RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 RBM27Q9P2N5 1060 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-211ENST00000438547 SPG7Q9UQ90 795 aa13.13□□□□□ -0.31
SEMA4D-211ENST00000438547 NSD2O96028 1365 aa13.13□□□□□ -0.31
SEMA4D-211ENST00000438547 EIF3JO75822 258 aaKnown RBP13.13□□□□□ -0.31
SEMA4D-211ENST00000438547 NUP133Q8WUM0 1156 aa13.13□□□□□ -0.31
SEMA4D-211ENST00000438547 CDK5RAP3Q96JB5 506 aa13.13□□□□□ -0.31
SEMA4D-211ENST00000438547 CBX1P83916 185 aa13.13□□□□□ -0.31
SEMA4D-211ENST00000438547 STIM1Q13586 685 aa13.12□□□□□ -0.31
SEMA4D-211ENST00000438547 CKAP2LQ8IYA6 745 aa13.12□□□□□ -0.31
SEMA4D-211ENST00000438547 KIF18AQ8NI77 898 aa13.12□□□□□ -0.31
SEMA4D-211ENST00000438547 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
SEMA4D-211ENST00000438547 PANK2Q9BZ23 570 aa13.12□□□□□ -0.31
SEMA4D-211ENST00000438547 PRDM10Q9NQV6 1147 aa13.12□□□□□ -0.31
SEMA4D-211ENST00000438547 CTDP1Q9Y5B0 961 aaPredicted RBP13.12□□□□□ -0.31
SEMA4D-211ENST00000438547 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
SEMA4D-211ENST00000438547 MBIPQ9NS73 344 aa13.12□□□□□ -0.31
SEMA4D-211ENST00000438547 STX6O43752 255 aa13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 ADCY5O95622 1261 aa13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 SKIDA1Q1XH10 827 aa13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 ZSCAN23Q3MJ62 389 aa13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 ARHGAP45Q92619 1136 aa13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 NOL7Q9UMY1 257 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 RALGAPBQ86X10 1494 aa13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 FLIIQ13045 1269 aa13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 PROSER2Q86WR7 435 aaPredicted RBP13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 GNL3LQ9NVN8 582 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 CC2D2AQ9P2K1 1620 aa13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 IMMTQ16891 758 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 CLIP2Q9UDT6 1046 aa13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 TSPYL1Q9H0U9 437 aa13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 C14orf93Q9H972 538 aaKnown RBP13.11□□□□□ -0.31
SEMA4D-211ENST00000438547 TMCO3Q6UWJ1 677 aa13.1□□□□□ -0.31
SEMA4D-211ENST00000438547 CCAR1Q8IX12 1150 aaKnown RBP13.1□□□□□ -0.31
SEMA4D-211ENST00000438547 DDX19AQ9NUU7 478 aaKnown RBP13.1□□□□□ -0.31
SEMA4D-211ENST00000438547 TNNT1P13805 278 aa13.1□□□□□ -0.31
SEMA4D-211ENST00000438547 SNX21Q969T3 373 aa13.1□□□□□ -0.31
SEMA4D-211ENST00000438547 CCDC8Q9H0W5 538 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-211ENST00000438547 LARP1Q6PKG0 1096 aaKnown RBP13.1□□□□□ -0.31
SEMA4D-211ENST00000438547 DNAAF4Q8WXU2 420 aa13.1□□□□□ -0.31
SEMA4D-211ENST00000438547 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-211ENST00000438547 UVSSAQ2YD98 709 aa13.1□□□□□ -0.31
SEMA4D-211ENST00000438547 DEF6Q9H4E7 631 aa13.1□□□□□ -0.31
SEMA4D-211ENST00000438547 TFIP11Q9UBB9 837 aaKnown RBP13.1□□□□□ -0.31
SEMA4D-211ENST00000438547 MYO6Q9UM54 1294 aa13.1□□□□□ -0.31
SEMA4D-211ENST00000438547 CTAGE5O15320 804 aa13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 LRSAM1Q6UWE0 723 aa13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 TMX3Q96JJ7 454 aa13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 SDSP20132 328 aa13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 ERICH4A6NGS2 130 aa13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 GJB2P29033 226 aa13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 UBE2HP62256 183 aa13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 ARHGAP29Q52LW3 1261 aa13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 WASF1Q92558 559 aa13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 C16orf45Q96MC5 204 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 LUC7LQ9NQ29 371 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 KIF14Q15058 1648 aa13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 EPB41L2O43491 1005 aaKnown RBP13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 CCDC181Q5TID7 509 aa13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 MPHOSPH8Q99549 860 aa13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 UBAC1Q9BSL1 405 aa13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 ECHDC1Q9NTX5 307 aa13.09□□□□□ -0.31
SEMA4D-211ENST00000438547 FAM83GA6ND36 823 aa13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 IDI1Q13907 227 aa13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 TSHZ3Q63HK5 1081 aa13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 RDXP35241 583 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 TDO2P48775 406 aa13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 HSP90AB2PQ58FF8 381 aa13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 NOS1P29475 1434 aa13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 ZSCAN12O43309 604 aa13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 ODF2Q5BJF6 829 aa13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 PRM3Q9NNZ6 103 aa13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 WASLO00401 505 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 DYNC1I1O14576 645 aa13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 IDH1O75874 414 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 HMGB1P09429 215 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 HCLS1P14317 486 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 GUCY1B3Q02153 619 aa13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 C8orf76Q96K31 380 aa13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 STRN4Q9NRL3 753 aa13.08□□□□□ -0.32
SEMA4D-211ENST00000438547 KRT18P05783 430 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-211ENST00000438547 NEMFO60524 1076 aa13.07□□□□□ -0.32
SEMA4D-211ENST00000438547 URI1O94763 535 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-211ENST00000438547 TNNQ9UQP3 1299 aa13.07□□□□□ -0.32
SEMA4D-211ENST00000438547 FAM135AQ9P2D6 1515 aa13.07□□□□□ -0.32
SEMA4D-211ENST00000438547 ZNF165P49910 485 aa13.07□□□□□ -0.32
SEMA4D-211ENST00000438547 EVI5LQ96CN4 794 aa13.07□□□□□ -0.32
SEMA4D-211ENST00000438547 CCDC85AQ96PX6 553 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-211ENST00000438547 ASXL1Q8IXJ9 1541 aa13.07□□□□□ -0.32
SEMA4D-211ENST00000438547 RLBP1P12271 317 aa13.06□□□□□ -0.32
SEMA4D-211ENST00000438547 TOM1L2Q6ZVM7 507 aa13.06□□□□□ -0.32
SEMA4D-211ENST00000438547 CCDC102AQ96A19 550 aa13.06□□□□□ -0.32
SEMA4D-211ENST00000438547 TRMT1Q9NXH9 659 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-211ENST00000438547 SEC24BO95487 1268 aa13.06□□□□□ -0.32
SEMA4D-211ENST00000438547 IKQ13123 557 aaPredicted RBP13.06□□□□□ -0.32
SEMA4D-211ENST00000438547 GPATCH8Q9UKJ3 1502 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-211ENST00000438547 ZFYVE27Q5T4F4 411 aa13.06□□□□□ -0.32
SEMA4D-211ENST00000438547 PPP1R42Q7Z4L9 355 aa13.06□□□□□ -0.32
SEMA4D-211ENST00000438547 CCDC191Q8NCU4 936 aa13.06□□□□□ -0.32
SEMA4D-211ENST00000438547 PRIMPOLQ96LW4 560 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms