RNA–Protein interactions for RNA: ENST00000442387.2

GACAT3-202, gastric cancer associated transcript 3, humanhuman

TSL 3

Gene GACAT3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-202ENST00000442387 UBR3Q6ZT12 1888 aa15.16■□□□□ 0.02
GACAT3-202ENST00000442387 TNNT2P45379 298 aaPredicted RBP15.15■□□□□ 0.02
GACAT3-202ENST00000442387 MAP2P11137 1827 aaKnown RBP15.15■□□□□ 0.02
GACAT3-202ENST00000442387 MMP10P09238 476 aa15.14■□□□□ 0.01
GACAT3-202ENST00000442387 TRAPPC3LQ5T215 181 aa15.13■□□□□ 0.01
GACAT3-202ENST00000442387 RTCBQ9Y3I0 505 aaKnown RBP15.13■□□□□ 0.01
GACAT3-202ENST00000442387 CEP350Q5VT06 3117 aa15.13■□□□□ 0.01
GACAT3-202ENST00000442387 KDRP35968 1356 aa15.12■□□□□ 0.01
GACAT3-202ENST00000442387 ERVV-2B6SEH9 535 aa15.12■□□□□ 0.01
GACAT3-202ENST00000442387 HSP90AB1P08238 724 aaKnown RBP15.12■□□□□ 0.01
GACAT3-202ENST00000442387 NLGN1Q8N2Q7 840 aa15.11■□□□□ 0.01
GACAT3-202ENST00000442387 DCAF5Q96JK2 942 aa15.11■□□□□ 0.01
GACAT3-202ENST00000442387 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
GACAT3-202ENST00000442387 PXDNLA1KZ92 1463 aa15.1■□□□□ 0.01
GACAT3-202ENST00000442387 HSPA6P17066 643 aa15.1■□□□□ 0.01
GACAT3-202ENST00000442387 TGFB2P61812 414 aa15.1■□□□□ 0.01
GACAT3-202ENST00000442387 PLEKHO1Q53GL0 409 aaPredicted RBP15.1■□□□□ 0.01
GACAT3-202ENST00000442387 SLC4A9Q96Q91 983 aa15.1■□□□□ 0.01
GACAT3-202ENST00000442387 ADRA2BP18089 450 aa15.09■□□□□ 0.01
GACAT3-202ENST00000442387 RC3H1Q5TC82 1133 aaKnown RBP15.09■□□□□ 0.01
GACAT3-202ENST00000442387 CNTNAP4Q9C0A0 1308 aa15.09■□□□□ 0.01
GACAT3-202ENST00000442387 CICQ96RK0 1608 aaPredicted RBP15.08■□□□□ 0
GACAT3-202ENST00000442387 CABP4P57796 275 aa15.08■□□□□ 0
GACAT3-202ENST00000442387 AMOTQ4VCS5 1084 aa15.08■□□□□ 0
GACAT3-202ENST00000442387 IFFO2Q5TF58 517 aa15.08■□□□□ 0
GACAT3-202ENST00000442387 ZNF530Q6P9A1 599 aaPredicted RBP15.08■□□□□ 0
GACAT3-202ENST00000442387 ARHGEF1Q92888 912 aaKnown RBP15.08■□□□□ 0
GACAT3-202ENST00000442387 CCDC87Q9NVE4 849 aa15.08■□□□□ 0
GACAT3-202ENST00000442387 BCS1LQ9Y276 419 aa15.08■□□□□ 0
GACAT3-202ENST00000442387 C10orf71Q711Q0 1435 aa15.08■□□□□ 0
GACAT3-202ENST00000442387 KIF3CO14782 793 aa15.07■□□□□ 0
GACAT3-202ENST00000442387 RPS6KA4O75676 772 aa15.07■□□□□ 0
GACAT3-202ENST00000442387 RFC4P35249 363 aa15.07■□□□□ 0
GACAT3-202ENST00000442387 PCGF6Q9BYE7 350 aa15.07■□□□□ 0
GACAT3-202ENST00000442387 PANK3Q9H999 370 aa15.07■□□□□ 0
GACAT3-202ENST00000442387 CLSPNQ9HAW4 1339 aa15.07■□□□□ 0
GACAT3-202ENST00000442387 KDM6AO15550 1401 aaPredicted RBP15.07■□□□□ 0
GACAT3-202ENST00000442387 A0A0G2JLW4 131 aa15.06■□□□□ 0
GACAT3-202ENST00000442387 GYS1P13807 737 aa15.06■□□□□ 0
GACAT3-202ENST00000442387 PARP3Q9Y6F1 533 aa15.06■□□□□ 0
GACAT3-202ENST00000442387 ZNF831Q5JPB2 1677 aa15.06■□□□□ 0
GACAT3-202ENST00000442387 MTHFSP49914 203 aa15.05■□□□□ -0
GACAT3-202ENST00000442387 EIF4G2P78344 907 aaKnown RBP eCLIP15.05■□□□□ -0
GACAT3-202ENST00000442387 C1orf141Q5JVX7 400 aa15.05■□□□□ -0
GACAT3-202ENST00000442387 HSPA5P11021 654 aaKnown RBP15.04■□□□□ -0
GACAT3-202ENST00000442387 DPEP1P16444 411 aa15.04■□□□□ -0
GACAT3-202ENST00000442387 ARHGAP27Q6ZUM4 889 aa15.04■□□□□ -0
GACAT3-202ENST00000442387 MORC1Q86VD1 984 aa15.04■□□□□ -0
GACAT3-202ENST00000442387 AEBP1Q8IUX7 1158 aa15.04■□□□□ -0
GACAT3-202ENST00000442387 PTCD1O75127 700 aaKnown RBP15.03■□□□□ -0
GACAT3-202ENST00000442387 FCHSD2O94868 740 aa15.03■□□□□ -0
GACAT3-202ENST00000442387 KIF13BQ9NQT8 1826 aa15.03■□□□□ -0
GACAT3-202ENST00000442387 C4AP0C0L4 1744 aa15.03■□□□□ -0
GACAT3-202ENST00000442387 COL5A3P25940 1745 aaPredicted RBP15.03■□□□□ -0
GACAT3-202ENST00000442387 KIAA1551Q9HCM1 1747 aa15.03■□□□□ -0
GACAT3-202ENST00000442387 CRKLP46109 303 aaKnown RBP15.02■□□□□ -0
GACAT3-202ENST00000442387 SULT6B1Q6IMI4 303 aa15.02■□□□□ -0
GACAT3-202ENST00000442387 NFATC2IPQ8NCF5 419 aa15.02■□□□□ -0
GACAT3-202ENST00000442387 USP42Q9H9J4 1324 aaKnown RBP15□□□□□ -0.01
GACAT3-202ENST00000442387 TOMM70O94826 608 aa15□□□□□ -0.01
GACAT3-202ENST00000442387 KCNA3P22001 575 aa15□□□□□ -0.01
GACAT3-202ENST00000442387 SRP68Q9UHB9 627 aaKnown RBP15□□□□□ -0.01
GACAT3-202ENST00000442387 N4BP2Q86UW6 1770 aaPredicted RBP15□□□□□ -0.01
GACAT3-202ENST00000442387 APLP1P51693 650 aa14.99□□□□□ -0.01
GACAT3-202ENST00000442387 FKBP8Q14318 412 aa14.99□□□□□ -0.01
GACAT3-202ENST00000442387 PIM2Q9P1W9 311 aa14.99□□□□□ -0.01
GACAT3-202ENST00000442387 KNSTRNQ9Y448 316 aa14.99□□□□□ -0.01
GACAT3-202ENST00000442387 IL13P35225 146 aa14.98□□□□□ -0.01
GACAT3-202ENST00000442387 DDR1Q08345 913 aa14.98□□□□□ -0.01
GACAT3-202ENST00000442387 NMRK2Q9NPI5 230 aa14.98□□□□□ -0.01
GACAT3-202ENST00000442387 DALRD3Q5D0E6 543 aaKnown RBP14.97□□□□□ -0.01
GACAT3-202ENST00000442387 AKAP4Q5JQC9 854 aa14.97□□□□□ -0.01
GACAT3-202ENST00000442387 C9orf131Q5VYM1 1079 aa14.97□□□□□ -0.01
GACAT3-202ENST00000442387 INTS5Q6P9B9 1019 aaKnown RBP14.96□□□□□ -0.01
GACAT3-202ENST00000442387 SLC52A2Q9HAB3 445 aa14.96□□□□□ -0.01
GACAT3-202ENST00000442387 TJP1Q07157 1748 aa14.95□□□□□ -0.02
GACAT3-202ENST00000442387 POLRMTO00411 1230 aaKnown RBP14.95□□□□□ -0.02
GACAT3-202ENST00000442387 ZPR1O75312 459 aa14.95□□□□□ -0.02
GACAT3-202ENST00000442387 DNAJC10Q8IXB1 793 aa14.95□□□□□ -0.02
GACAT3-202ENST00000442387 TM4SF1P30408 202 aa14.94□□□□□ -0.02
GACAT3-202ENST00000442387 CHRNA5P30532 468 aa14.94□□□□□ -0.02
GACAT3-202ENST00000442387 USPL1Q5W0Q7 1092 aa14.94□□□□□ -0.02
GACAT3-202ENST00000442387 C16orf71Q8IYS4 520 aaPredicted RBP14.94□□□□□ -0.02
GACAT3-202ENST00000442387 LGR6Q9HBX8 967 aa14.94□□□□□ -0.02
GACAT3-202ENST00000442387 MYH14Q7Z406 1995 aaKnown RBP14.94□□□□□ -0.02
GACAT3-202ENST00000442387 SOS1Q07889 1333 aaPredicted RBP14.93□□□□□ -0.02
GACAT3-202ENST00000442387 RBM46Q8TBY0 533 aaKnown RBP14.93□□□□□ -0.02
GACAT3-202ENST00000442387 RNF181Q9P0P0 153 aa14.93□□□□□ -0.02
GACAT3-202ENST00000442387 BRCA1P38398 1863 aaKnown RBP14.93□□□□□ -0.02
GACAT3-202ENST00000442387 KDM2BQ8NHM5 1336 aa14.92□□□□□ -0.02
GACAT3-202ENST00000442387 RNMTO43148 476 aaKnown RBP14.92□□□□□ -0.02
GACAT3-202ENST00000442387 SLC39A6Q13433 755 aa14.92□□□□□ -0.02
GACAT3-202ENST00000442387 AMER1Q5JTC6 1135 aaPredicted RBP14.92□□□□□ -0.02
GACAT3-202ENST00000442387 MRC1P22897 1456 aa14.91□□□□□ -0.02
GACAT3-202ENST00000442387 COL15A1P39059 1388 aa14.91□□□□□ -0.02
GACAT3-202ENST00000442387 HMOX1P09601 288 aa14.91□□□□□ -0.02
GACAT3-202ENST00000442387 CYP19A1P11511 503 aaPredicted RBP14.91□□□□□ -0.02
GACAT3-202ENST00000442387 DNAJC5GQ8N7S2 189 aa14.91□□□□□ -0.02
GACAT3-202ENST00000442387 NARFQ9UHQ1 456 aa14.91□□□□□ -0.02
GACAT3-202ENST00000442387 KCPQ6ZWJ8 1503 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms