RNA–Protein interactions for RNA: ENST00000440318.5

FAM3A-213, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-213ENST00000440318 NKX1-1Q15270 411 aaPredicted RBP18.58■□□□□ 0.56
FAM3A-213ENST00000440318 JMYQ8N9B5 988 aa18.58■□□□□ 0.56
FAM3A-213ENST00000440318 RBM46Q8TBY0 533 aaKnown RBP18.58■□□□□ 0.56
FAM3A-213ENST00000440318 KLRG1Q96E93 195 aa18.58■□□□□ 0.56
FAM3A-213ENST00000440318 ASAP1Q9ULH1 1129 aa18.58■□□□□ 0.56
FAM3A-213ENST00000440318 BRCA1P38398 1863 aaKnown RBP18.57■□□□□ 0.56
FAM3A-213ENST00000440318 TGFB2P61812 414 aa18.57■□□□□ 0.56
FAM3A-213ENST00000440318 TIMELESSQ9UNS1 1208 aa18.57■□□□□ 0.56
FAM3A-213ENST00000440318 DPEP1P16444 411 aa18.56■□□□□ 0.56
FAM3A-213ENST00000440318 NCAPD2Q15021 1401 aa18.56■□□□□ 0.56
FAM3A-213ENST00000440318 ST20-MTHFSA0A0A6YYL1 179 aa18.55■□□□□ 0.56
FAM3A-213ENST00000440318 ATP6V1AP38606 617 aa18.55■□□□□ 0.56
FAM3A-213ENST00000440318 C4AP0C0L4 1744 aa18.54■□□□□ 0.56
FAM3A-213ENST00000440318 PCNTO95613 3336 aa18.54■□□□□ 0.56
FAM3A-213ENST00000440318 KIF20BQ96Q89 1820 aa18.54■□□□□ 0.56
FAM3A-213ENST00000440318 C9orf131Q5VYM1 1079 aa18.54■□□□□ 0.56
FAM3A-213ENST00000440318 TMOD3Q9NYL9 352 aa18.54■□□□□ 0.56
FAM3A-213ENST00000440318 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
FAM3A-213ENST00000440318 FCHSD2O94868 740 aa18.53■□□□□ 0.56
FAM3A-213ENST00000440318 KIF24Q5T7B8 1368 aa18.53■□□□□ 0.56
FAM3A-213ENST00000440318 FSTL1Q12841 308 aa18.52■□□□□ 0.56
FAM3A-213ENST00000440318 C16orf71Q8IYS4 520 aaPredicted RBP18.52■□□□□ 0.56
FAM3A-213ENST00000440318 ATG3Q9NT62 314 aa18.52■□□□□ 0.56
FAM3A-213ENST00000440318 EMILIN1Q9Y6C2 1016 aa18.52■□□□□ 0.56
FAM3A-213ENST00000440318 KDRP35968 1356 aa18.52■□□□□ 0.55
FAM3A-213ENST00000440318 ARFGEF1Q9Y6D6 1849 aa18.51■□□□□ 0.55
FAM3A-213ENST00000440318 KCNA3P22001 575 aa18.51■□□□□ 0.55
FAM3A-213ENST00000440318 TMF1P82094 1093 aa18.51■□□□□ 0.55
FAM3A-213ENST00000440318 TNS4Q8IZW8 715 aa18.51■□□□□ 0.55
FAM3A-213ENST00000440318 NLGN1Q8N2Q7 840 aa18.51■□□□□ 0.55
FAM3A-213ENST00000440318 SPG7Q9UQ90 795 aa18.51■□□□□ 0.55
FAM3A-213ENST00000440318 PLEKHG2Q9H7P9 1386 aa18.51■□□□□ 0.55
FAM3A-213ENST00000440318 TRAPPC3LQ5T215 181 aa18.5■□□□□ 0.55
FAM3A-213ENST00000440318 SLC4A9Q96Q91 983 aa18.5■□□□□ 0.55
FAM3A-213ENST00000440318 CCDC87Q9NVE4 849 aa18.5■□□□□ 0.55
FAM3A-213ENST00000440318 GYS1P13807 737 aa18.49■□□□□ 0.55
FAM3A-213ENST00000440318 PRELPP51888 382 aa18.49■□□□□ 0.55
FAM3A-213ENST00000440318 ARHGEF1Q92888 912 aaKnown RBP18.49■□□□□ 0.55
FAM3A-213ENST00000440318 RTCBQ9Y3I0 505 aaKnown RBP18.49■□□□□ 0.55
FAM3A-213ENST00000440318 COL5A3P25940 1745 aaPredicted RBP18.49■□□□□ 0.55
FAM3A-213ENST00000440318 PHKG2P15735 406 aa18.48■□□□□ 0.55
FAM3A-213ENST00000440318 ANKRD26Q9UPS8 1709 aa18.47■□□□□ 0.55
FAM3A-213ENST00000440318 DCAF5Q96JK2 942 aa18.47■□□□□ 0.55
FAM3A-213ENST00000440318 RRAGCQ9HB90 399 aa18.47■□□□□ 0.55
FAM3A-213ENST00000440318 ZNF831Q5JPB2 1677 aa18.47■□□□□ 0.55
FAM3A-213ENST00000440318 TNRC6CQ9HCJ0 1690 aaKnown RBP18.47■□□□□ 0.55
FAM3A-213ENST00000440318 KDM2BQ8NHM5 1336 aa18.47■□□□□ 0.55
FAM3A-213ENST00000440318 EYA1Q99502 592 aa18.46■□□□□ 0.55
FAM3A-213ENST00000440318 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.46■□□□□ 0.55
FAM3A-213ENST00000440318 RNF181Q9P0P0 153 aa18.46■□□□□ 0.55
FAM3A-213ENST00000440318 PARP3Q9Y6F1 533 aa18.46■□□□□ 0.55
FAM3A-213ENST00000440318 ADRA2BP18089 450 aa18.45■□□□□ 0.54
FAM3A-213ENST00000440318 IFNL2Q8IZJ0 200 aa18.45■□□□□ 0.54
FAM3A-213ENST00000440318 PPM1GO15355 546 aaPredicted RBP18.44■□□□□ 0.54
FAM3A-213ENST00000440318 RFC4P35249 363 aa18.44■□□□□ 0.54
FAM3A-213ENST00000440318 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
FAM3A-213ENST00000440318 PIM2Q9P1W9 311 aa18.44■□□□□ 0.54
FAM3A-213ENST00000440318 CNTNAP4Q9C0A0 1308 aa18.44■□□□□ 0.54
FAM3A-213ENST00000440318 SBF1O95248 1867 aa18.43■□□□□ 0.54
FAM3A-213ENST00000440318 MYH14Q7Z406 1995 aaKnown RBP18.43■□□□□ 0.54
FAM3A-213ENST00000440318 RC3H1Q5TC82 1133 aaKnown RBP18.43■□□□□ 0.54
FAM3A-213ENST00000440318 CARD14Q9BXL6 1004 aa18.43■□□□□ 0.54
FAM3A-213ENST00000440318 RPS6KA4O75676 772 aa18.42■□□□□ 0.54
FAM3A-213ENST00000440318 DALRD3Q5D0E6 543 aaKnown RBP18.42■□□□□ 0.54
FAM3A-213ENST00000440318 SMC1BQ8NDV3 1235 aa18.42■□□□□ 0.54
FAM3A-213ENST00000440318 WASHC2AQ641Q2 1341 aa18.42■□□□□ 0.54
FAM3A-213ENST00000440318 SLC24A1O60721 1099 aa18.41■□□□□ 0.54
FAM3A-213ENST00000440318 CHRNA5P30532 468 aa18.41■□□□□ 0.54
FAM3A-213ENST00000440318 DDR1Q08345 913 aa18.41■□□□□ 0.54
FAM3A-213ENST00000440318 SRP68Q9UHB9 627 aaKnown RBP18.41■□□□□ 0.54
FAM3A-213ENST00000440318 HSPA1AP0DMV8 641 aaKnown RBP18.4■□□□□ 0.54
FAM3A-213ENST00000440318 HSPA1BP0DMV9 641 aaKnown RBP18.4■□□□□ 0.54
FAM3A-213ENST00000440318 FKBP8Q14318 412 aa18.39■□□□□ 0.53
FAM3A-213ENST00000440318 RASSF7Q02833 373 aa18.38■□□□□ 0.53
FAM3A-213ENST00000440318 ERVV-2B6SEH9 535 aa18.37■□□□□ 0.53
FAM3A-213ENST00000440318 ZEB1P37275 1124 aaPredicted RBP18.37■□□□□ 0.53
FAM3A-213ENST00000440318 USP42Q9H9J4 1324 aaKnown RBP18.37■□□□□ 0.53
FAM3A-213ENST00000440318 KDM6AO15550 1401 aaPredicted RBP18.37■□□□□ 0.53
FAM3A-213ENST00000440318 CRKLP46109 303 aaKnown RBP18.35■□□□□ 0.53
FAM3A-213ENST00000440318 EIF4A2Q14240 407 aaKnown RBP18.35■□□□□ 0.53
FAM3A-213ENST00000440318 POLKQ9UBT6 870 aa18.35■□□□□ 0.53
FAM3A-213ENST00000440318 TJP1Q07157 1748 aa18.35■□□□□ 0.53
FAM3A-213ENST00000440318 ADAMTS7Q9UKP4 1686 aa18.34■□□□□ 0.53
FAM3A-213ENST00000440318 POLRMTO00411 1230 aaKnown RBP18.34■□□□□ 0.53
FAM3A-213ENST00000440318 ZC3H4Q9UPT8 1303 aaKnown RBP18.33■□□□□ 0.53
FAM3A-213ENST00000440318 PTCD1O75127 700 aaKnown RBP18.33■□□□□ 0.52
FAM3A-213ENST00000440318 VEGFAP15692 232 aaPredicted RBP18.32■□□□□ 0.52
FAM3A-213ENST00000440318 TIAM2Q8IVF5 1701 aa18.32■□□□□ 0.52
FAM3A-213ENST00000440318 GLTPD2A6NH11 291 aa18.31■□□□□ 0.52
FAM3A-213ENST00000440318 TM4SF1P30408 202 aa18.31■□□□□ 0.52
FAM3A-213ENST00000440318 CABP4P57796 275 aa18.31■□□□□ 0.52
FAM3A-213ENST00000440318 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
FAM3A-213ENST00000440318 INTS5Q6P9B9 1019 aaKnown RBP18.3■□□□□ 0.52
FAM3A-213ENST00000440318 LMNB1P20700 586 aa18.29■□□□□ 0.52
FAM3A-213ENST00000440318 CDCA8Q53HL2 280 aa18.29■□□□□ 0.52
FAM3A-213ENST00000440318 ZNF530Q6P9A1 599 aaPredicted RBP18.29■□□□□ 0.52
FAM3A-213ENST00000440318 DLEC1Q9Y238 1755 aa18.29■□□□□ 0.52
FAM3A-213ENST00000440318 AFDNP55196 1824 aaKnown RBP18.28■□□□□ 0.52
FAM3A-213ENST00000440318 POTECB2RU33 542 aa18.28■□□□□ 0.52
FAM3A-213ENST00000440318 HSPA5P11021 654 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms