RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 C14orf93Q9H972 538 aaKnown RBP12.52□□□□□ -0.41
NIF3L1-208ENST00000436412 BTG4Q9NY30 223 aa12.52□□□□□ -0.41
NIF3L1-208ENST00000436412 RGPD8O14715 1765 aaPredicted RBP12.51□□□□□ -0.41
NIF3L1-208ENST00000436412 DHX57Q6P158 1386 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-208ENST00000436412 ANKARQ7Z5J8 1434 aa12.51□□□□□ -0.41
NIF3L1-208ENST00000436412 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
NIF3L1-208ENST00000436412 ABCA3Q99758 1704 aa12.51□□□□□ -0.41
NIF3L1-208ENST00000436412 IFT172Q9UG01 1749 aa12.51□□□□□ -0.41
NIF3L1-208ENST00000436412 R3HDM1Q15032 1099 aaKnown RBP12.5□□□□□ -0.41
NIF3L1-208ENST00000436412 SPATA31A5Q5VU36 1347 aa12.5□□□□□ -0.41
NIF3L1-208ENST00000436412 SPATA31A7Q8IWB4 1347 aa12.5□□□□□ -0.41
NIF3L1-208ENST00000436412 PPP4CP60510 307 aa12.49□□□□□ -0.41
NIF3L1-208ENST00000436412 NRAPQ86VF7 1730 aa12.48□□□□□ -0.41
NIF3L1-208ENST00000436412 GPRASP1Q5JY77 1395 aa12.48□□□□□ -0.41
NIF3L1-208ENST00000436412 PMFBP1Q8TBY8 1022 aa12.48□□□□□ -0.41
NIF3L1-208ENST00000436412 PRAM1Q96QH2 718 aa12.48□□□□□ -0.41
NIF3L1-208ENST00000436412 COL14A1Q05707 1796 aaKnown RBP12.48□□□□□ -0.41
NIF3L1-208ENST00000436412 EIF3AQ14152 1382 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-208ENST00000436412 PARD3Q8TEW0 1356 aa12.47□□□□□ -0.41
NIF3L1-208ENST00000436412 SWT1Q5T5J6 900 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-208ENST00000436412 FAM196AQ6ZSG2 479 aa12.47□□□□□ -0.41
NIF3L1-208ENST00000436412 MPHOSPH9Q99550 1183 aa12.47□□□□□ -0.41
NIF3L1-208ENST00000436412 POGKQ9P215 609 aa12.47□□□□□ -0.41
NIF3L1-208ENST00000436412 ACIN1Q9UKV3 1341 aaKnown RBP12.46□□□□□ -0.41
NIF3L1-208ENST00000436412 CAMKK2Q96RR4 588 aa12.46□□□□□ -0.41
NIF3L1-208ENST00000436412 DLC1Q96QB1 1528 aa12.46□□□□□ -0.42
NIF3L1-208ENST00000436412 SAFB2Q14151 953 aaKnown RBP eCLIP12.45□□□□□ -0.42
NIF3L1-208ENST00000436412 EZH2Q15910 746 aaKnown RBP12.45□□□□□ -0.42
NIF3L1-208ENST00000436412 CFAP70Q5T0N1 1121 aa12.45□□□□□ -0.42
NIF3L1-208ENST00000436412 ADGRG1Q9Y653 693 aa12.45□□□□□ -0.42
NIF3L1-208ENST00000436412 THSD7AQ9UPZ6 1657 aa12.45□□□□□ -0.42
NIF3L1-208ENST00000436412 ADGRB2O60241 1585 aa12.44□□□□□ -0.42
NIF3L1-208ENST00000436412 KCNC4Q03721 635 aa12.44□□□□□ -0.42
NIF3L1-208ENST00000436412 FAM182BQ5T319 152 aa12.44□□□□□ -0.42
NIF3L1-208ENST00000436412 RBM26Q5T8P6 1007 aaKnown RBP12.44□□□□□ -0.42
NIF3L1-208ENST00000436412 PRDM11Q9NQV5 511 aa12.44□□□□□ -0.42
NIF3L1-208ENST00000436412 TRPM3Q9HCF6 1732 aaPredicted RBP12.44□□□□□ -0.42
NIF3L1-208ENST00000436412 ALS2Q96Q42 1657 aa12.44□□□□□ -0.42
NIF3L1-208ENST00000436412 SPATA31A1Q5TZJ5 1347 aa12.43□□□□□ -0.42
NIF3L1-208ENST00000436412 TJAP1Q5JTD0 557 aa12.43□□□□□ -0.42
NIF3L1-208ENST00000436412 TNS1Q9HBL0 1735 aaKnown RBP12.42□□□□□ -0.42
NIF3L1-208ENST00000436412 RGS20O76081 388 aa12.42□□□□□ -0.42
NIF3L1-208ENST00000436412 FCHSD2O94868 740 aa12.42□□□□□ -0.42
NIF3L1-208ENST00000436412 TRIM37O94972 964 aa12.42□□□□□ -0.42
NIF3L1-208ENST00000436412 YY1P25490 414 aa12.42□□□□□ -0.42
NIF3L1-208ENST00000436412 APLP1P51693 650 aa12.42□□□□□ -0.42
NIF3L1-208ENST00000436412 FAM161AQ3B820 660 aa12.42□□□□□ -0.42
NIF3L1-208ENST00000436412 NBPF8Q3BBV2 869 aa12.42□□□□□ -0.42
NIF3L1-208ENST00000436412 NBPF14Q5TI25 921 aa12.42□□□□□ -0.42
NIF3L1-208ENST00000436412 NGDNQ8NEJ9 315 aaKnown RBP12.42□□□□□ -0.42
NIF3L1-208ENST00000436412 APBA3O96018 575 aa12.41□□□□□ -0.42
NIF3L1-208ENST00000436412 WASLO00401 505 aaPredicted RBP12.4□□□□□ -0.42
NIF3L1-208ENST00000436412 GPR37O15354 613 aa12.4□□□□□ -0.42
NIF3L1-208ENST00000436412 BARGINQ6ZT62 677 aa12.4□□□□□ -0.42
NIF3L1-208ENST00000436412 PRR36Q9H6K5 1346 aa12.39□□□□□ -0.43
NIF3L1-208ENST00000436412 TULP4Q9NRJ4 1543 aa12.39□□□□□ -0.43
NIF3L1-208ENST00000436412 C11orf95C9JLR9 678 aaPredicted RBP12.39□□□□□ -0.43
NIF3L1-208ENST00000436412 RNF40O75150 1001 aa12.39□□□□□ -0.43
NIF3L1-208ENST00000436412 PDE3BQ13370 1112 aa12.39□□□□□ -0.43
NIF3L1-208ENST00000436412 HIRIP3Q9BW71 556 aaPredicted RBP12.39□□□□□ -0.43
NIF3L1-208ENST00000436412 UTRNP46939 3433 aa12.39□□□□□ -0.43
NIF3L1-208ENST00000436412 KIAA0232Q92628 1395 aa12.39□□□□□ -0.43
NIF3L1-208ENST00000436412 CRYBG1Q9Y4K1 1723 aa12.38□□□□□ -0.43
NIF3L1-208ENST00000436412 SPON1Q9HCB6 807 aa12.38□□□□□ -0.43
NIF3L1-208ENST00000436412 TRAK1Q9UPV9 953 aa12.38□□□□□ -0.43
NIF3L1-208ENST00000436412 MINK1Q8N4C8 1332 aaPredicted RBP12.37□□□□□ -0.43
NIF3L1-208ENST00000436412 SLF2Q8IX21 1173 aa12.37□□□□□ -0.43
NIF3L1-208ENST00000436412 RBM46Q8TBY0 533 aaKnown RBP12.37□□□□□ -0.43
NIF3L1-208ENST00000436412 MTRQ99707 1265 aa12.37□□□□□ -0.43
NIF3L1-208ENST00000436412 STRN4Q9NRL3 753 aa12.37□□□□□ -0.43
NIF3L1-208ENST00000436412 ADGRB1O14514 1584 aa12.37□□□□□ -0.43
NIF3L1-208ENST00000436412 ATP7BP35670 1465 aa12.36□□□□□ -0.43
NIF3L1-208ENST00000436412 NINLQ9Y2I6 1382 aa12.36□□□□□ -0.43
NIF3L1-208ENST00000436412 DNAJB2P25686 324 aa12.36□□□□□ -0.43
NIF3L1-208ENST00000436412 EVA1CP58658 441 aa12.36□□□□□ -0.43
NIF3L1-208ENST00000436412 TMEM134Q9H6X4 195 aa12.36□□□□□ -0.43
NIF3L1-208ENST00000436412 PPP1R1BQ9UD71 204 aaPredicted RBP12.36□□□□□ -0.43
NIF3L1-208ENST00000436412 RREB1Q92766 1687 aa12.35□□□□□ -0.43
NIF3L1-208ENST00000436412 RCCD1A6NED2 376 aa12.35□□□□□ -0.43
NIF3L1-208ENST00000436412 KCNQ2O43526 872 aa12.35□□□□□ -0.43
NIF3L1-208ENST00000436412 FECHP22830 423 aa12.35□□□□□ -0.43
NIF3L1-208ENST00000436412 CHRNA2Q15822 529 aa12.35□□□□□ -0.43
NIF3L1-208ENST00000436412 SMYD5Q6GMV2 418 aa12.35□□□□□ -0.43
NIF3L1-208ENST00000436412 VSIG10Q8N0Z9 540 aa12.35□□□□□ -0.43
NIF3L1-208ENST00000436412 TCP11L2Q8N4U5 519 aa12.35□□□□□ -0.43
NIF3L1-208ENST00000436412 THRAP3Q9Y2W1 955 aaKnown RBP12.35□□□□□ -0.43
NIF3L1-208ENST00000436412 ZC3H6P61129 1189 aaKnown RBP12.34□□□□□ -0.43
NIF3L1-208ENST00000436412 HIC1Q14526 733 aa12.34□□□□□ -0.43
NIF3L1-208ENST00000436412 NUDT16Q96DE0 195 aaKnown RBP12.34□□□□□ -0.43
NIF3L1-208ENST00000436412 USP35Q9P2H5 1018 aa12.34□□□□□ -0.43
NIF3L1-208ENST00000436412 SSH2Q76I76 1423 aa12.34□□□□□ -0.43
NIF3L1-208ENST00000436412 ZNF516Q92618 1163 aa12.33□□□□□ -0.44
NIF3L1-208ENST00000436412 IL21Q9HBE4 155 aa12.33□□□□□ -0.44
NIF3L1-208ENST00000436412 ITSN1Q15811 1721 aa12.33□□□□□ -0.44
NIF3L1-208ENST00000436412 NUP188Q5SRE5 1749 aa12.33□□□□□ -0.44
NIF3L1-208ENST00000436412 CPDO75976 1380 aa12.32□□□□□ -0.44
NIF3L1-208ENST00000436412 PXYLP1Q8TE99 480 aa12.32□□□□□ -0.44
NIF3L1-208ENST00000436412 POLR3AO14802 1390 aaPredicted RBP12.31□□□□□ -0.44
NIF3L1-208ENST00000436412 LARP1Q6PKG0 1096 aaKnown RBP12.31□□□□□ -0.44
NIF3L1-208ENST00000436412 NECTIN2Q92692 538 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms