RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 PXDNLA1KZ92 1463 aa12.19□□□□□ -0.46
SCRN1-208ENST00000438497 TOGARAM1Q9Y4F4 1720 aa12.18□□□□□ -0.46
SCRN1-208ENST00000438497 ITPK1Q13572 414 aa12.18□□□□□ -0.46
SCRN1-208ENST00000438497 NKX1-1Q15270 411 aaPredicted RBP12.18□□□□□ -0.46
SCRN1-208ENST00000438497 HSP90AB2PQ58FF8 381 aa12.18□□□□□ -0.46
SCRN1-208ENST00000438497 SMC1BQ8NDV3 1235 aa12.18□□□□□ -0.46
SCRN1-208ENST00000438497 RNF181Q9P0P0 153 aa12.18□□□□□ -0.46
SCRN1-208ENST00000438497 ASAP1Q9ULH1 1129 aa12.18□□□□□ -0.46
SCRN1-208ENST00000438497 RTCBQ9Y3I0 505 aaKnown RBP12.18□□□□□ -0.46
SCRN1-208ENST00000438497 PARP3Q9Y6F1 533 aa12.18□□□□□ -0.46
SCRN1-208ENST00000438497 SMG6Q86US8 1419 aaKnown RBP12.18□□□□□ -0.46
SCRN1-208ENST00000438497 HSPA1AP0DMV8 641 aaKnown RBP12.17□□□□□ -0.46
SCRN1-208ENST00000438497 HSPA1BP0DMV9 641 aaKnown RBP12.17□□□□□ -0.46
SCRN1-208ENST00000438497 KCNA3P22001 575 aa12.17□□□□□ -0.46
SCRN1-208ENST00000438497 TMOD3Q9NYL9 352 aa12.17□□□□□ -0.46
SCRN1-208ENST00000438497 PLEKHG2Q9H7P9 1386 aa12.17□□□□□ -0.46
SCRN1-208ENST00000438497 FYB1O15117 783 aa12.16□□□□□ -0.46
SCRN1-208ENST00000438497 DALRD3Q5D0E6 543 aaKnown RBP12.16□□□□□ -0.46
SCRN1-208ENST00000438497 ARHGEF1Q92888 912 aaKnown RBP12.16□□□□□ -0.46
SCRN1-208ENST00000438497 GGNBP2Q9H3C7 697 aa12.16□□□□□ -0.46
SCRN1-208ENST00000438497 SPG7Q9UQ90 795 aa12.16□□□□□ -0.46
SCRN1-208ENST00000438497 RTL1A6NKG5 1358 aa12.16□□□□□ -0.46
SCRN1-208ENST00000438497 KCPQ6ZWJ8 1503 aa12.16□□□□□ -0.46
SCRN1-208ENST00000438497 KIF13BQ9NQT8 1826 aa12.16□□□□□ -0.46
SCRN1-208ENST00000438497 RFC4P35249 363 aa12.15□□□□□ -0.46
SCRN1-208ENST00000438497 MAP2P11137 1827 aaKnown RBP12.14□□□□□ -0.47
SCRN1-208ENST00000438497 DCAF5Q96JK2 942 aa12.14□□□□□ -0.47
SCRN1-208ENST00000438497 ATG3Q9NT62 314 aa12.14□□□□□ -0.47
SCRN1-208ENST00000438497 INSRP06213 1382 aa12.14□□□□□ -0.47
SCRN1-208ENST00000438497 KIAA1551Q9HCM1 1747 aa12.14□□□□□ -0.47
SCRN1-208ENST00000438497 GYS1P13807 737 aa12.13□□□□□ -0.47
SCRN1-208ENST00000438497 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
SCRN1-208ENST00000438497 RC3H1Q5TC82 1133 aaKnown RBP12.13□□□□□ -0.47
SCRN1-208ENST00000438497 RBM42Q9BTD8 480 aaKnown RBP12.13□□□□□ -0.47
SCRN1-208ENST00000438497 C10orf71Q711Q0 1435 aa12.12□□□□□ -0.47
SCRN1-208ENST00000438497 RPS6KA4O75676 772 aa12.12□□□□□ -0.47
SCRN1-208ENST00000438497 IFNL2Q8IZJ0 200 aa12.12□□□□□ -0.47
SCRN1-208ENST00000438497 ARFGEF1Q9Y6D6 1849 aa12.11□□□□□ -0.47
SCRN1-208ENST00000438497 SLC24A1O60721 1099 aa12.11□□□□□ -0.47
SCRN1-208ENST00000438497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.11□□□□□ -0.471e-10■□□□□ 10.4
SCRN1-208ENST00000438497 SBF1O95248 1867 aa12.1□□□□□ -0.47
SCRN1-208ENST00000438497 PCNTO95613 3336 aa12.1□□□□□ -0.47
SCRN1-208ENST00000438497 FLT4P35916 1363 aa12.1□□□□□ -0.47
SCRN1-208ENST00000438497 GLTPD2A6NH11 291 aa12.1□□□□□ -0.47
SCRN1-208ENST00000438497 SLC4A9Q96Q91 983 aa12.1□□□□□ -0.47
SCRN1-208ENST00000438497 BRCA1P38398 1863 aaKnown RBP12.1□□□□□ -0.47
SCRN1-208ENST00000438497 C4AP0C0L4 1744 aa12.09□□□□□ -0.47
SCRN1-208ENST00000438497 PPM1GO15355 546 aaPredicted RBP12.09□□□□□ -0.47
SCRN1-208ENST00000438497 PHKG2P15735 406 aa12.09□□□□□ -0.47
SCRN1-208ENST00000438497 CHRNA5P30532 468 aa12.09□□□□□ -0.47
SCRN1-208ENST00000438497 PKD1L3Q7Z443 1732 aa12.08□□□□□ -0.47
SCRN1-208ENST00000438497 TNRC6CQ9HCJ0 1690 aaKnown RBP12.08□□□□□ -0.48
SCRN1-208ENST00000438497 ST20-MTHFSA0A0A6YYL1 179 aa12.08□□□□□ -0.48
SCRN1-208ENST00000438497 SLC34A2O95436 690 aa12.08□□□□□ -0.48
SCRN1-208ENST00000438497 TESK2Q96S53 571 aa12.08□□□□□ -0.48
SCRN1-208ENST00000438497 EMILIN1Q9Y6C2 1016 aa12.08□□□□□ -0.48
SCRN1-208ENST00000438497 KIF24Q5T7B8 1368 aa12.07□□□□□ -0.48
SCRN1-208ENST00000438497 LMNB1P20700 586 aa12.07□□□□□ -0.48
SCRN1-208ENST00000438497 FKBP8Q14318 412 aa12.07□□□□□ -0.48
SCRN1-208ENST00000438497 EYA1Q99502 592 aa12.07□□□□□ -0.48
SCRN1-208ENST00000438497 ERVV-2B6SEH9 535 aa12.06□□□□□ -0.48
SCRN1-208ENST00000438497 DPY19L2Q6NUT2 758 aa12.06□□□□□ -0.48
SCRN1-208ENST00000438497 SRP68Q9UHB9 627 aaKnown RBP12.06□□□□□ -0.48
SCRN1-208ENST00000438497 CNTNAP4Q9C0A0 1308 aa12.06□□□□□ -0.48
SCRN1-208ENST00000438497 ZC3H4Q9UPT8 1303 aaKnown RBP12.06□□□□□ -0.48
SCRN1-208ENST00000438497 TM4SF1P30408 202 aa12.05□□□□□ -0.48
SCRN1-208ENST00000438497 RASSF7Q02833 373 aa12.05□□□□□ -0.48
SCRN1-208ENST00000438497 DDR1Q08345 913 aa12.05□□□□□ -0.48
SCRN1-208ENST00000438497 MKRN1Q9UHC7 482 aaKnown RBP12.05□□□□□ -0.48
SCRN1-208ENST00000438497 TONSLQ96HA7 1378 aa12.05□□□□□ -0.48
SCRN1-208ENST00000438497 POTECB2RU33 542 aa12.04□□□□□ -0.48
SCRN1-208ENST00000438497 WASHC2AQ641Q2 1341 aa12.04□□□□□ -0.48
SCRN1-208ENST00000438497 CCDC88AQ3V6T2 1871 aa12.04□□□□□ -0.48
SCRN1-208ENST00000438497 FOXN1O15353 648 aa12.03□□□□□ -0.48
SCRN1-208ENST00000438497 PTCD1O75127 700 aaKnown RBP12.03□□□□□ -0.48
SCRN1-208ENST00000438497 CRKLP46109 303 aaKnown RBP12.03□□□□□ -0.48
SCRN1-208ENST00000438497 CABP4P57796 275 aa12.03□□□□□ -0.48
SCRN1-208ENST00000438497 PRDM10Q9NQV6 1147 aa12.03□□□□□ -0.48
SCRN1-208ENST00000438497 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
SCRN1-208ENST00000438497 MYH14Q7Z406 1995 aaKnown RBP12.03□□□□□ -0.48
SCRN1-208ENST00000438497 KDRP35968 1356 aa12.03□□□□□ -0.48
SCRN1-208ENST00000438497 POLRMTO00411 1230 aaKnown RBP12.02□□□□□ -0.49
SCRN1-208ENST00000438497 ZPR1O75312 459 aa12.02□□□□□ -0.49
SCRN1-208ENST00000438497 HSP90AB1P08238 724 aaKnown RBP12.02□□□□□ -0.49
SCRN1-208ENST00000438497 TTLL6Q8N841 843 aa12.02□□□□□ -0.49
SCRN1-208ENST00000438497 USP42Q9H9J4 1324 aaKnown RBP12.02□□□□□ -0.49
SCRN1-208ENST00000438497 CHADLQ6NUI6 762 aa12.01□□□□□ -0.49
SCRN1-208ENST00000438497 NCAPD2Q15021 1401 aa12.01□□□□□ -0.49
SCRN1-208ENST00000438497 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
SCRN1-208ENST00000438497 CTCFP49711 727 aaPredicted RBP12□□□□□ -0.49
SCRN1-208ENST00000438497 PLEKHO1Q53GL0 409 aaPredicted RBP12□□□□□ -0.49
SCRN1-208ENST00000438497 USPL1Q5W0Q7 1092 aa12□□□□□ -0.49
SCRN1-208ENST00000438497 AIDAQ96BJ3 306 aa12□□□□□ -0.49
SCRN1-208ENST00000438497 KDM6AO15550 1401 aaPredicted RBP12□□□□□ -0.49
SCRN1-208ENST00000438497 H0YIN7 160 aa11.99□□□□□ -0.49
SCRN1-208ENST00000438497 NFATC2IPQ8NCF5 419 aa11.99□□□□□ -0.49
SCRN1-208ENST00000438497 CARD14Q9BXL6 1004 aa11.99□□□□□ -0.49
SCRN1-208ENST00000438497 COL5A3P25940 1745 aaPredicted RBP11.98□□□□□ -0.49
SCRN1-208ENST00000438497 SERPINB2P05120 415 aa11.98□□□□□ -0.49
SCRN1-208ENST00000438497 MTHFSP49914 203 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms