RNA–Protein interactions for RNA: ENST00000438610.5

MTA1-208, Transcript of metastasis associated 1, humanhuman

TSL 1 (best)

Gene MTA1, Length 2,144 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-208ENST00000438610 RLBP1P12271 317 aa23.69■■□□□ 1.38
MTA1-208ENST00000438610 EIF4A1P60842 406 aaKnown RBP23.69■■□□□ 1.38
MTA1-208ENST00000438610 SLC52A2Q9HAB3 445 aa23.69■■□□□ 1.38
MTA1-208ENST00000438610 USP35Q9P2H5 1018 aa23.69■■□□□ 1.38
MTA1-208ENST00000438610 PLCH1Q4KWH8 1693 aa23.69■■□□□ 1.38
MTA1-208ENST00000438610 AAMPQ13685 434 aa23.68■■□□□ 1.38
MTA1-208ENST00000438610 NKX1-1Q15270 411 aaPredicted RBP23.68■■□□□ 1.38
MTA1-208ENST00000438610 FTSJ3Q8IY81 847 aaKnown RBP23.68■■□□□ 1.38
MTA1-208ENST00000438610 KDM3BQ7LBC6 1761 aa23.68■■□□□ 1.38
MTA1-208ENST00000438610 SPATA31A6Q5VVP1 1343 aa23.68■■□□□ 1.38
MTA1-208ENST00000438610 TNNQ9UQP3 1299 aa23.68■■□□□ 1.38
MTA1-208ENST00000438610 COG6Q9Y2V7 657 aa23.68■■□□□ 1.38
MTA1-208ENST00000438610 SIPA1L3O60292 1781 aaPredicted RBP23.67■■□□□ 1.38
MTA1-208ENST00000438610 HOXB7P09629 217 aa23.67■■□□□ 1.38
MTA1-208ENST00000438610 CHMP4AQ9BY43 222 aa23.67■■□□□ 1.38
MTA1-208ENST00000438610 CLUAP1Q96AJ1 413 aa23.66■■□□□ 1.38
MTA1-208ENST00000438610 SLIT2O94813 1529 aa23.66■■□□□ 1.38
MTA1-208ENST00000438610 DISP2A7MBM2 1401 aa23.66■■□□□ 1.38
MTA1-208ENST00000438610 TCERG1O14776 1098 aaKnown RBP23.66■■□□□ 1.38
MTA1-208ENST00000438610 THRAP3Q9Y2W1 955 aaKnown RBP23.66■■□□□ 1.38
MTA1-208ENST00000438610 NWD2Q9ULI1 1742 aa23.65■■□□□ 1.38
MTA1-208ENST00000438610 MVPQ14764 893 aaKnown RBP23.65■■□□□ 1.38
MTA1-208ENST00000438610 CCDC30Q5VVM6 783 aa23.65■■□□□ 1.38
MTA1-208ENST00000438610 NFATC2IPQ8NCF5 419 aa23.65■■□□□ 1.38
MTA1-208ENST00000438610 NRAPQ86VF7 1730 aa23.64■■□□□ 1.38
MTA1-208ENST00000438610 KCNQ3O43525 872 aa23.64■■□□□ 1.37
MTA1-208ENST00000438610 CDCA7Q9BWT1 371 aaPredicted RBP23.64■■□□□ 1.37
MTA1-208ENST00000438610 MRC1P22897 1456 aa23.64■■□□□ 1.37
MTA1-208ENST00000438610 API5Q9BZZ5 524 aaKnown RBP23.63■■□□□ 1.37
MTA1-208ENST00000438610 SPATA31A1Q5TZJ5 1347 aa23.63■■□□□ 1.37
MTA1-208ENST00000438610 ERVV-2B6SEH9 535 aa23.63■■□□□ 1.37
MTA1-208ENST00000438610 SLC4A2P04920 1241 aa23.62■■□□□ 1.37
MTA1-208ENST00000438610 DDX54Q8TDD1 881 aaKnown RBP23.62■■□□□ 1.37
MTA1-208ENST00000438610 HEG1Q9ULI3 1381 aa23.62■■□□□ 1.37
MTA1-208ENST00000438610 HSPA1LP34931 641 aa23.62■■□□□ 1.37
MTA1-208ENST00000438610 STK31Q9BXU1 1019 aa23.62■■□□□ 1.37
MTA1-208ENST00000438610 CABP4P57796 275 aa23.61■■□□□ 1.37
MTA1-208ENST00000438610 PTPRCP08575 1304 aa23.61■■□□□ 1.37
MTA1-208ENST00000438610 ZNF790Q6PG37 636 aa23.6■■□□□ 1.37
MTA1-208ENST00000438610 SPATA31A5Q5VU36 1347 aa23.6■■□□□ 1.37
MTA1-208ENST00000438610 SPATA31A7Q8IWB4 1347 aa23.6■■□□□ 1.37
MTA1-208ENST00000438610 SHANK3Q9BYB0 1731 aa23.6■■□□□ 1.37
MTA1-208ENST00000438610 UNC5CLQ8IV45 518 aa23.6■■□□□ 1.37
MTA1-208ENST00000438610 NGLY1Q96IV0 654 aa23.6■■□□□ 1.37
MTA1-208ENST00000438610 DDX19BQ9UMR2 479 aa23.59■■□□□ 1.37
MTA1-208ENST00000438610 EXOC5O00471 708 aa23.59■■□□□ 1.37
MTA1-208ENST00000438610 FNBP4Q8N3X1 1017 aaPredicted RBP23.59■■□□□ 1.37
MTA1-208ENST00000438610 TMEM57Q8N5G2 664 aa23.59■■□□□ 1.37
MTA1-208ENST00000438610 HDGFL1Q5TGJ6 251 aa23.58■■□□□ 1.37
MTA1-208ENST00000438610 TSHZ2Q9NRE2 1034 aa23.58■■□□□ 1.37
MTA1-208ENST00000438610 ABCC4O15439 1325 aa23.58■■□□□ 1.37
MTA1-208ENST00000438610 GIGYF1O75420 1035 aaPredicted RBP23.57■■□□□ 1.36
MTA1-208ENST00000438610 C8orf37Q96NL8 207 aa23.57■■□□□ 1.36
MTA1-208ENST00000438610 CACNA1FO60840 1977 aa23.57■■□□□ 1.36
MTA1-208ENST00000438610 BARGINQ6ZT62 677 aa23.56■■□□□ 1.36
MTA1-208ENST00000438610 ITPRIPQ8IWB1 547 aa23.56■■□□□ 1.36
MTA1-208ENST00000438610 SLC39A6Q13433 755 aa23.55■■□□□ 1.36
MTA1-208ENST00000438610 VPS72Q15906 364 aa23.54■■□□□ 1.36
MTA1-208ENST00000438610 CHMP4BQ9H444 224 aaKnown RBP23.54■■□□□ 1.36
MTA1-208ENST00000438610 BCL9LQ86UU0 1499 aa23.54■■□□□ 1.36
MTA1-208ENST00000438610 TTC5Q8N0Z6 440 aa23.54■■□□□ 1.36
MTA1-208ENST00000438610 WNK3Q9BYP7 1800 aa23.54■■□□□ 1.36
MTA1-208ENST00000438610 LRP6O75581 1613 aa23.53■■□□□ 1.36
MTA1-208ENST00000438610 EIF2S2P20042 333 aaKnown RBP23.53■■□□□ 1.36
MTA1-208ENST00000438610 G2E3Q7L622 706 aa23.53■■□□□ 1.36
MTA1-208ENST00000438610 NECTIN2Q92692 538 aa23.53■■□□□ 1.36
MTA1-208ENST00000438610 CCDC9Q9Y3X0 531 aaKnown RBP23.53■■□□□ 1.36
MTA1-208ENST00000438610 TNS2Q63HR2 1409 aa23.52■■□□□ 1.36
MTA1-208ENST00000438610 INTS3Q68E01 1043 aaKnown RBP23.51■■□□□ 1.35
MTA1-208ENST00000438610 RGS12O14924 1447 aa23.51■■□□□ 1.35
MTA1-208ENST00000438610 FLIIQ13045 1269 aa23.51■■□□□ 1.35
MTA1-208ENST00000438610 FMNL2Q96PY5 1086 aa23.51■■□□□ 1.35
MTA1-208ENST00000438610 DDB1Q16531 1140 aa23.5■■□□□ 1.35
MTA1-208ENST00000438610 ZNF496Q96IT1 587 aaPredicted RBP23.5■■□□□ 1.35
MTA1-208ENST00000438610 ZBTB40Q9NUA8 1239 aa23.5■■□□□ 1.35
MTA1-208ENST00000438610 DBF4Q9UBU7 674 aaPredicted RBP23.5■■□□□ 1.35
MTA1-208ENST00000438610 KDM2BQ8NHM5 1336 aa23.49■■□□□ 1.35
MTA1-208ENST00000438610 SNRPA1P09661 255 aaKnown RBP23.49■■□□□ 1.35
MTA1-208ENST00000438610 CENPQQ7L2Z9 268 aaPredicted RBP23.49■■□□□ 1.35
MTA1-208ENST00000438610 ZBTB7BO15156 539 aaPredicted RBP23.48■■□□□ 1.35
MTA1-208ENST00000438610 USP21Q9UK80 565 aa23.48■■□□□ 1.35
MTA1-208ENST00000438610 TMOD3Q9NYL9 352 aa23.48■■□□□ 1.35
MTA1-208ENST00000438610 CHPF2Q9P2E5 772 aa23.48■■□□□ 1.35
MTA1-208ENST00000438610 PCDHB15Q9Y5E8 787 aa23.47■■□□□ 1.35
MTA1-208ENST00000438610 MEX3CQ5U5Q3 659 aaKnown RBP23.47■■□□□ 1.35
MTA1-208ENST00000438610 PRAMEF22A3QJZ6 481 aa23.46■■□□□ 1.35
MTA1-208ENST00000438610 FKBP5Q13451 457 aaPredicted RBP23.46■■□□□ 1.35
MTA1-208ENST00000438610 TOGARAM1Q9Y4F4 1720 aa23.45■■□□□ 1.34
MTA1-208ENST00000438610 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.45■■□□□ 1.34
MTA1-208ENST00000438610 CCT4P50991 539 aaKnown RBP23.44■■□□□ 1.34
MTA1-208ENST00000438610 HYPKQ9NX55 129 aa23.44■■□□□ 1.34
MTA1-208ENST00000438610 PIGBQ92521 554 aa23.44■■□□□ 1.34
MTA1-208ENST00000438610 PHAXQ9H814 394 aaKnown RBP23.44■■□□□ 1.34
MTA1-208ENST00000438610 DDX21Q9NR30 783 aaKnown RBP eCLIP23.44■■□□□ 1.34
MTA1-208ENST00000438610 PAPPAQ13219 1627 aa23.42■■□□□ 1.34
MTA1-208ENST00000438610 IGHDP01880 384 aa23.42■■□□□ 1.34
MTA1-208ENST00000438610 RWDD1Q9H446 243 aaPredicted RBP23.42■■□□□ 1.34
MTA1-208ENST00000438610 F6X3S4 739 aa23.41■■□□□ 1.34
MTA1-208ENST00000438610 FAM98CQ17RN3 349 aaKnown RBP23.41■■□□□ 1.34
MTA1-208ENST00000438610 USP16Q9Y5T5 823 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms