RNA–Protein interactions for RNA: ENST00000430789.1

AFF3-209, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 3

Gene AFF3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-209ENST00000430789 KIF13BQ9NQT8 1826 aa8.32□□□□□ -1.08
AFF3-209ENST00000430789 GNPATO15228 680 aa8.32□□□□□ -1.08
AFF3-209ENST00000430789 CAPN15O75808 1086 aa8.32□□□□□ -1.08
AFF3-209ENST00000430789 TNS4Q8IZW8 715 aa8.32□□□□□ -1.08
AFF3-209ENST00000430789 NLGN1Q8N2Q7 840 aa8.32□□□□□ -1.08
AFF3-209ENST00000430789 SLC4A9Q96Q91 983 aa8.32□□□□□ -1.08
AFF3-209ENST00000430789 WDR90Q96KV7 1748 aa8.32□□□□□ -1.08
AFF3-209ENST00000430789 FCHSD2O94868 740 aa8.31□□□□□ -1.08
AFF3-209ENST00000430789 GYS1P13807 737 aa8.31□□□□□ -1.08
AFF3-209ENST00000430789 TMF1P82094 1093 aa8.31□□□□□ -1.08
AFF3-209ENST00000430789 NEUROD1Q13562 356 aa8.31□□□□□ -1.08
AFF3-209ENST00000430789 ARHGEF1Q92888 912 aaKnown RBP8.31□□□□□ -1.08
AFF3-209ENST00000430789 ATG3Q9NT62 314 aa8.31□□□□□ -1.08
AFF3-209ENST00000430789 PCNTO95613 3336 aa8.31□□□□□ -1.08
AFF3-209ENST00000430789 KIF24Q5T7B8 1368 aa8.31□□□□□ -1.08
AFF3-209ENST00000430789 ATP6V1AP38606 617 aa8.3□□□□□ -1.08
AFF3-209ENST00000430789 TRAPPC3LQ5T215 181 aa8.3□□□□□ -1.08
AFF3-209ENST00000430789 RC3H1Q5TC82 1133 aaKnown RBP8.3□□□□□ -1.08
AFF3-209ENST00000430789 DCAF5Q96JK2 942 aa8.3□□□□□ -1.08
AFF3-209ENST00000430789 GGNBP2Q9H3C7 697 aa8.3□□□□□ -1.08
AFF3-209ENST00000430789 RRAGCQ9HB90 399 aa8.3□□□□□ -1.08
AFF3-209ENST00000430789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.3□□□□□ -1.08
AFF3-209ENST00000430789 PLEKHG2Q9H7P9 1386 aa8.3□□□□□ -1.08
AFF3-209ENST00000430789 ITGB4P16144 1822 aa8.29□□□□□ -1.08
AFF3-209ENST00000430789 C16orf71Q8IYS4 520 aaPredicted RBP8.29□□□□□ -1.08
AFF3-209ENST00000430789 CCDC87Q9NVE4 849 aa8.29□□□□□ -1.08
AFF3-209ENST00000430789 FLT4P35916 1363 aa8.29□□□□□ -1.08
AFF3-209ENST00000430789 KDRP35968 1356 aa8.29□□□□□ -1.08
AFF3-209ENST00000430789 TONSLQ96HA7 1378 aa8.29□□□□□ -1.08
AFF3-209ENST00000430789 KCPQ6ZWJ8 1503 aa8.29□□□□□ -1.08
AFF3-209ENST00000430789 SMG6Q86US8 1419 aaKnown RBP8.29□□□□□ -1.08
AFF3-209ENST00000430789 KDM2BQ8NHM5 1336 aa8.29□□□□□ -1.08
AFF3-209ENST00000430789 N4BP2Q86UW6 1770 aaPredicted RBP8.28□□□□□ -1.08
AFF3-209ENST00000430789 ST20-MTHFSA0A0A6YYL1 179 aa8.28□□□□□ -1.08
AFF3-209ENST00000430789 RPS6KA4O75676 772 aa8.28□□□□□ -1.08
AFF3-209ENST00000430789 PHKG2P15735 406 aa8.28□□□□□ -1.08
AFF3-209ENST00000430789 CACNB1Q02641 598 aaPredicted RBP8.28□□□□□ -1.08
AFF3-209ENST00000430789 SMC1BQ8NDV3 1235 aa8.28□□□□□ -1.08
AFF3-209ENST00000430789 TMOD3Q9NYL9 352 aa8.28□□□□□ -1.08
AFF3-209ENST00000430789 PIM2Q9P1W9 311 aa8.28□□□□□ -1.08
AFF3-209ENST00000430789 SPG7Q9UQ90 795 aa8.28□□□□□ -1.08
AFF3-209ENST00000430789 RTCBQ9Y3I0 505 aaKnown RBP8.28□□□□□ -1.08
AFF3-209ENST00000430789 PKD1L3Q7Z443 1732 aa8.27□□□□□ -1.09
AFF3-209ENST00000430789 HSPA1AP0DMV8 641 aaKnown RBP8.27□□□□□ -1.09
AFF3-209ENST00000430789 HSPA1BP0DMV9 641 aaKnown RBP8.27□□□□□ -1.09
AFF3-209ENST00000430789 DALRD3Q5D0E6 543 aaKnown RBP8.27□□□□□ -1.09
AFF3-209ENST00000430789 EYA1Q99502 592 aa8.27□□□□□ -1.09
AFF3-209ENST00000430789 RNF181Q9P0P0 153 aa8.27□□□□□ -1.09
AFF3-209ENST00000430789 EMILIN1Q9Y6C2 1016 aa8.27□□□□□ -1.09
AFF3-209ENST00000430789 PARP3Q9Y6F1 533 aa8.27□□□□□ -1.09
AFF3-209ENST00000430789 BRCA1P38398 1863 aaKnown RBP8.27□□□□□ -1.09
AFF3-209ENST00000430789 KDM6AO15550 1401 aaPredicted RBP8.27□□□□□ -1.09
AFF3-209ENST00000430789 CNTNAP4Q9C0A0 1308 aa8.27□□□□□ -1.09
AFF3-209ENST00000430789 POTECB2RU33 542 aa8.26□□□□□ -1.09
AFF3-209ENST00000430789 SLC34A2O95436 690 aa8.26□□□□□ -1.09
AFF3-209ENST00000430789 DDR1Q08345 913 aa8.26□□□□□ -1.09
AFF3-209ENST00000430789 IFNL2Q8IZJ0 200 aa8.26□□□□□ -1.09
AFF3-209ENST00000430789 CARD14Q9BXL6 1004 aa8.26□□□□□ -1.09
AFF3-209ENST00000430789 WASHC2AQ641Q2 1341 aa8.26□□□□□ -1.09
AFF3-209ENST00000430789 C4AP0C0L4 1744 aa8.26□□□□□ -1.09
AFF3-209ENST00000430789 GLTPD2A6NH11 291 aa8.25□□□□□ -1.09
AFF3-209ENST00000430789 ERVV-2B6SEH9 535 aa8.25□□□□□ -1.09
AFF3-209ENST00000430789 SLC24A1O60721 1099 aa8.25□□□□□ -1.09
AFF3-209ENST00000430789 TM4SF1P30408 202 aa8.25□□□□□ -1.09
AFF3-209ENST00000430789 CHRNA5P30532 468 aa8.25□□□□□ -1.09
AFF3-209ENST00000430789 RFC4P35249 363 aa8.25□□□□□ -1.09
AFF3-209ENST00000430789 FKBP8Q14318 412 aa8.25□□□□□ -1.09
AFF3-209ENST00000430789 ZC3H4Q9UPT8 1303 aaKnown RBP8.25□□□□□ -1.09
AFF3-209ENST00000430789 ARFGEF1Q9Y6D6 1849 aa8.24□□□□□ -1.09
AFF3-209ENST00000430789 VEGFAP15692 232 aaPredicted RBP8.24□□□□□ -1.09
AFF3-209ENST00000430789 SRP68Q9UHB9 627 aaKnown RBP8.24□□□□□ -1.09
AFF3-209ENST00000430789 ZNF831Q5JPB2 1677 aa8.24□□□□□ -1.09
AFF3-209ENST00000430789 POLRMTO00411 1230 aaKnown RBP8.23□□□□□ -1.09
AFF3-209ENST00000430789 RBM42Q9BTD8 480 aaKnown RBP8.23□□□□□ -1.09
AFF3-209ENST00000430789 USP42Q9H9J4 1324 aaKnown RBP8.23□□□□□ -1.09
AFF3-209ENST00000430789 SBF1O95248 1867 aa8.22□□□□□ -1.09
AFF3-209ENST00000430789 LMNB1P20700 586 aa8.22□□□□□ -1.09
AFF3-209ENST00000430789 RASSF7Q02833 373 aa8.22□□□□□ -1.09
AFF3-209ENST00000430789 INTS5Q6P9B9 1019 aaKnown RBP8.22□□□□□ -1.09
AFF3-209ENST00000430789 POLKQ9UBT6 870 aa8.22□□□□□ -1.09
AFF3-209ENST00000430789 MYH14Q7Z406 1995 aaKnown RBP8.22□□□□□ -1.09
AFF3-209ENST00000430789 TNRC6CQ9HCJ0 1690 aaKnown RBP8.21□□□□□ -1.09
AFF3-209ENST00000430789 CRKLP46109 303 aaKnown RBP8.21□□□□□ -1.1
AFF3-209ENST00000430789 COL5A3P25940 1745 aaPredicted RBP8.2□□□□□ -1.1
AFF3-209ENST00000430789 NFKBIEO00221 500 aa8.2□□□□□ -1.1
AFF3-209ENST00000430789 FOXN1O15353 648 aa8.2□□□□□ -1.1
AFF3-209ENST00000430789 EIF4A2Q14240 407 aaKnown RBP8.2□□□□□ -1.1
AFF3-209ENST00000430789 PRDM10Q9NQV6 1147 aa8.2□□□□□ -1.1
AFF3-209ENST00000430789 ADAMTS7Q9UKP4 1686 aa8.19□□□□□ -1.1
AFF3-209ENST00000430789 PPM1GO15355 546 aaPredicted RBP8.19□□□□□ -1.1
AFF3-209ENST00000430789 PTCD1O75127 700 aaKnown RBP8.19□□□□□ -1.1
AFF3-209ENST00000430789 HSP90AB1P08238 724 aaKnown RBP8.19□□□□□ -1.1
AFF3-209ENST00000430789 CREBZFQ9NS37 354 aa8.19□□□□□ -1.1
AFF3-209ENST00000430789 ANKRD26Q9UPS8 1709 aa8.18□□□□□ -1.1
AFF3-209ENST00000430789 CABP4P57796 275 aa8.18□□□□□ -1.1
AFF3-209ENST00000430789 NFIXQ14938 502 aa8.18□□□□□ -1.1
AFF3-209ENST00000430789 USPL1Q5W0Q7 1092 aa8.18□□□□□ -1.1
AFF3-209ENST00000430789 TTLL6Q8N841 843 aa8.18□□□□□ -1.1
AFF3-209ENST00000430789 NFATC2IPQ8NCF5 419 aa8.18□□□□□ -1.1
AFF3-209ENST00000430789 BCL2L12Q9HB09 334 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms