RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 TMEM151AQ8N4L1 468 aa6.81□□□□□ -1.32
HMGB1P18-201ENST00000438801 GDF11O95390 407 aa6.8□□□□□ -1.32
HMGB1P18-201ENST00000438801 PRKCSHP14314 528 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P18-201ENST00000438801 MCM6Q14566 821 aa6.8□□□□□ -1.32
HMGB1P18-201ENST00000438801 GNASQ5JWF2 1037 aa6.8□□□□□ -1.32
HMGB1P18-201ENST00000438801 KCTD17Q8N5Z5 321 aa6.8□□□□□ -1.32
HMGB1P18-201ENST00000438801 SIRT1Q96EB6 747 aa6.8□□□□□ -1.32
HMGB1P18-201ENST00000438801 ETNK1Q9HBU6 452 aa6.8□□□□□ -1.32
HMGB1P18-201ENST00000438801 ENAMQ9NRM1 1142 aa6.8□□□□□ -1.32
HMGB1P18-201ENST00000438801 A0A1B0GTH6 734 aa6.79□□□□□ -1.32
HMGB1P18-201ENST00000438801 STAU1O95793 577 aaKnown RBP6.79□□□□□ -1.32
HMGB1P18-201ENST00000438801 MX2P20592 715 aa6.79□□□□□ -1.32
HMGB1P18-201ENST00000438801 C4orf17Q53FE4 359 aa6.79□□□□□ -1.32
HMGB1P18-201ENST00000438801 SCARF2Q96GP6 870 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P18-201ENST00000438801 GPAMQ9HCL2 828 aa6.79□□□□□ -1.32
HMGB1P18-201ENST00000438801 THBS1P07996 1170 aa6.78□□□□□ -1.32
HMGB1P18-201ENST00000438801 IRS1P35568 1242 aa6.78□□□□□ -1.32
HMGB1P18-201ENST00000438801 SOX11P35716 441 aa6.78□□□□□ -1.32
HMGB1P18-201ENST00000438801 SEMA3FQ13275 785 aa6.78□□□□□ -1.32
HMGB1P18-201ENST00000438801 TLR1Q15399 786 aa6.78□□□□□ -1.32
HMGB1P18-201ENST00000438801 MAP7D1Q3KQU3 841 aa6.78□□□□□ -1.32
HMGB1P18-201ENST00000438801 NSFL1CQ9UNZ2 370 aaKnown RBP6.78□□□□□ -1.32
HMGB1P18-201ENST00000438801 PPARGC1BQ86YN6 1023 aaKnown RBP6.77□□□□□ -1.33
HMGB1P18-201ENST00000438801 PLPP7Q8NBV4 271 aa6.77□□□□□ -1.33
HMGB1P18-201ENST00000438801 RHBDD1Q8TEB9 315 aa6.77□□□□□ -1.33
HMGB1P18-201ENST00000438801 ACDQ96AP0 544 aa6.77□□□□□ -1.33
HMGB1P18-201ENST00000438801 CFHR5Q9BXR6 569 aa6.77□□□□□ -1.33
HMGB1P18-201ENST00000438801 CSB-PGBD3P0DP91 1061 aa6.76□□□□□ -1.33
HMGB1P18-201ENST00000438801 BCRP11274 1271 aa6.76□□□□□ -1.33
HMGB1P18-201ENST00000438801 MSX1P28360 303 aa6.76□□□□□ -1.33
HMGB1P18-201ENST00000438801 SCNN1DP51172 638 aa6.76□□□□□ -1.33
HMGB1P18-201ENST00000438801 GDF10P55107 478 aa6.76□□□□□ -1.33
HMGB1P18-201ENST00000438801 LBRQ14739 615 aaKnown RBP6.76□□□□□ -1.33
HMGB1P18-201ENST00000438801 KANK3Q6NY19 840 aa6.76□□□□□ -1.33
HMGB1P18-201ENST00000438801 PGBD3Q8N328 593 aa6.76□□□□□ -1.33
HMGB1P18-201ENST00000438801 COG6Q9Y2V7 657 aa6.76□□□□□ -1.33
HMGB1P18-201ENST00000438801 INHAP05111 366 aa6.75□□□□□ -1.33
HMGB1P18-201ENST00000438801 RUBCNLQ9H714 662 aa6.75□□□□□ -1.33
HMGB1P18-201ENST00000438801 PHF24Q9UPV7 400 aa6.75□□□□□ -1.33
HMGB1P18-201ENST00000438801 MAP2K3P46734 347 aa6.74□□□□□ -1.33
HMGB1P18-201ENST00000438801 UBAP2LQ14157 1087 aaKnown RBP6.74□□□□□ -1.33
HMGB1P18-201ENST00000438801 EFHC2Q5JST6 749 aa6.74□□□□□ -1.33
HMGB1P18-201ENST00000438801 NEDD1Q8NHV4 660 aa6.74□□□□□ -1.33
HMGB1P18-201ENST00000438801 LRRC4BQ9NT99 713 aa6.74□□□□□ -1.33
HMGB1P18-201ENST00000438801 PLA2G4AP47712 749 aa6.73□□□□□ -1.33
HMGB1P18-201ENST00000438801 SMTNP53814 917 aa6.73□□□□□ -1.33
HMGB1P18-201ENST00000438801 DNMT3AQ9Y6K1 912 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P18-201ENST00000438801 CNTNAP5Q8WYK1 1306 aa6.73□□□□□ -1.33
HMGB1P18-201ENST00000438801 PHF20L1A8MW92 1017 aa6.72□□□□□ -1.33
HMGB1P18-201ENST00000438801 PIK3CDO00329 1044 aa6.72□□□□□ -1.33
HMGB1P18-201ENST00000438801 OIP5O43482 229 aa6.72□□□□□ -1.33
HMGB1P18-201ENST00000438801 TBC1D9Q6ZT07 1266 aa6.72□□□□□ -1.33
HMGB1P18-201ENST00000438801 OXCT2Q9BYC2 517 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P18-201ENST00000438801 NIFKQ9BYG3 293 aaKnown RBP6.72□□□□□ -1.33
HMGB1P18-201ENST00000438801 CRISPLD1Q9H336 500 aa6.72□□□□□ -1.33
HMGB1P18-201ENST00000438801 SERTAD1Q9UHV2 236 aa6.72□□□□□ -1.33
HMGB1P18-201ENST00000438801 ATXN7L1Q9ULK2 861 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P18-201ENST00000438801 TMEM229AB2RXF0 380 aa6.71□□□□□ -1.34
HMGB1P18-201ENST00000438801 SKIP12755 728 aa6.71□□□□□ -1.34
HMGB1P18-201ENST00000438801 EML3Q32P44 896 aa6.71□□□□□ -1.34
HMGB1P18-201ENST00000438801 WWC1Q8IX03 1113 aa6.71□□□□□ -1.34
HMGB1P18-201ENST00000438801 BEND7Q8N7W2 519 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P18-201ENST00000438801 KLRG1Q96E93 195 aa6.71□□□□□ -1.34
HMGB1P18-201ENST00000438801 ALG2Q9H553 416 aa6.71□□□□□ -1.34
HMGB1P18-201ENST00000438801 PODNQ7Z5L7 613 aa6.7□□□□□ -1.34
HMGB1P18-201ENST00000438801 C1orf216Q8TAB5 229 aa6.7□□□□□ -1.34
HMGB1P18-201ENST00000438801 AIDAQ96BJ3 306 aa6.7□□□□□ -1.34
HMGB1P18-201ENST00000438801 ABHD17AQ96GS6 310 aa6.7□□□□□ -1.34
HMGB1P18-201ENST00000438801 POM121Q96HA1 1249 aa6.7□□□□□ -1.34
HMGB1P18-201ENST00000438801 SLC4A9Q96Q91 983 aa6.7□□□□□ -1.34
HMGB1P18-201ENST00000438801 NDFIP2Q9NV92 336 aa6.7□□□□□ -1.34
HMGB1P18-201ENST00000438801 PCDHGA11Q9Y5H2 935 aa6.7□□□□□ -1.34
HMGB1P18-201ENST00000438801 ABCC9O60706 1549 aa6.7□□□□□ -1.34
HMGB1P18-201ENST00000438801 A6NJY4 79 aa6.69□□□□□ -1.34
HMGB1P18-201ENST00000438801 RAD21O60216 631 aa6.69□□□□□ -1.34
HMGB1P18-201ENST00000438801 BNIP3LO60238 219 aa6.69□□□□□ -1.34
HMGB1P18-201ENST00000438801 LZTS3O60299 673 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P18-201ENST00000438801 BMP4P12644 408 aa6.69□□□□□ -1.34
HMGB1P18-201ENST00000438801 ATP4AP20648 1035 aa6.69□□□□□ -1.34
HMGB1P18-201ENST00000438801 FGFR3P22607 806 aa6.69□□□□□ -1.34
HMGB1P18-201ENST00000438801 MTFR1Q15390 333 aa6.69□□□□□ -1.34
HMGB1P18-201ENST00000438801 GPAT2Q6NUI2 795 aa6.69□□□□□ -1.34
HMGB1P18-201ENST00000438801 GALNT6Q8NCL4 622 aa6.69□□□□□ -1.34
HMGB1P18-201ENST00000438801 GDF2Q9UK05 429 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P18-201ENST00000438801 NOD1Q9Y239 953 aa6.69□□□□□ -1.34
HMGB1P18-201ENST00000438801 CDK2AP1O14519 115 aa6.68□□□□□ -1.34
HMGB1P18-201ENST00000438801 C2CD2LO14523 706 aa6.68□□□□□ -1.34
HMGB1P18-201ENST00000438801 FOXK2Q01167 660 aa6.68□□□□□ -1.34
HMGB1P18-201ENST00000438801 CTBSQ01459 385 aa6.68□□□□□ -1.34
HMGB1P18-201ENST00000438801 NCOA4Q13772 614 aa6.68□□□□□ -1.34
HMGB1P18-201ENST00000438801 FIGNL1Q6PIW4 674 aa6.68□□□□□ -1.34
HMGB1P18-201ENST00000438801 C1orf229Q6ZS94 237 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P18-201ENST00000438801 NLRP8Q86W28 1048 aa6.68□□□□□ -1.34
HMGB1P18-201ENST00000438801 ZNF295-AS1Q8N0V1 137 aa6.68□□□□□ -1.34
HMGB1P18-201ENST00000438801 NFATC2IPQ8NCF5 419 aa6.68□□□□□ -1.34
HMGB1P18-201ENST00000438801 ZCCHC2Q9C0B9 1178 aaKnown RBP6.68□□□□□ -1.34
HMGB1P18-201ENST00000438801 IQSEC3Q9UPP2 1182 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P18-201ENST00000438801 BACH1O14867 736 aa6.67□□□□□ -1.34
HMGB1P18-201ENST00000438801 IGHA1P01876 353 aa6.67□□□□□ -1.34
HMGB1P18-201ENST00000438801 GTF2IP78347 998 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms