RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 RLBP1P12271 317 aa13.52□□□□□ -0.25
NEFM-202ENST00000433454 NUTM2BA6NNL0 878 aaPredicted RBP13.51□□□□□ -0.25
NEFM-202ENST00000433454 NUTM2EB1AL46 878 aaPredicted RBP13.51□□□□□ -0.25
NEFM-202ENST00000433454 NUTM2AQ8IVF1 878 aaPredicted RBP13.51□□□□□ -0.25
NEFM-202ENST00000433454 ZCRB1Q8TBF4 217 aaKnown RBP13.51□□□□□ -0.25
NEFM-202ENST00000433454 DCAF5Q96JK2 942 aa13.51□□□□□ -0.25
NEFM-202ENST00000433454 TNNQ9UQP3 1299 aa13.51□□□□□ -0.25
NEFM-202ENST00000433454 NRAPQ86VF7 1730 aa13.51□□□□□ -0.25
NEFM-202ENST00000433454 ARHGAP45Q92619 1136 aa13.51□□□□□ -0.25
NEFM-202ENST00000433454 MRC1P22897 1456 aa13.5□□□□□ -0.25
NEFM-202ENST00000433454 TCERG1O14776 1098 aaKnown RBP13.5□□□□□ -0.25
NEFM-202ENST00000433454 USP35Q9P2H5 1018 aa13.5□□□□□ -0.25
NEFM-202ENST00000433454 NWD2Q9ULI1 1742 aa13.5□□□□□ -0.25
NEFM-202ENST00000433454 MVPQ14764 893 aaKnown RBP13.5□□□□□ -0.25
NEFM-202ENST00000433454 SHANK3Q9BYB0 1731 aa13.5□□□□□ -0.25
NEFM-202ENST00000433454 AAMPQ13685 434 aa13.49□□□□□ -0.25
NEFM-202ENST00000433454 SLC52A2Q9HAB3 445 aa13.49□□□□□ -0.25
NEFM-202ENST00000433454 WNK3Q9BYP7 1800 aa13.48□□□□□ -0.25
NEFM-202ENST00000433454 HOXB7P09629 217 aa13.48□□□□□ -0.25
NEFM-202ENST00000433454 EIF4A1P60842 406 aaKnown RBP13.48□□□□□ -0.25
NEFM-202ENST00000433454 DISP2A7MBM2 1401 aa13.48□□□□□ -0.25
NEFM-202ENST00000433454 STK31Q9BXU1 1019 aa13.48□□□□□ -0.25
NEFM-202ENST00000433454 CCDC30Q5VVM6 783 aa13.47□□□□□ -0.25
NEFM-202ENST00000433454 ITPRIPQ8IWB1 547 aa13.47□□□□□ -0.25
NEFM-202ENST00000433454 API5Q9BZZ5 524 aaKnown RBP13.47□□□□□ -0.25
NEFM-202ENST00000433454 SLIT2O94813 1529 aa13.47□□□□□ -0.25
NEFM-202ENST00000433454 CHMP4AQ9BY43 222 aa13.47□□□□□ -0.25
NEFM-202ENST00000433454 DDX19BQ9UMR2 479 aa13.47□□□□□ -0.25
NEFM-202ENST00000433454 CACNA1FO60840 1977 aa13.47□□□□□ -0.25
NEFM-202ENST00000433454 PTPRCP08575 1304 aa13.46□□□□□ -0.25
NEFM-202ENST00000433454 SLC4A2P04920 1241 aa13.46□□□□□ -0.25
NEFM-202ENST00000433454 SPATA31A6Q5VVP1 1343 aa13.46□□□□□ -0.25
NEFM-202ENST00000433454 KCNQ3O43525 872 aa13.46□□□□□ -0.26
NEFM-202ENST00000433454 TMEM57Q8N5G2 664 aa13.46□□□□□ -0.26
NEFM-202ENST00000433454 NFATC2IPQ8NCF5 419 aa13.46□□□□□ -0.26
NEFM-202ENST00000433454 ABCC4O15439 1325 aa13.45□□□□□ -0.26
NEFM-202ENST00000433454 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
NEFM-202ENST00000433454 HDGFL1Q5TGJ6 251 aa13.45□□□□□ -0.26
NEFM-202ENST00000433454 CABP4P57796 275 aa13.45□□□□□ -0.26
NEFM-202ENST00000433454 DDX54Q8TDD1 881 aaKnown RBP13.45□□□□□ -0.26
NEFM-202ENST00000433454 ZNF790Q6PG37 636 aa13.44□□□□□ -0.26
NEFM-202ENST00000433454 HEG1Q9ULI3 1381 aa13.44□□□□□ -0.26
NEFM-202ENST00000433454 CDCA7Q9BWT1 371 aaPredicted RBP13.44□□□□□ -0.26
NEFM-202ENST00000433454 THRAP3Q9Y2W1 955 aaKnown RBP13.44□□□□□ -0.26
NEFM-202ENST00000433454 SPATA31A1Q5TZJ5 1347 aa13.44□□□□□ -0.26
NEFM-202ENST00000433454 RGS12O14924 1447 aa13.43□□□□□ -0.26
NEFM-202ENST00000433454 ERVV-2B6SEH9 535 aa13.43□□□□□ -0.26
NEFM-202ENST00000433454 TNS2Q63HR2 1409 aa13.43□□□□□ -0.26
NEFM-202ENST00000433454 TTC5Q8N0Z6 440 aa13.43□□□□□ -0.26
NEFM-202ENST00000433454 NECTIN2Q92692 538 aa13.43□□□□□ -0.26
NEFM-202ENST00000433454 GIGYF1O75420 1035 aaPredicted RBP13.42□□□□□ -0.26
NEFM-202ENST00000433454 CENPQQ7L2Z9 268 aaPredicted RBP13.42□□□□□ -0.26
NEFM-202ENST00000433454 C8orf37Q96NL8 207 aa13.42□□□□□ -0.26
NEFM-202ENST00000433454 CHMP4BQ9H444 224 aaKnown RBP13.42□□□□□ -0.26
NEFM-202ENST00000433454 SPATA31A5Q5VU36 1347 aa13.42□□□□□ -0.26
NEFM-202ENST00000433454 SPATA31A7Q8IWB4 1347 aa13.42□□□□□ -0.26
NEFM-202ENST00000433454 SLC39A6Q13433 755 aa13.42□□□□□ -0.26
NEFM-202ENST00000433454 KDM2BQ8NHM5 1336 aa13.42□□□□□ -0.26
NEFM-202ENST00000433454 LRP6O75581 1613 aa13.42□□□□□ -0.26
NEFM-202ENST00000433454 TOGARAM1Q9Y4F4 1720 aa13.41□□□□□ -0.26
NEFM-202ENST00000433454 EIF2S2P20042 333 aaKnown RBP13.41□□□□□ -0.26
NEFM-202ENST00000433454 HSPA1LP34931 641 aa13.41□□□□□ -0.26
NEFM-202ENST00000433454 UNC5CLQ8IV45 518 aa13.41□□□□□ -0.26
NEFM-202ENST00000433454 NGLY1Q96IV0 654 aa13.41□□□□□ -0.26
NEFM-202ENST00000433454 FLIIQ13045 1269 aa13.41□□□□□ -0.26
NEFM-202ENST00000433454 CCDC9Q9Y3X0 531 aaKnown RBP13.41□□□□□ -0.26
NEFM-202ENST00000433454 EXOC5O00471 708 aa13.4□□□□□ -0.26
NEFM-202ENST00000433454 G2E3Q7L622 706 aa13.4□□□□□ -0.26
NEFM-202ENST00000433454 PAPPAQ13219 1627 aa13.4□□□□□ -0.26
NEFM-202ENST00000433454 ZBTB40Q9NUA8 1239 aa13.4□□□□□ -0.26
NEFM-202ENST00000433454 C5P01031 1676 aa13.4□□□□□ -0.27
NEFM-202ENST00000433454 FKBP5Q13451 457 aaPredicted RBP13.39□□□□□ -0.27
NEFM-202ENST00000433454 INTS3Q68E01 1043 aaKnown RBP13.39□□□□□ -0.27
NEFM-202ENST00000433454 BCL9LQ86UU0 1499 aa13.39□□□□□ -0.27
NEFM-202ENST00000433454 FMNL2Q96PY5 1086 aa13.39□□□□□ -0.27
NEFM-202ENST00000433454 CHPF2Q9P2E5 772 aa13.39□□□□□ -0.27
NEFM-202ENST00000433454 UBR2Q8IWV8 1755 aa13.39□□□□□ -0.27
NEFM-202ENST00000433454 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.39□□□□□ -0.27
NEFM-202ENST00000433454 BARGINQ6ZT62 677 aa13.39□□□□□ -0.27
NEFM-202ENST00000433454 ZNF496Q96IT1 587 aaPredicted RBP13.39□□□□□ -0.27
NEFM-202ENST00000433454 DBF4Q9UBU7 674 aaPredicted RBP13.39□□□□□ -0.27
NEFM-202ENST00000433454 FNBP4Q8N3X1 1017 aaPredicted RBP13.38□□□□□ -0.27
NEFM-202ENST00000433454 PCDHB15Q9Y5E8 787 aa13.38□□□□□ -0.27
NEFM-202ENST00000433454 VPS72Q15906 364 aa13.38□□□□□ -0.27
NEFM-202ENST00000433454 DDB1Q16531 1140 aa13.38□□□□□ -0.27
NEFM-202ENST00000433454 TMOD3Q9NYL9 352 aa13.38□□□□□ -0.27
NEFM-202ENST00000433454 GLI3P10071 1580 aa13.37□□□□□ -0.27
NEFM-202ENST00000433454 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
NEFM-202ENST00000433454 PRAMEF22A3QJZ6 481 aa13.37□□□□□ -0.27
NEFM-202ENST00000433454 ZBTB7BO15156 539 aaPredicted RBP13.37□□□□□ -0.27
NEFM-202ENST00000433454 SNRPA1P09661 255 aaKnown RBP13.37□□□□□ -0.27
NEFM-202ENST00000433454 N4BP2Q86UW6 1770 aaPredicted RBP13.37□□□□□ -0.27
NEFM-202ENST00000433454 PXDNLA1KZ92 1463 aa13.37□□□□□ -0.27
NEFM-202ENST00000433454 ITGB4P16144 1822 aa13.36□□□□□ -0.27
NEFM-202ENST00000433454 CCT4P50991 539 aaKnown RBP13.36□□□□□ -0.27
NEFM-202ENST00000433454 MEX3CQ5U5Q3 659 aaKnown RBP13.36□□□□□ -0.27
NEFM-202ENST00000433454 KCPQ6ZWJ8 1503 aa13.36□□□□□ -0.27
NEFM-202ENST00000433454 F6X3S4 739 aa13.36□□□□□ -0.27
NEFM-202ENST00000433454 IGHDP01880 384 aa13.36□□□□□ -0.27
NEFM-202ENST00000433454 SLC4A10Q6U841 1118 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms