RNA–Protein interactions for RNA: ENST00000441366.6

EPB42-202, Transcript of erythrocyte membrane protein band 4.2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPB42, Length 2,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-202ENST00000441366 PRDM11Q9NQV5 511 aa16.74■□□□□ 0.27
EPB42-202ENST00000441366 BRPF3Q9ULD4 1205 aa16.74■□□□□ 0.27
EPB42-202ENST00000441366 SOS2Q07890 1332 aaPredicted RBP16.74■□□□□ 0.27
EPB42-202ENST00000441366 COL18A1P39060 1754 aa16.74■□□□□ 0.27
EPB42-202ENST00000441366 NCAPD2Q15021 1401 aa16.73■□□□□ 0.27
EPB42-202ENST00000441366 PTPRCP08575 1304 aa16.73■□□□□ 0.27
EPB42-202ENST00000441366 EIF4A1P60842 406 aaKnown RBP16.73■□□□□ 0.27
EPB42-202ENST00000441366 INTS3Q68E01 1043 aaKnown RBP16.73■□□□□ 0.27
EPB42-202ENST00000441366 SIRT2Q8IXJ6 389 aa16.73■□□□□ 0.27
EPB42-202ENST00000441366 TATP17735 454 aaPredicted RBP16.72■□□□□ 0.27
EPB42-202ENST00000441366 FKBP5Q13451 457 aaPredicted RBP16.72■□□□□ 0.27
EPB42-202ENST00000441366 HDGFL1Q5TGJ6 251 aa16.72■□□□□ 0.27
EPB42-202ENST00000441366 VIRMAQ69YN4 1812 aaKnown RBP16.72■□□□□ 0.27
EPB42-202ENST00000441366 LMO7Q8WWI1 1683 aa16.72■□□□□ 0.27
EPB42-202ENST00000441366 UBE2Q2Q8WVN8 375 aa16.72■□□□□ 0.27
EPB42-202ENST00000441366 FLIIQ13045 1269 aa16.71■□□□□ 0.27
EPB42-202ENST00000441366 SMC5Q8IY18 1101 aa16.71■□□□□ 0.27
EPB42-202ENST00000441366 MEIS3Q99687 375 aa16.71■□□□□ 0.27
EPB42-202ENST00000441366 CHMP4BQ9H444 224 aaKnown RBP16.71■□□□□ 0.27
EPB42-202ENST00000441366 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.27
EPB42-202ENST00000441366 CRYBG1Q9Y4K1 1723 aa16.71■□□□□ 0.27
EPB42-202ENST00000441366 LNPKQ9C0E8 428 aa16.71■□□□□ 0.26
EPB42-202ENST00000441366 BABAM1Q9NWV8 329 aa16.71■□□□□ 0.26
EPB42-202ENST00000441366 MEGF6O75095 1541 aa16.71■□□□□ 0.26
EPB42-202ENST00000441366 CAMTA1Q9Y6Y1 1673 aa16.71■□□□□ 0.26
EPB42-202ENST00000441366 ANXA1P04083 346 aa16.7■□□□□ 0.26
EPB42-202ENST00000441366 GSE1Q14687 1217 aa16.7■□□□□ 0.26
EPB42-202ENST00000441366 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
EPB42-202ENST00000441366 STRN4Q9NRL3 753 aa16.69■□□□□ 0.26
EPB42-202ENST00000441366 ANKRD45Q5TZF3 282 aa16.69■□□□□ 0.26
EPB42-202ENST00000441366 TOM1L2Q6ZVM7 507 aa16.69■□□□□ 0.26
EPB42-202ENST00000441366 CPDO75976 1380 aa16.68■□□□□ 0.26
EPB42-202ENST00000441366 SLC39A6Q13433 755 aa16.68■□□□□ 0.26
EPB42-202ENST00000441366 FAM208AQ9UK61 1670 aaKnown RBP16.68■□□□□ 0.26
EPB42-202ENST00000441366 CHPF2Q9P2E5 772 aa16.67■□□□□ 0.26
EPB42-202ENST00000441366 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
EPB42-202ENST00000441366 SEC24BO95487 1268 aa16.67■□□□□ 0.26
EPB42-202ENST00000441366 PHKG2P15735 406 aa16.67■□□□□ 0.26
EPB42-202ENST00000441366 NFATC2IPQ8NCF5 419 aa16.67■□□□□ 0.26
EPB42-202ENST00000441366 KDM3BQ7LBC6 1761 aa16.66■□□□□ 0.26
EPB42-202ENST00000441366 CYP27B1O15528 508 aa16.66■□□□□ 0.26
EPB42-202ENST00000441366 NUCB1Q02818 461 aa16.66■□□□□ 0.26
EPB42-202ENST00000441366 NFKBIBQ15653 356 aa16.65■□□□□ 0.26
EPB42-202ENST00000441366 CHD1LQ86WJ1 897 aa16.65■□□□□ 0.26
EPB42-202ENST00000441366 IFNL2Q8IZJ0 200 aa16.65■□□□□ 0.26
EPB42-202ENST00000441366 DDRGK1Q96HY6 314 aa16.65■□□□□ 0.26
EPB42-202ENST00000441366 APBB1O00213 710 aa16.64■□□□□ 0.25
EPB42-202ENST00000441366 KDM6AO15550 1401 aaPredicted RBP16.64■□□□□ 0.25
EPB42-202ENST00000441366 CCT4P50991 539 aaKnown RBP16.64■□□□□ 0.25
EPB42-202ENST00000441366 EVA1CP58658 441 aa16.64■□□□□ 0.25
EPB42-202ENST00000441366 GIGYF1O75420 1035 aaPredicted RBP16.63■□□□□ 0.25
EPB42-202ENST00000441366 CEP85Q6P2H3 762 aa16.63■□□□□ 0.25
EPB42-202ENST00000441366 LARP1Q6PKG0 1096 aaKnown RBP16.63■□□□□ 0.25
EPB42-202ENST00000441366 WDR17Q8IZU2 1322 aa16.63■□□□□ 0.25
EPB42-202ENST00000441366 GCC1Q96CN9 775 aa16.63■□□□□ 0.25
EPB42-202ENST00000441366 SLC52A2Q9HAB3 445 aa16.63■□□□□ 0.25
EPB42-202ENST00000441366 SOS1Q07889 1333 aaPredicted RBP16.62■□□□□ 0.25
EPB42-202ENST00000441366 CACNA1FO60840 1977 aa16.62■□□□□ 0.25
EPB42-202ENST00000441366 PROSER3Q2NL68 480 aa16.62■□□□□ 0.25
EPB42-202ENST00000441366 ANKRD44Q8N8A2 993 aa16.62■□□□□ 0.25
EPB42-202ENST00000441366 ZNF790Q6PG37 636 aa16.61■□□□□ 0.25
EPB42-202ENST00000441366 ATP10DQ9P241 1426 aa16.61■□□□□ 0.25
EPB42-202ENST00000441366 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.6■□□□□ 0.25
EPB42-202ENST00000441366 COL5A2P05997 1499 aaPredicted RBP16.6■□□□□ 0.25
EPB42-202ENST00000441366 NHSL1Q5SYE7 1610 aa16.6■□□□□ 0.25
EPB42-202ENST00000441366 PI4KAP2A4QPH2 592 aa16.6■□□□□ 0.25
EPB42-202ENST00000441366 PI4KAP1Q8N8J0 262 aa16.6■□□□□ 0.25
EPB42-202ENST00000441366 HOXB7P09629 217 aa16.59■□□□□ 0.25
EPB42-202ENST00000441366 RPAP2Q8IXW5 612 aaPredicted RBP16.59■□□□□ 0.25
EPB42-202ENST00000441366 DDX54Q8TDD1 881 aaKnown RBP16.59■□□□□ 0.25
EPB42-202ENST00000441366 SIPA1L3O60292 1781 aaPredicted RBP16.59■□□□□ 0.25
EPB42-202ENST00000441366 SCN11AQ9UI33 1791 aa16.59■□□□□ 0.25
EPB42-202ENST00000441366 ABCA3Q99758 1704 aa16.59■□□□□ 0.25
EPB42-202ENST00000441366 SLC4A3P48751 1232 aa16.59■□□□□ 0.25
EPB42-202ENST00000441366 DCAF5Q96JK2 942 aa16.59■□□□□ 0.25
EPB42-202ENST00000441366 DCTPP1Q9H773 170 aa16.59■□□□□ 0.25
EPB42-202ENST00000441366 OVOS2A0A0G2JMS6 1433 aa16.59■□□□□ 0.25
EPB42-202ENST00000441366 C16orf71Q8IYS4 520 aaPredicted RBP16.58■□□□□ 0.25
EPB42-202ENST00000441366 DBF4Q9UBU7 674 aaPredicted RBP16.58■□□□□ 0.25
EPB42-202ENST00000441366 SMARCA5O60264 1052 aaPredicted RBP16.58■□□□□ 0.24
EPB42-202ENST00000441366 EIF5BO60841 1220 aaKnown RBP16.58■□□□□ 0.24
EPB42-202ENST00000441366 GNAI2P04899 355 aa16.58■□□□□ 0.24
EPB42-202ENST00000441366 CABP4P57796 275 aa16.58■□□□□ 0.24
EPB42-202ENST00000441366 AIMP1Q12904 312 aaKnown RBP16.58■□□□□ 0.24
EPB42-202ENST00000441366 ZCRB1Q8TBF4 217 aaKnown RBP16.58■□□□□ 0.24
EPB42-202ENST00000441366 ZNF496Q96IT1 587 aaPredicted RBP16.58■□□□□ 0.24
EPB42-202ENST00000441366 BTG4Q9NY30 223 aa16.58■□□□□ 0.24
EPB42-202ENST00000441366 ABCC6O95255 1503 aa16.58■□□□□ 0.24
EPB42-202ENST00000441366 PIP4K2AP48426 406 aaPredicted RBP16.57■□□□□ 0.24
EPB42-202ENST00000441366 USP44Q9H0E7 712 aa16.57■□□□□ 0.24
EPB42-202ENST00000441366 ADAMTS7Q9UKP4 1686 aa16.56■□□□□ 0.24
EPB42-202ENST00000441366 ROBO1Q9Y6N7 1651 aa16.56■□□□□ 0.24
EPB42-202ENST00000441366 HEG1Q9ULI3 1381 aa16.56■□□□□ 0.24
EPB42-202ENST00000441366 MYL6BP14649 208 aa16.56■□□□□ 0.24
EPB42-202ENST00000441366 IL2RBP14784 551 aa16.56■□□□□ 0.24
EPB42-202ENST00000441366 LRRFIP2Q9Y608 721 aaKnown RBP16.56■□□□□ 0.24
EPB42-202ENST00000441366 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
EPB42-202ENST00000441366 DNAAF4Q8WXU2 420 aa16.56■□□□□ 0.24
EPB42-202ENST00000441366 CARD10Q9BWT7 1032 aa16.56■□□□□ 0.24
EPB42-202ENST00000441366 SRCIN1Q9C0H9 1055 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms