RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 MSL1Q68DK7 614 aa13.67□□□□□ -0.22
CCDC66-207ENST00000439445 FLT4P35916 1363 aa13.67□□□□□ -0.22
CCDC66-207ENST00000439445 PPM1GO15355 546 aaPredicted RBP13.66□□□□□ -0.22
CCDC66-207ENST00000439445 CYP27B1O15528 508 aa13.66□□□□□ -0.22
CCDC66-207ENST00000439445 HMGB2P26583 209 aaKnown RBP13.66□□□□□ -0.22
CCDC66-207ENST00000439445 C1QTNF8P60827 252 aa13.66□□□□□ -0.22
CCDC66-207ENST00000439445 PHF12Q96QT6 1004 aa13.66□□□□□ -0.22
CCDC66-207ENST00000439445 CARD14Q9BXL6 1004 aa13.66□□□□□ -0.22
CCDC66-207ENST00000439445 TSPYL2Q9H2G4 693 aaPredicted RBP13.66□□□□□ -0.22
CCDC66-207ENST00000439445 EMILIN1Q9Y6C2 1016 aa13.66□□□□□ -0.22
CCDC66-207ENST00000439445 KIF24Q5T7B8 1368 aa13.66□□□□□ -0.22
CCDC66-207ENST00000439445 CEP350Q5VT06 3117 aa13.65□□□□□ -0.22
CCDC66-207ENST00000439445 KIF20BQ96Q89 1820 aa13.65□□□□□ -0.22
CCDC66-207ENST00000439445 SENP3-EIF4A1A0A087X0R7 540 aa13.65□□□□□ -0.22
CCDC66-207ENST00000439445 FLAD1Q8NFF5 587 aa13.65□□□□□ -0.22
CCDC66-207ENST00000439445 PALLDQ8WX93 1383 aa13.64□□□□□ -0.23
CCDC66-207ENST00000439445 GRIN3BO60391 1043 aa13.64□□□□□ -0.23
CCDC66-207ENST00000439445 VASPP50552 380 aaPredicted RBP13.64□□□□□ -0.23
CCDC66-207ENST00000439445 TRIM26Q12899 539 aaPredicted RBP13.64□□□□□ -0.23
CCDC66-207ENST00000439445 YBX3P16989 372 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC66-207ENST00000439445 SMARCC1Q92922 1105 aaPredicted RBP13.63□□□□□ -0.23
CCDC66-207ENST00000439445 SPG7Q9UQ90 795 aa13.63□□□□□ -0.23
CCDC66-207ENST00000439445 C5P01031 1676 aa13.63□□□□□ -0.23
CCDC66-207ENST00000439445 GIGYF1O75420 1035 aaPredicted RBP13.62□□□□□ -0.23
CCDC66-207ENST00000439445 PIGBQ92521 554 aa13.62□□□□□ -0.23
CCDC66-207ENST00000439445 AK7Q96M32 723 aa13.62□□□□□ -0.23
CCDC66-207ENST00000439445 NSD3Q9BZ95 1437 aa13.62□□□□□ -0.23
CCDC66-207ENST00000439445 RASEFQ8IZ41 740 aa13.61□□□□□ -0.23
CCDC66-207ENST00000439445 CD2APQ9Y5K6 639 aa13.61□□□□□ -0.23
CCDC66-207ENST00000439445 ITGB4P16144 1822 aa13.61□□□□□ -0.23
CCDC66-207ENST00000439445 TAF1LQ8IZX4 1826 aa13.61□□□□□ -0.23
CCDC66-207ENST00000439445 PHF14O94880 888 aa13.6□□□□□ -0.23
CCDC66-207ENST00000439445 NKX1-1Q15270 411 aaPredicted RBP13.6□□□□□ -0.23
CCDC66-207ENST00000439445 EYA1Q99502 592 aa13.6□□□□□ -0.23
CCDC66-207ENST00000439445 WASHC2AQ641Q2 1341 aa13.6□□□□□ -0.23
CCDC66-207ENST00000439445 SMIM5Q71RC9 77 aa13.59□□□□□ -0.23
CCDC66-207ENST00000439445 POLR3GLQ9BT43 218 aa13.59□□□□□ -0.23
CCDC66-207ENST00000439445 MAP2P11137 1827 aaKnown RBP13.59□□□□□ -0.23
CCDC66-207ENST00000439445 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.58□□□□□ -0.24
CCDC66-207ENST00000439445 LOC102724428A0A0B4J2F2 783 aa13.58□□□□□ -0.24
CCDC66-207ENST00000439445 SIK1P57059 783 aa13.58□□□□□ -0.24
CCDC66-207ENST00000439445 AMIGO3Q86WK7 504 aa13.58□□□□□ -0.24
CCDC66-207ENST00000439445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.58□□□□□ -0.245e-7■■■■■ 29
CCDC66-207ENST00000439445 TMOD3Q9NYL9 352 aa13.58□□□□□ -0.24
CCDC66-207ENST00000439445 POLKQ9UBT6 870 aa13.58□□□□□ -0.24
CCDC66-207ENST00000439445 C4BP0C0L5 1744 aa13.58□□□□□ -0.24
CCDC66-207ENST00000439445 PKD1L3Q7Z443 1732 aa13.58□□□□□ -0.24
CCDC66-207ENST00000439445 TOGARAM1Q9Y4F4 1720 aa13.58□□□□□ -0.24
CCDC66-207ENST00000439445 GALR2O43603 387 aaPredicted RBP13.57□□□□□ -0.24
CCDC66-207ENST00000439445 TNNT2P45379 298 aaPredicted RBP13.57□□□□□ -0.24
CCDC66-207ENST00000439445 TIMELESSQ9UNS1 1208 aa13.57□□□□□ -0.24
CCDC66-207ENST00000439445 NUBP1P53384 320 aa13.56□□□□□ -0.24
CCDC66-207ENST00000439445 IFNL2Q8IZJ0 200 aa13.56□□□□□ -0.24
CCDC66-207ENST00000439445 LINC00116Q8NCU8 138 aa13.56□□□□□ -0.24
CCDC66-207ENST00000439445 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
CCDC66-207ENST00000439445 ASAP1Q9ULH1 1129 aa13.56□□□□□ -0.24
CCDC66-207ENST00000439445 NCAPD2Q15021 1401 aa13.56□□□□□ -0.24
CCDC66-207ENST00000439445 PHKG2P15735 406 aa13.55□□□□□ -0.24
CCDC66-207ENST00000439445 SSFA2P28290 1259 aa13.55□□□□□ -0.24
CCDC66-207ENST00000439445 ATP6V1AP38606 617 aa13.55□□□□□ -0.24
CCDC66-207ENST00000439445 WWC3Q9ULE0 1092 aa13.55□□□□□ -0.24
CCDC66-207ENST00000439445 UBR3Q6ZT12 1888 aa13.55□□□□□ -0.24
CCDC66-207ENST00000439445 ANKRD26Q9UPS8 1709 aa13.54□□□□□ -0.24
CCDC66-207ENST00000439445 GNPATO15228 680 aa13.54□□□□□ -0.24
CCDC66-207ENST00000439445 ITPK1Q13572 414 aa13.54□□□□□ -0.24
CCDC66-207ENST00000439445 EIF4A2Q14240 407 aaKnown RBP13.54□□□□□ -0.24
CCDC66-207ENST00000439445 PCGF6Q9BYE7 350 aa13.53□□□□□ -0.24
CCDC66-207ENST00000439445 ATG3Q9NT62 314 aa13.53□□□□□ -0.24
CCDC66-207ENST00000439445 IGSF1Q8N6C5 1336 aa13.53□□□□□ -0.24
CCDC66-207ENST00000439445 ATP10DQ9P241 1426 aa13.53□□□□□ -0.24
CCDC66-207ENST00000439445 GPBP1L1Q9HC44 474 aaPredicted RBP13.52□□□□□ -0.25
CCDC66-207ENST00000439445 ZNF526Q8TF50 670 aaPredicted RBP13.51□□□□□ -0.25
CCDC66-207ENST00000439445 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
CCDC66-207ENST00000439445 ERVV-2B6SEH9 535 aa13.5□□□□□ -0.25
CCDC66-207ENST00000439445 MMP10P09238 476 aa13.5□□□□□ -0.25
CCDC66-207ENST00000439445 POTEIP0CG38 1075 aa13.5□□□□□ -0.25
CCDC66-207ENST00000439445 RTCBQ9Y3I0 505 aaKnown RBP13.5□□□□□ -0.25
CCDC66-207ENST00000439445 HSP90AB1P08238 724 aaKnown RBP13.49□□□□□ -0.25
CCDC66-207ENST00000439445 PLEKHO1Q53GL0 409 aaPredicted RBP13.49□□□□□ -0.25
CCDC66-207ENST00000439445 TRAPPC3LQ5T215 181 aa13.49□□□□□ -0.25
CCDC66-207ENST00000439445 MS4A3Q96HJ5 214 aa13.49□□□□□ -0.25
CCDC66-207ENST00000439445 PANK3Q9H999 370 aa13.49□□□□□ -0.25
CCDC66-207ENST00000439445 CLSPNQ9HAW4 1339 aa13.48□□□□□ -0.25
CCDC66-207ENST00000439445 CABP4P57796 275 aa13.48□□□□□ -0.25
CCDC66-207ENST00000439445 EIF4G2P78344 907 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC66-207ENST00000439445 NLGN1Q8N2Q7 840 aa13.48□□□□□ -0.25
CCDC66-207ENST00000439445 DCAF5Q96JK2 942 aa13.48□□□□□ -0.25
CCDC66-207ENST00000439445 SLC4A9Q96Q91 983 aa13.48□□□□□ -0.25
CCDC66-207ENST00000439445 HSPA5P11021 654 aaKnown RBP13.47□□□□□ -0.25
CCDC66-207ENST00000439445 ZNF530Q6P9A1 599 aaPredicted RBP13.47□□□□□ -0.25
CCDC66-207ENST00000439445 KIF12Q96FN5 646 aa13.47□□□□□ -0.25
CCDC66-207ENST00000439445 RFC4P35249 363 aa13.46□□□□□ -0.25
CCDC66-207ENST00000439445 MTHFSP49914 203 aa13.46□□□□□ -0.25
CCDC66-207ENST00000439445 AMOTQ4VCS5 1084 aa13.46□□□□□ -0.25
CCDC66-207ENST00000439445 RC3H1Q5TC82 1133 aaKnown RBP13.46□□□□□ -0.25
CCDC66-207ENST00000439445 MORC1Q86VD1 984 aa13.46□□□□□ -0.25
CCDC66-207ENST00000439445 ARHGEF1Q92888 912 aaKnown RBP13.46□□□□□ -0.25
CCDC66-207ENST00000439445 ADCY9O60503 1353 aa13.45□□□□□ -0.26
CCDC66-207ENST00000439445 PLEKHG2Q9H7P9 1386 aa13.45□□□□□ -0.26
CCDC66-207ENST00000439445 A0A0G2JLW4 131 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms