RNA–Protein interactions for RNA: ENST00000440264.5

CCNA1-202, Transcript of cyclin A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCNA1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-202ENST00000440264 SMC5Q8IY18 1101 aa23.77■■□□□ 1.4
CCNA1-202ENST00000440264 KCNQ3O43525 872 aa23.76■■□□□ 1.39
CCNA1-202ENST00000440264 MRC1P22897 1456 aa23.76■■□□□ 1.39
CCNA1-202ENST00000440264 RAPGEF4Q8WZA2 1011 aa23.75■■□□□ 1.39
CCNA1-202ENST00000440264 PDZRN3Q9UPQ7 1066 aa23.75■■□□□ 1.39
CCNA1-202ENST00000440264 WDR17Q8IZU2 1322 aa23.75■■□□□ 1.39
CCNA1-202ENST00000440264 PARP4Q9UKK3 1724 aaKnown RBP23.75■■□□□ 1.39
CCNA1-202ENST00000440264 COL22A1Q8NFW1 1626 aaPredicted RBP23.74■■□□□ 1.39
CCNA1-202ENST00000440264 HOXB7P09629 217 aa23.74■■□□□ 1.39
CCNA1-202ENST00000440264 CCDC30Q5VVM6 783 aa23.74■■□□□ 1.39
CCNA1-202ENST00000440264 CHMP4BQ9H444 224 aaKnown RBP23.74■■□□□ 1.39
CCNA1-202ENST00000440264 PHKG2P15735 406 aa23.73■■□□□ 1.39
CCNA1-202ENST00000440264 TATP17735 454 aaPredicted RBP23.73■■□□□ 1.39
CCNA1-202ENST00000440264 SIRT2Q8IXJ6 389 aa23.73■■□□□ 1.39
CCNA1-202ENST00000440264 PRDM11Q9NQV5 511 aa23.73■■□□□ 1.39
CCNA1-202ENST00000440264 RGS3P49796 1198 aa23.73■■□□□ 1.39
CCNA1-202ENST00000440264 TEFQ10587 303 aa23.73■■□□□ 1.39
CCNA1-202ENST00000440264 CSB-PGBD3P0DP91 1061 aa23.72■■□□□ 1.39
CCNA1-202ENST00000440264 C8orf34Q49A92 452 aa23.72■■□□□ 1.39
CCNA1-202ENST00000440264 SHANK3Q9BYB0 1731 aa23.72■■□□□ 1.39
CCNA1-202ENST00000440264 ATP10DQ9P241 1426 aa23.72■■□□□ 1.39
CCNA1-202ENST00000440264 BTBD11A6QL63 1104 aa23.71■■□□□ 1.39
CCNA1-202ENST00000440264 CYP27B1O15528 508 aa23.7■■□□□ 1.39
CCNA1-202ENST00000440264 SPG7Q9UQ90 795 aa23.7■■□□□ 1.38
CCNA1-202ENST00000440264 FLIIQ13045 1269 aa23.69■■□□□ 1.38
CCNA1-202ENST00000440264 STK31Q9BXU1 1019 aa23.69■■□□□ 1.38
CCNA1-202ENST00000440264 C1orf115Q9H7X2 142 aa23.69■■□□□ 1.38
CCNA1-202ENST00000440264 COL16A1Q07092 1604 aaPredicted RBP23.68■■□□□ 1.38
CCNA1-202ENST00000440264 PXDNLA1KZ92 1463 aa23.68■■□□□ 1.38
CCNA1-202ENST00000440264 F6X3S4 739 aa23.67■■□□□ 1.38
CCNA1-202ENST00000440264 HDGFL1Q5TGJ6 251 aa23.67■■□□□ 1.38
CCNA1-202ENST00000440264 IFNL2Q8IZJ0 200 aa23.67■■□□□ 1.38
CCNA1-202ENST00000440264 FAM161AQ3B820 660 aa23.66■■□□□ 1.38
CCNA1-202ENST00000440264 GLI3P10071 1580 aa23.66■■□□□ 1.38
CCNA1-202ENST00000440264 NECTIN2Q92692 538 aa23.65■■□□□ 1.38
CCNA1-202ENST00000440264 CARD10Q9BWT7 1032 aa23.65■■□□□ 1.38
CCNA1-202ENST00000440264 SLC52A2Q9HAB3 445 aa23.65■■□□□ 1.38
CCNA1-202ENST00000440264 C5P01031 1676 aa23.65■■□□□ 1.38
CCNA1-202ENST00000440264 GIGYF1O75420 1035 aaPredicted RBP23.65■■□□□ 1.38
CCNA1-202ENST00000440264 COL14A1Q05707 1796 aaKnown RBP23.64■■□□□ 1.37
CCNA1-202ENST00000440264 CCT4P50991 539 aaKnown RBP23.63■■□□□ 1.37
CCNA1-202ENST00000440264 NUCB1Q02818 461 aa23.63■■□□□ 1.37
CCNA1-202ENST00000440264 MEIS3Q99687 375 aa23.63■■□□□ 1.37
CCNA1-202ENST00000440264 DCAF5Q96JK2 942 aa23.63■■□□□ 1.37
CCNA1-202ENST00000440264 PHAXQ9H814 394 aaKnown RBP23.62■■□□□ 1.37
CCNA1-202ENST00000440264 LARP1Q6PKG0 1096 aaKnown RBP23.61■■□□□ 1.37
CCNA1-202ENST00000440264 TOM1L2Q6ZVM7 507 aa23.61■■□□□ 1.37
CCNA1-202ENST00000440264 ANKRD44Q8N8A2 993 aa23.6■■□□□ 1.37
CCNA1-202ENST00000440264 CHPF2Q9P2E5 772 aa23.6■■□□□ 1.37
CCNA1-202ENST00000440264 MSH5O43196 834 aa23.6■■□□□ 1.37
CCNA1-202ENST00000440264 FKBP5Q13451 457 aaPredicted RBP23.6■■□□□ 1.37
CCNA1-202ENST00000440264 ZNF790Q6PG37 636 aa23.6■■□□□ 1.37
CCNA1-202ENST00000440264 GCC1Q96CN9 775 aa23.6■■□□□ 1.37
CCNA1-202ENST00000440264 PRAMEF22A3QJZ6 481 aa23.59■■□□□ 1.37
CCNA1-202ENST00000440264 CEP85Q6P2H3 762 aa23.59■■□□□ 1.37
CCNA1-202ENST00000440264 NFATC2IPQ8NCF5 419 aa23.59■■□□□ 1.37
CCNA1-202ENST00000440264 CHMP4AQ9BY43 222 aa23.58■■□□□ 1.37
CCNA1-202ENST00000440264 PAPPAQ13219 1627 aa23.58■■□□□ 1.36
CCNA1-202ENST00000440264 HSP90AB1P08238 724 aaKnown RBP23.57■■□□□ 1.36
CCNA1-202ENST00000440264 EIF2S2P20042 333 aaKnown RBP23.57■■□□□ 1.36
CCNA1-202ENST00000440264 NKX1-1Q15270 411 aaPredicted RBP23.57■■□□□ 1.36
CCNA1-202ENST00000440264 UBR2Q8IWV8 1755 aa23.57■■□□□ 1.36
CCNA1-202ENST00000440264 PHLPP1O60346 1717 aa23.57■■□□□ 1.36
CCNA1-202ENST00000440264 RPAP2Q8IXW5 612 aaPredicted RBP23.57■■□□□ 1.36
CCNA1-202ENST00000440264 PCDH11XQ9BZA7 1347 aa23.56■■□□□ 1.36
CCNA1-202ENST00000440264 PCDH11YQ9BZA8 1340 aa23.56■■□□□ 1.36
CCNA1-202ENST00000440264 SLC39A6Q13433 755 aa23.56■■□□□ 1.36
CCNA1-202ENST00000440264 SLC4A10Q6U841 1118 aa23.56■■□□□ 1.36
CCNA1-202ENST00000440264 ZCRB1Q8TBF4 217 aaKnown RBP23.56■■□□□ 1.36
CCNA1-202ENST00000440264 DCTPP1Q9H773 170 aa23.56■■□□□ 1.36
CCNA1-202ENST00000440264 TOGARAM1Q9Y4F4 1720 aa23.56■■□□□ 1.36
CCNA1-202ENST00000440264 PLCH1Q4KWH8 1693 aa23.56■■□□□ 1.36
CCNA1-202ENST00000440264 DISP2A7MBM2 1401 aa23.55■■□□□ 1.36
CCNA1-202ENST00000440264 IL2RBP14784 551 aa23.55■■□□□ 1.36
CCNA1-202ENST00000440264 CHD1LQ86WJ1 897 aa23.55■■□□□ 1.36
CCNA1-202ENST00000440264 ADCY9O60503 1353 aa23.55■■□□□ 1.36
CCNA1-202ENST00000440264 PDIA6Q15084 440 aa23.54■■□□□ 1.36
CCNA1-202ENST00000440264 PROSER3Q2NL68 480 aa23.54■■□□□ 1.36
CCNA1-202ENST00000440264 DBF4Q9UBU7 674 aaPredicted RBP23.54■■□□□ 1.36
CCNA1-202ENST00000440264 ANXA1P04083 346 aa23.53■■□□□ 1.36
CCNA1-202ENST00000440264 STRN4Q9NRL3 753 aa23.53■■□□□ 1.36
CCNA1-202ENST00000440264 ZNF496Q96IT1 587 aaPredicted RBP23.52■■□□□ 1.36
CCNA1-202ENST00000440264 BTG4Q9NY30 223 aa23.52■■□□□ 1.36
CCNA1-202ENST00000440264 LAMB4A4D0S4 1761 aa23.52■■□□□ 1.36
CCNA1-202ENST00000440264 WNK3Q9BYP7 1800 aa23.52■■□□□ 1.36
CCNA1-202ENST00000440264 LNPKQ9C0E8 428 aa23.51■■□□□ 1.35
CCNA1-202ENST00000440264 USP44Q9H0E7 712 aa23.51■■□□□ 1.35
CCNA1-202ENST00000440264 NRAPQ86VF7 1730 aa23.51■■□□□ 1.35
CCNA1-202ENST00000440264 EVA1CP58658 441 aa23.5■■□□□ 1.35
CCNA1-202ENST00000440264 BEND3Q5T5X7 828 aa23.5■■□□□ 1.35
CCNA1-202ENST00000440264 LRP10Q7Z4F1 713 aa23.5■■□□□ 1.35
CCNA1-202ENST00000440264 KCPQ6ZWJ8 1503 aa23.49■■□□□ 1.35
CCNA1-202ENST00000440264 PI4KAP2A4QPH2 592 aa23.49■■□□□ 1.35
CCNA1-202ENST00000440264 PI4KAP1Q8N8J0 262 aa23.49■■□□□ 1.35
CCNA1-202ENST00000440264 DDX21Q9NR30 783 aaKnown RBP eCLIP23.49■■□□□ 1.35
CCNA1-202ENST00000440264 ERVV-2B6SEH9 535 aa23.48■■□□□ 1.35
CCNA1-202ENST00000440264 DNAAF4Q8WXU2 420 aa23.48■■□□□ 1.35
CCNA1-202ENST00000440264 TNS2Q63HR2 1409 aa23.48■■□□□ 1.35
CCNA1-202ENST00000440264 GNAI2P04899 355 aa23.47■■□□□ 1.35
CCNA1-202ENST00000440264 GNAI3P08754 354 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms