RNA–Protein interactions for RNA: ENST00000439649.7

GFRA1-204, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GFRA1, Length 9,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-204ENST00000439649 MCM4P33991 863 aa14.22□□□□□ -0.13
GFRA1-204ENST00000439649 PDRG1Q9NUG6 133 aa14.22□□□□□ -0.13
GFRA1-204ENST00000439649 TOP1P11387 765 aaKnown RBP14.22□□□□□ -0.13
GFRA1-204ENST00000439649 TWISTNBQ3B726 338 aaPredicted RBP14.22□□□□□ -0.13
GFRA1-204ENST00000439649 NUTM2FA1L443 756 aa14.21□□□□□ -0.13
GFRA1-204ENST00000439649 DCAF8L1A6NGE4 600 aa14.21□□□□□ -0.13
GFRA1-204ENST00000439649 HSPA4P34932 840 aa14.21□□□□□ -0.13
GFRA1-204ENST00000439649 TMEM266Q2M3C6 531 aa14.21□□□□□ -0.13
GFRA1-204ENST00000439649 ANKRD30BQ9BXX2 1392 aa14.21□□□□□ -0.13
GFRA1-204ENST00000439649 CHD1LQ86WJ1 897 aa14.21□□□□□ -0.13
GFRA1-204ENST00000439649 STX1AQ16623 288 aa14.21□□□□□ -0.13
GFRA1-204ENST00000439649 RAB11FIP3O75154 756 aa14.21□□□□□ -0.14
GFRA1-204ENST00000439649 CCDC97Q96F63 343 aaPredicted RBP14.21□□□□□ -0.14
GFRA1-204ENST00000439649 KANK3Q6NY19 840 aa14.21□□□□□ -0.14
GFRA1-204ENST00000439649 SMARCC1Q92922 1105 aaPredicted RBP14.21□□□□□ -0.14
GFRA1-204ENST00000439649 RBM10P98175 930 aaKnown RBP14.2□□□□□ -0.14
GFRA1-204ENST00000439649 NUTM2DQ5VT03 806 aaPredicted RBP14.2□□□□□ -0.14
GFRA1-204ENST00000439649 TDO2P48775 406 aa14.2□□□□□ -0.14
GFRA1-204ENST00000439649 CACNA2D4Q7Z3S7 1137 aa14.2□□□□□ -0.14
GFRA1-204ENST00000439649 TUBBP07437 444 aa14.2□□□□□ -0.14
GFRA1-204ENST00000439649 TCP11L2Q8N4U5 519 aa14.2□□□□□ -0.14
GFRA1-204ENST00000439649 ZHX3Q9H4I2 956 aa14.2□□□□□ -0.14
GFRA1-204ENST00000439649 CASTP20810 708 aaKnown RBP14.2□□□□□ -0.14
GFRA1-204ENST00000439649 SEPT6Q14141 434 aa14.2□□□□□ -0.14
GFRA1-204ENST00000439649 CCDC12Q8WUD4 166 aaPredicted RBP14.2□□□□□ -0.14
GFRA1-204ENST00000439649 PRPHP41219 470 aa14.2□□□□□ -0.14
GFRA1-204ENST00000439649 DDX23Q9BUQ8 820 aaKnown RBP14.2□□□□□ -0.14
GFRA1-204ENST00000439649 NLRP2Q9NX02 1062 aa14.2□□□□□ -0.14
GFRA1-204ENST00000439649 HDGFL1Q5TGJ6 251 aa14.2□□□□□ -0.14
GFRA1-204ENST00000439649 LRRC45Q96CN5 670 aa14.2□□□□□ -0.14
GFRA1-204ENST00000439649 TIGD1Q96MW7 591 aa14.2□□□□□ -0.14
GFRA1-204ENST00000439649 ABCC11Q96J66 1382 aa14.2□□□□□ -0.14
GFRA1-204ENST00000439649 CCDC171Q6TFL3 1326 aa14.19□□□□□ -0.14
GFRA1-204ENST00000439649 AIMP1Q12904 312 aaKnown RBP14.19□□□□□ -0.14
GFRA1-204ENST00000439649 STXBP4Q6ZWJ1 553 aa14.19□□□□□ -0.14
GFRA1-204ENST00000439649 SYCE3A1L190 88 aa14.19□□□□□ -0.14
GFRA1-204ENST00000439649 TSNARE1Q96NA8 513 aa14.19□□□□□ -0.14
GFRA1-204ENST00000439649 NUP88Q99567 741 aaPredicted RBP14.19□□□□□ -0.14
GFRA1-204ENST00000439649 DDX46Q7L014 1031 aaKnown RBP14.19□□□□□ -0.14
GFRA1-204ENST00000439649 CKAP4Q07065 602 aaKnown RBP14.19□□□□□ -0.14
GFRA1-204ENST00000439649 EHMT1Q9H9B1 1298 aa14.19□□□□□ -0.14
GFRA1-204ENST00000439649 CLIP2Q9UDT6 1046 aa14.19□□□□□ -0.14
GFRA1-204ENST00000439649 ATAD2Q6PL18 1390 aa14.19□□□□□ -0.14
GFRA1-204ENST00000439649 HMOX1P09601 288 aa14.19□□□□□ -0.14
GFRA1-204ENST00000439649 SSR1P43307 286 aaKnown RBP14.19□□□□□ -0.14
GFRA1-204ENST00000439649 MATR3P43243 847 aaKnown RBP eCLIP14.18□□□□□ -0.14
GFRA1-204ENST00000439649 GTPBP4Q9BZE4 634 aaKnown RBP14.18□□□□□ -0.14
GFRA1-204ENST00000439649 TTC12Q9H892 705 aaPredicted RBP14.18□□□□□ -0.14
GFRA1-204ENST00000439649 FMNL3Q8IVF7 1028 aa14.18□□□□□ -0.14
GFRA1-204ENST00000439649 DDX19AQ9NUU7 478 aaKnown RBP14.18□□□□□ -0.14
GFRA1-204ENST00000439649 AKNAQ7Z591 1439 aa14.18□□□□□ -0.14
GFRA1-204ENST00000439649 EIF2AK4Q9P2K8 1649 aaKnown RBP14.18□□□□□ -0.14
GFRA1-204ENST00000439649 SAMD1Q6SPF0 538 aaPredicted RBP14.18□□□□□ -0.14
GFRA1-204ENST00000439649 EPRSP07814 1512 aaKnown RBP14.18□□□□□ -0.14
GFRA1-204ENST00000439649 SPECC1Q5M775 1068 aa14.18□□□□□ -0.14
GFRA1-204ENST00000439649 USP37Q86T82 979 aa14.18□□□□□ -0.14
GFRA1-204ENST00000439649 SRRTQ9BXP5 876 aaKnown RBP14.18□□□□□ -0.14
GFRA1-204ENST00000439649 AKAP2Q9Y2D5 859 aa14.18□□□□□ -0.14
GFRA1-204ENST00000439649 ZNF76P36508 570 aa14.18□□□□□ -0.14
GFRA1-204ENST00000439649 A0A087WZG4 1122 aa14.18□□□□□ -0.14
GFRA1-204ENST00000439649 RASAL2Q9UJF2 1139 aa14.18□□□□□ -0.14
GFRA1-204ENST00000439649 CCDC113Q9H0I3 377 aa14.17□□□□□ -0.14
GFRA1-204ENST00000439649 ACTN2P35609 894 aa14.17□□□□□ -0.14
GFRA1-204ENST00000439649 AMPD3Q01432 767 aa14.17□□□□□ -0.14
GFRA1-204ENST00000439649 C9orf84Q5VXU9 1444 aa14.17□□□□□ -0.14
GFRA1-204ENST00000439649 PDZRN3Q9UPQ7 1066 aa14.17□□□□□ -0.14
GFRA1-204ENST00000439649 PTPN23Q9H3S7 1636 aa14.17□□□□□ -0.14
GFRA1-204ENST00000439649 CTNNA2P26232 953 aa14.17□□□□□ -0.14
GFRA1-204ENST00000439649 FGD5Q6ZNL6 1462 aa14.16□□□□□ -0.14
GFRA1-204ENST00000439649 LARP1Q6PKG0 1096 aaKnown RBP14.16□□□□□ -0.14
GFRA1-204ENST00000439649 PABPN1LA6NDY0 278 aaKnown RBP14.16□□□□□ -0.14
GFRA1-204ENST00000439649 MTHFSP49914 203 aa14.16□□□□□ -0.14
GFRA1-204ENST00000439649 KIF4BQ2VIQ3 1234 aa14.16□□□□□ -0.14
GFRA1-204ENST00000439649 AACSQ86V21 672 aa14.16□□□□□ -0.14
GFRA1-204ENST00000439649 LRRC27Q9C0I9 530 aa14.16□□□□□ -0.14
GFRA1-204ENST00000439649 CTAGE1Q96RT6 745 aa14.16□□□□□ -0.14
GFRA1-204ENST00000439649 RNF41Q9H4P4 317 aaPredicted RBP14.16□□□□□ -0.14
GFRA1-204ENST00000439649 GLRX3O76003 335 aaKnown RBP14.16□□□□□ -0.14
GFRA1-204ENST00000439649 KRT222Q8N1A0 295 aa14.16□□□□□ -0.14
GFRA1-204ENST00000439649 JPH4Q96JJ6 628 aa14.16□□□□□ -0.14
GFRA1-204ENST00000439649 ERBINQ96RT1 1412 aa14.16□□□□□ -0.14
GFRA1-204ENST00000439649 AIDAQ96BJ3 306 aa14.16□□□□□ -0.14
GFRA1-204ENST00000439649 MNAT1P51948 309 aa14.15□□□□□ -0.14
GFRA1-204ENST00000439649 DAAM2Q86T65 1068 aa14.15□□□□□ -0.14
GFRA1-204ENST00000439649 BMS1Q14692 1282 aaKnown RBP14.15□□□□□ -0.14
GFRA1-204ENST00000439649 CCDC178Q5BJE1 867 aa14.15□□□□□ -0.14
GFRA1-204ENST00000439649 ARFGAP3Q9NP61 516 aa14.15□□□□□ -0.14
GFRA1-204ENST00000439649 NOB1Q9ULX3 412 aaKnown RBP14.15□□□□□ -0.14
GFRA1-204ENST00000439649 ATP2B2Q01814 1243 aa14.15□□□□□ -0.14
GFRA1-204ENST00000439649 TOP2BQ02880 1626 aa14.15□□□□□ -0.14
GFRA1-204ENST00000439649 KIAA1107Q9UPP5 1409 aa14.15□□□□□ -0.14
GFRA1-204ENST00000439649 NUP133Q8WUM0 1156 aa14.15□□□□□ -0.14
GFRA1-204ENST00000439649 ZNF692Q9BU19 519 aaPredicted RBP14.14□□□□□ -0.15
GFRA1-204ENST00000439649 GOPCQ9HD26 462 aa14.14□□□□□ -0.15
GFRA1-204ENST00000439649 ADAMTS8Q9UP79 889 aa14.14□□□□□ -0.15
GFRA1-204ENST00000439649 SSBP05455 408 aaKnown RBP eCLIP14.14□□□□□ -0.15
GFRA1-204ENST00000439649 A6NNZ2 444 aa14.14□□□□□ -0.15
GFRA1-204ENST00000439649 TUBB8Q3ZCM7 444 aa14.14□□□□□ -0.15
GFRA1-204ENST00000439649 SLF2Q8IX21 1173 aa14.14□□□□□ -0.15
GFRA1-204ENST00000439649 JAKMIP1Q96N16 626 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms