RNA–Protein interactions for RNA: ENST00000430198.2

HMGA1P2-201, Transcript of high mobility group AT-hook 1 pseudogene 2, humanhuman

BASIC

Gene HMGA1P2, Length 324 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P2-201ENST00000430198 TONSLQ96HA7 1378 aa17.17■□□□□ 0.34
HMGA1P2-201ENST00000430198 PHKG2P15735 406 aa17.17■□□□□ 0.34
HMGA1P2-201ENST00000430198 COL13A1Q5TAT6 717 aaPredicted RBP17.17■□□□□ 0.34
HMGA1P2-201ENST00000430198 PKD1L3Q7Z443 1732 aa17.16■□□□□ 0.34
HMGA1P2-201ENST00000430198 TRAPPC3LQ5T215 181 aa17.16■□□□□ 0.34
HMGA1P2-201ENST00000430198 SPG7Q9UQ90 795 aa17.16■□□□□ 0.34
HMGA1P2-201ENST00000430198 NSD3Q9BZ95 1437 aa17.15■□□□□ 0.34
HMGA1P2-201ENST00000430198 TGFB2P61812 414 aa17.15■□□□□ 0.34
HMGA1P2-201ENST00000430198 CICQ96RK0 1608 aaPredicted RBP17.14■□□□□ 0.33
HMGA1P2-201ENST00000430198 NCAPD2Q15021 1401 aa17.14■□□□□ 0.33
HMGA1P2-201ENST00000430198 FCHSD2O94868 740 aa17.14■□□□□ 0.33
HMGA1P2-201ENST00000430198 GYS1P13807 737 aa17.14■□□□□ 0.33
HMGA1P2-201ENST00000430198 TMF1P82094 1093 aa17.14■□□□□ 0.33
HMGA1P2-201ENST00000430198 C9orf131Q5VYM1 1079 aa17.14■□□□□ 0.33
HMGA1P2-201ENST00000430198 IFNL2Q8IZJ0 200 aa17.13■□□□□ 0.33
HMGA1P2-201ENST00000430198 RBM42Q9BTD8 480 aaKnown RBP17.13■□□□□ 0.33
HMGA1P2-201ENST00000430198 POLKQ9UBT6 870 aa17.13■□□□□ 0.33
HMGA1P2-201ENST00000430198 WASHC2AQ641Q2 1341 aa17.13■□□□□ 0.33
HMGA1P2-201ENST00000430198 KIF13BQ9NQT8 1826 aa17.12■□□□□ 0.33
HMGA1P2-201ENST00000430198 NLGN1Q8N2Q7 840 aa17.12■□□□□ 0.33
HMGA1P2-201ENST00000430198 RTCBQ9Y3I0 505 aaKnown RBP17.12■□□□□ 0.33
HMGA1P2-201ENST00000430198 HMGB2P26583 209 aaKnown RBP17.11■□□□□ 0.33
HMGA1P2-201ENST00000430198 RRAGCQ9HB90 399 aa17.11■□□□□ 0.33
HMGA1P2-201ENST00000430198 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.11■□□□□ 0.33
HMGA1P2-201ENST00000430198 SRP68Q9UHB9 627 aaKnown RBP17.11■□□□□ 0.33
HMGA1P2-201ENST00000430198 KIF20BQ96Q89 1820 aa17.11■□□□□ 0.33
HMGA1P2-201ENST00000430198 KIF24Q5T7B8 1368 aa17.11■□□□□ 0.33
HMGA1P2-201ENST00000430198 C10orf71Q711Q0 1435 aa17.11■□□□□ 0.33
HMGA1P2-201ENST00000430198 CAPN15O75808 1086 aa17.1■□□□□ 0.33
HMGA1P2-201ENST00000430198 EIF4A2Q14240 407 aaKnown RBP17.1■□□□□ 0.33
HMGA1P2-201ENST00000430198 KDRP35968 1356 aa17.1■□□□□ 0.33
HMGA1P2-201ENST00000430198 MYH14Q7Z406 1995 aaKnown RBP17.09■□□□□ 0.33
HMGA1P2-201ENST00000430198 RPS6KA4O75676 772 aa17.09■□□□□ 0.33
HMGA1P2-201ENST00000430198 CHRNA5P30532 468 aa17.09■□□□□ 0.33
HMGA1P2-201ENST00000430198 TNNT2P45379 298 aaPredicted RBP17.09■□□□□ 0.33
HMGA1P2-201ENST00000430198 DDR1Q08345 913 aa17.09■□□□□ 0.33
HMGA1P2-201ENST00000430198 FKBP8Q14318 412 aa17.08■□□□□ 0.32
HMGA1P2-201ENST00000430198 RC3H1Q5TC82 1133 aaKnown RBP17.08■□□□□ 0.32
HMGA1P2-201ENST00000430198 RBM46Q8TBY0 533 aaKnown RBP17.08■□□□□ 0.32
HMGA1P2-201ENST00000430198 KLRG1Q96E93 195 aa17.08■□□□□ 0.32
HMGA1P2-201ENST00000430198 KCPQ6ZWJ8 1503 aa17.07■□□□□ 0.32
HMGA1P2-201ENST00000430198 RFC4P35249 363 aa17.07■□□□□ 0.32
HMGA1P2-201ENST00000430198 PRELPP51888 382 aa17.07■□□□□ 0.32
HMGA1P2-201ENST00000430198 CCDC87Q9NVE4 849 aa17.07■□□□□ 0.32
HMGA1P2-201ENST00000430198 PARP3Q9Y6F1 533 aa17.07■□□□□ 0.32
HMGA1P2-201ENST00000430198 BRCA1P38398 1863 aaKnown RBP17.06■□□□□ 0.32
HMGA1P2-201ENST00000430198 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
HMGA1P2-201ENST00000430198 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
HMGA1P2-201ENST00000430198 JMYQ8N9B5 988 aa17.06■□□□□ 0.32
HMGA1P2-201ENST00000430198 C4AP0C0L4 1744 aa17.06■□□□□ 0.32
HMGA1P2-201ENST00000430198 WDR90Q96KV7 1748 aa17.06■□□□□ 0.32
HMGA1P2-201ENST00000430198 DCAF5Q96JK2 942 aa17.05■□□□□ 0.32
HMGA1P2-201ENST00000430198 PIM2Q9P1W9 311 aa17.05■□□□□ 0.32
HMGA1P2-201ENST00000430198 ERVV-2B6SEH9 535 aa17.04■□□□□ 0.32
HMGA1P2-201ENST00000430198 RNF181Q9P0P0 153 aa17.04■□□□□ 0.32
HMGA1P2-201ENST00000430198 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
HMGA1P2-201ENST00000430198 CNTNAP4Q9C0A0 1308 aa17.03■□□□□ 0.32
HMGA1P2-201ENST00000430198 AEBP1Q8IUX7 1158 aa17.03■□□□□ 0.32
HMGA1P2-201ENST00000430198 NFATC2IPQ8NCF5 419 aa17.03■□□□□ 0.32
HMGA1P2-201ENST00000430198 CRKLP46109 303 aaKnown RBP17.02■□□□□ 0.32
HMGA1P2-201ENST00000430198 DALRD3Q5D0E6 543 aaKnown RBP17.02■□□□□ 0.32
HMGA1P2-201ENST00000430198 INTS5Q6P9B9 1019 aaKnown RBP17.02■□□□□ 0.32
HMGA1P2-201ENST00000430198 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
HMGA1P2-201ENST00000430198 ANKRD26Q9UPS8 1709 aa17.01■□□□□ 0.31
HMGA1P2-201ENST00000430198 ADRA2BP18089 450 aa17.01■□□□□ 0.31
HMGA1P2-201ENST00000430198 TM4SF1P30408 202 aa17.01■□□□□ 0.31
HMGA1P2-201ENST00000430198 CABP4P57796 275 aa17.01■□□□□ 0.31
HMGA1P2-201ENST00000430198 RASSF7Q02833 373 aa17.01■□□□□ 0.31
HMGA1P2-201ENST00000430198 C16orf71Q8IYS4 520 aaPredicted RBP17.01■□□□□ 0.31
HMGA1P2-201ENST00000430198 SBF1O95248 1867 aa17■□□□□ 0.31
HMGA1P2-201ENST00000430198 FSTL1Q12841 308 aa17■□□□□ 0.31
HMGA1P2-201ENST00000430198 ZNF530Q6P9A1 599 aaPredicted RBP17■□□□□ 0.31
HMGA1P2-201ENST00000430198 PCNTO95613 3336 aa16.99■□□□□ 0.31
HMGA1P2-201ENST00000430198 ARFGEF1Q9Y6D6 1849 aa16.99■□□□□ 0.31
HMGA1P2-201ENST00000430198 POLRMTO00411 1230 aaKnown RBP16.99■□□□□ 0.31
HMGA1P2-201ENST00000430198 USP42Q9H9J4 1324 aaKnown RBP16.98■□□□□ 0.31
HMGA1P2-201ENST00000430198 PLEKHO1Q53GL0 409 aaPredicted RBP16.98■□□□□ 0.31
HMGA1P2-201ENST00000430198 POLR3GLQ9BT43 218 aa16.98■□□□□ 0.31
HMGA1P2-201ENST00000430198 POTECB2RU33 542 aa16.97■□□□□ 0.31
HMGA1P2-201ENST00000430198 MTHFSP49914 203 aa16.97■□□□□ 0.31
HMGA1P2-201ENST00000430198 CDCA8Q53HL2 280 aa16.97■□□□□ 0.31
HMGA1P2-201ENST00000430198 USPL1Q5W0Q7 1092 aa16.97■□□□□ 0.31
HMGA1P2-201ENST00000430198 DNAJC10Q8IXB1 793 aa16.97■□□□□ 0.31
HMGA1P2-201ENST00000430198 TNS4Q8IZW8 715 aa16.97■□□□□ 0.31
HMGA1P2-201ENST00000430198 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.31
HMGA1P2-201ENST00000430198 LGR6Q9HBX8 967 aa16.96■□□□□ 0.31
HMGA1P2-201ENST00000430198 ZNF831Q5JPB2 1677 aa16.96■□□□□ 0.31
HMGA1P2-201ENST00000430198 ADAMTS7Q9UKP4 1686 aa16.95■□□□□ 0.3
HMGA1P2-201ENST00000430198 BCL2L12Q9HB09 334 aa16.95■□□□□ 0.3
HMGA1P2-201ENST00000430198 NFIXQ14938 502 aa16.94■□□□□ 0.3
HMGA1P2-201ENST00000430198 TJP1Q07157 1748 aa16.93■□□□□ 0.3
HMGA1P2-201ENST00000430198 PLEKHG2Q9H7P9 1386 aa16.93■□□□□ 0.3
HMGA1P2-201ENST00000430198 HSP90AB1P08238 724 aaKnown RBP16.93■□□□□ 0.3
HMGA1P2-201ENST00000430198 SLC39A6Q13433 755 aa16.93■□□□□ 0.3
HMGA1P2-201ENST00000430198 SMC1BQ8NDV3 1235 aa16.93■□□□□ 0.3
HMGA1P2-201ENST00000430198 HSPA1AP0DMV8 641 aaKnown RBP16.92■□□□□ 0.3
HMGA1P2-201ENST00000430198 HSPA1BP0DMV9 641 aaKnown RBP16.92■□□□□ 0.3
HMGA1P2-201ENST00000430198 GLTPD2A6NH11 291 aa16.91■□□□□ 0.3
HMGA1P2-201ENST00000430198 SULT6B1Q6IMI4 303 aa16.91■□□□□ 0.3
HMGA1P2-201ENST00000430198 CCDC24Q8N4L8 307 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms