-202ENST00000442721 C1orf141Q5JVX7 400 aa16.32■□□□□ 0.2
TNXB-202ENST00000442721 NFATC2IPQ8NCF5 419 aa16.32■□□□□ 0.2
TNXB-202ENST00000442721 HSPA5P11021 654 aaKnown RBP16.31■□□□□ 0.2
TNXB-202ENST00000442721 APLP1P51693 650 aa16.31■□□□□ 0.2
TNXB-202ENST00000442721 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
TNXB-202ENST00000442721 DDR1Q08345 913 aa16.3■□□□□ 0.2
TNXB-202ENST00000442721 FKBP8Q14318 412 aa16.3■□□□□ 0.2
TNXB-202ENST00000442721 MORC1Q86VD1 984 aa16.3■□□□□ 0.2
TNXB-202ENST00000442721 NMRK2Q9NPI5 230 aa16.3■□□□□ 0.2
TNXB-202ENST00000442721 IL13P35225 146 aa16.29■□□□□ 0.2
TNXB-202ENST00000442721 C9orf131Q5VYM1 1079 aa16.29■□□□□ 0.2
TNXB-202ENST00000442721 SULT6B1Q6IMI4 303 aa16.29■□□□□ 0.2
TNXB-202ENST00000442721 INTS5Q6P9B9 1019 aaKnown RBP16.29■□□□□ 0.2
TNXB-202ENST00000442721 PIM2Q9P1W9 311 aa16.29■□□□□ 0.2
TNXB-202ENST00000442721 DNAJC5GQ8N7S2 189 aa16.28■□□□□ 0.2
TNXB-202ENST00000442721 MRC1P22897 1456 aa16.28■□□□□ 0.2
TNXB-202ENST00000442721 TM4SF1P30408 202 aa16.27■□□□□ 0.2
TNXB-202ENST00000442721 POLRMTO00411 1230 aaKnown RBP16.26■□□□□ 0.19
TNXB-202ENST00000442721 DALRD3Q5D0E6 543 aaKnown RBP16.26■□□□□ 0.19
TNXB-202ENST00000442721 AKAP4Q5JQC9 854 aa16.26■□□□□ 0.19
TNXB-202ENST00000442721 RBM46Q8TBY0 533 aaKnown RBP16.26■□□□□ 0.19
TNXB-202ENST00000442721 SBF1O95248 1867 aa16.26■□□□□ 0.19
TNXB-202ENST00000442721 SOS1Q07889 1333 aaPredicted RBP16.25■□□□□ 0.19
TNXB-202ENST00000442721 DNAJC10Q8IXB1 793 aa16.25■□□□□ 0.19
TNXB-202ENST00000442721 SLC52A2Q9HAB3 445 aa16.25■□□□□ 0.19
TNXB-202ENST00000442721 WDR90Q96KV7 1748 aa16.25■□□□□ 0.19
TNXB-202ENST00000442721 NRXN2Q9P2S2 1712 aa16.25■□□□□ 0.19
TNXB-202ENST00000442721 KCPQ6ZWJ8 1503 aa16.24■□□□□ 0.19
TNXB-202ENST00000442721 VIRMAQ69YN4 1812 aaKnown RBP16.24■□□□□ 0.19
TNXB-202ENST00000442721 CHRNA5P30532 468 aa16.24■□□□□ 0.19
TNXB-202ENST00000442721 AMER1Q5JTC6 1135 aaPredicted RBP16.24■□□□□ 0.19
TNXB-202ENST00000442721 KNSTRNQ9Y448 316 aa16.24■□□□□ 0.19
TNXB-202ENST00000442721 AFDNP55196 1824 aaKnown RBP16.24■□□□□ 0.19
TNXB-202ENST00000442721 CYP19A1P11511 503 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms