RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 KDM6AO15550 1401 aaPredicted RBP25.1■■□□□ 1.61
APTR-204ENST00000440088 ADAMTS2O95450 1211 aa25.1■■□□□ 1.61
APTR-204ENST00000440088 DCAF5Q96JK2 942 aa25.1■■□□□ 1.61
APTR-204ENST00000440088 PCDH11XQ9BZA7 1347 aa25.1■■□□□ 1.61
APTR-204ENST00000440088 PCDH11YQ9BZA8 1340 aa25.1■■□□□ 1.61
APTR-204ENST00000440088 SIPA1L3O60292 1781 aaPredicted RBP25.09■■□□□ 1.61
APTR-204ENST00000440088 USP35Q9P2H5 1018 aa25.08■■□□□ 1.61
APTR-204ENST00000440088 EIF4A1P60842 406 aaKnown RBP25.07■■□□□ 1.6
APTR-204ENST00000440088 PLCH1Q4KWH8 1693 aa25.07■■□□□ 1.6
APTR-204ENST00000440088 NUTM2BA6NNL0 878 aaPredicted RBP25.07■■□□□ 1.6
APTR-204ENST00000440088 NUTM2EB1AL46 878 aaPredicted RBP25.07■■□□□ 1.6
APTR-204ENST00000440088 NUTM2AQ8IVF1 878 aaPredicted RBP25.07■■□□□ 1.6
APTR-204ENST00000440088 SLC52A2Q9HAB3 445 aa25.07■■□□□ 1.6
APTR-204ENST00000440088 CCDC30Q5VVM6 783 aa25.05■■□□□ 1.6
APTR-204ENST00000440088 API5Q9BZZ5 524 aaKnown RBP25.05■■□□□ 1.6
APTR-204ENST00000440088 ITPRIPQ8IWB1 547 aa25.05■■□□□ 1.6
APTR-204ENST00000440088 DDX19BQ9UMR2 479 aa25.05■■□□□ 1.6
APTR-204ENST00000440088 JCADQ9P266 1359 aa25.04■■□□□ 1.6
APTR-204ENST00000440088 SLC4A2P04920 1241 aa25.04■■□□□ 1.6
APTR-204ENST00000440088 HOXB7P09629 217 aa25.04■■□□□ 1.6
APTR-204ENST00000440088 TMEM57Q8N5G2 664 aa25.04■■□□□ 1.6
APTR-204ENST00000440088 STK31Q9BXU1 1019 aa25.04■■□□□ 1.6
APTR-204ENST00000440088 KCNQ3O43525 872 aa25.03■■□□□ 1.6
APTR-204ENST00000440088 CHMP4AQ9BY43 222 aa25.03■■□□□ 1.6
APTR-204ENST00000440088 MRC1P22897 1456 aa25.02■■□□□ 1.6
APTR-204ENST00000440088 PTPRCP08575 1304 aa25.02■■□□□ 1.6
APTR-204ENST00000440088 NFATC2IPQ8NCF5 419 aa25.02■■□□□ 1.6
APTR-204ENST00000440088 ABCC4O15439 1325 aa25.01■■□□□ 1.59
APTR-204ENST00000440088 CACNA1FO60840 1977 aa25.01■■□□□ 1.59
APTR-204ENST00000440088 SHANK3Q9BYB0 1731 aa25■■□□□ 1.59
APTR-204ENST00000440088 HDGFL1Q5TGJ6 251 aa25■■□□□ 1.59
APTR-204ENST00000440088 NRAPQ86VF7 1730 aa25■■□□□ 1.59
APTR-204ENST00000440088 NKX1-1Q15270 411 aaPredicted RBP24.99■■□□□ 1.59
APTR-204ENST00000440088 NWD2Q9ULI1 1742 aa24.99■■□□□ 1.59
APTR-204ENST00000440088 DISP2A7MBM2 1401 aa24.98■■□□□ 1.59
APTR-204ENST00000440088 ZNF790Q6PG37 636 aa24.98■■□□□ 1.59
APTR-204ENST00000440088 DDX54Q8TDD1 881 aaKnown RBP24.98■■□□□ 1.59
APTR-204ENST00000440088 CABP4P57796 275 aa24.98■■□□□ 1.59
APTR-204ENST00000440088 CENPQQ7L2Z9 268 aaPredicted RBP24.98■■□□□ 1.59
APTR-204ENST00000440088 HEG1Q9ULI3 1381 aa24.98■■□□□ 1.59
APTR-204ENST00000440088 KDM2BQ8NHM5 1336 aa24.97■■□□□ 1.59
APTR-204ENST00000440088 NECTIN2Q92692 538 aa24.97■■□□□ 1.59
APTR-204ENST00000440088 SLIT2O94813 1529 aa24.97■■□□□ 1.59
APTR-204ENST00000440088 CHMP4BQ9H444 224 aaKnown RBP24.96■■□□□ 1.59
APTR-204ENST00000440088 ERVV-2B6SEH9 535 aa24.95■■□□□ 1.58
APTR-204ENST00000440088 GIGYF1O75420 1035 aaPredicted RBP24.95■■□□□ 1.58
APTR-204ENST00000440088 RGS12O14924 1447 aa24.95■■□□□ 1.58
APTR-204ENST00000440088 EIF2S2P20042 333 aaKnown RBP24.94■■□□□ 1.58
APTR-204ENST00000440088 SLC39A6Q13433 755 aa24.94■■□□□ 1.58
APTR-204ENST00000440088 THRAP3Q9Y2W1 955 aaKnown RBP24.94■■□□□ 1.58
APTR-204ENST00000440088 SPATA31A1Q5TZJ5 1347 aa24.94■■□□□ 1.58
APTR-204ENST00000440088 SPATA31A6Q5VVP1 1343 aa24.94■■□□□ 1.58
APTR-204ENST00000440088 G2E3Q7L622 706 aa24.93■■□□□ 1.58
APTR-204ENST00000440088 WNK3Q9BYP7 1800 aa24.93■■□□□ 1.58
APTR-204ENST00000440088 TTC5Q8N0Z6 440 aa24.93■■□□□ 1.58
APTR-204ENST00000440088 CDCA7Q9BWT1 371 aaPredicted RBP24.93■■□□□ 1.58
APTR-204ENST00000440088 ZBTB40Q9NUA8 1239 aa24.93■■□□□ 1.58
APTR-204ENST00000440088 FLIIQ13045 1269 aa24.92■■□□□ 1.58
APTR-204ENST00000440088 PCDHB15Q9Y5E8 787 aa24.92■■□□□ 1.58
APTR-204ENST00000440088 INTS3Q68E01 1043 aaKnown RBP24.91■■□□□ 1.58
APTR-204ENST00000440088 EXOC5O00471 708 aa24.9■■□□□ 1.58
APTR-204ENST00000440088 ZBTB7BO15156 539 aaPredicted RBP24.9■■□□□ 1.58
APTR-204ENST00000440088 SPATA31A5Q5VU36 1347 aa24.9■■□□□ 1.58
APTR-204ENST00000440088 SPATA31A7Q8IWB4 1347 aa24.9■■□□□ 1.58
APTR-204ENST00000440088 FKBP5Q13451 457 aaPredicted RBP24.89■■□□□ 1.57
APTR-204ENST00000440088 NGLY1Q96IV0 654 aa24.89■■□□□ 1.57
APTR-204ENST00000440088 C8orf37Q96NL8 207 aa24.89■■□□□ 1.57
APTR-204ENST00000440088 IGHDP01880 384 aa24.88■■□□□ 1.57
APTR-204ENST00000440088 CHPF2Q9P2E5 772 aa24.88■■□□□ 1.57
APTR-204ENST00000440088 DBF4Q9UBU7 674 aaPredicted RBP24.88■■□□□ 1.57
APTR-204ENST00000440088 UNC5CLQ8IV45 518 aa24.88■■□□□ 1.57
APTR-204ENST00000440088 ZNF496Q96IT1 587 aaPredicted RBP24.88■■□□□ 1.57
APTR-204ENST00000440088 TNS2Q63HR2 1409 aa24.87■■□□□ 1.57
APTR-204ENST00000440088 FMNL2Q96PY5 1086 aa24.87■■□□□ 1.57
APTR-204ENST00000440088 CCDC9Q9Y3X0 531 aaKnown RBP24.87■■□□□ 1.57
APTR-204ENST00000440088 HSPA1LP34931 641 aa24.86■■□□□ 1.57
APTR-204ENST00000440088 RWDD1Q9H446 243 aaPredicted RBP24.86■■□□□ 1.57
APTR-204ENST00000440088 PRAMEF22A3QJZ6 481 aa24.86■■□□□ 1.57
APTR-204ENST00000440088 TOGARAM1Q9Y4F4 1720 aa24.85■■□□□ 1.57
APTR-204ENST00000440088 F6X3S4 739 aa24.85■■□□□ 1.57
APTR-204ENST00000440088 SNRPA1P09661 255 aaKnown RBP24.85■■□□□ 1.57
APTR-204ENST00000440088 PHAXQ9H814 394 aaKnown RBP24.85■■□□□ 1.57
APTR-204ENST00000440088 CCT4P50991 539 aaKnown RBP24.84■■□□□ 1.57
APTR-204ENST00000440088 BARGINQ6ZT62 677 aa24.84■■□□□ 1.57
APTR-204ENST00000440088 LRP6O75581 1613 aa24.83■■□□□ 1.57
APTR-204ENST00000440088 SLC4A10Q6U841 1118 aa24.83■■□□□ 1.57
APTR-204ENST00000440088 FNBP4Q8N3X1 1017 aaPredicted RBP24.83■■□□□ 1.57
APTR-204ENST00000440088 TMOD3Q9NYL9 352 aa24.83■■□□□ 1.57
APTR-204ENST00000440088 C5P01031 1676 aa24.83■■□□□ 1.57
APTR-204ENST00000440088 BCL9LQ86UU0 1499 aa24.83■■□□□ 1.57
APTR-204ENST00000440088 DDB1Q16531 1140 aa24.83■■□□□ 1.56
APTR-204ENST00000440088 PAPPAQ13219 1627 aa24.81■■□□□ 1.56
APTR-204ENST00000440088 HDAC1Q13547 482 aaPredicted RBP24.81■■□□□ 1.56
APTR-204ENST00000440088 VPS72Q15906 364 aa24.81■■□□□ 1.56
APTR-204ENST00000440088 HYPKQ9NX55 129 aa24.81■■□□□ 1.56
APTR-204ENST00000440088 UBR2Q8IWV8 1755 aa24.81■■□□□ 1.56
APTR-204ENST00000440088 PXDNLA1KZ92 1463 aa24.8■■□□□ 1.56
APTR-204ENST00000440088 DDX21Q9NR30 783 aaKnown RBP eCLIP24.8■■□□□ 1.56
APTR-204ENST00000440088 ANXA1P04083 346 aa24.79■■□□□ 1.56
APTR-204ENST00000440088 GLI3P10071 1580 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms