RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 ITPRIPQ8IWB1 547 aa28.2■■■□□ 2.11
VSX1-205ENST00000429762 IFNL2Q8IZJ0 200 aa28.2■■■□□ 2.11
VSX1-205ENST00000429762 MS4A1P11836 297 aa28.19■■■□□ 2.1
VSX1-205ENST00000429762 IL2RBP14784 551 aa28.17■■■□□ 2.1
VSX1-205ENST00000429762 PLCH1Q4KWH8 1693 aa28.17■■■□□ 2.1
VSX1-205ENST00000429762 EIF4A1P60842 406 aaKnown RBP28.17■■■□□ 2.1
VSX1-205ENST00000429762 ZCRB1Q8TBF4 217 aaKnown RBP28.16■■■□□ 2.1
VSX1-205ENST00000429762 SLC4A2P04920 1241 aa28.15■■■□□ 2.1
VSX1-205ENST00000429762 CERKQ8TCT0 537 aa28.15■■■□□ 2.1
VSX1-205ENST00000429762 SHANK3Q9BYB0 1731 aa28.14■■■□□ 2.1
VSX1-205ENST00000429762 G2E3Q7L622 706 aa28.14■■■□□ 2.1
VSX1-205ENST00000429762 ARHGAP45Q92619 1136 aa28.14■■■□□ 2.1
VSX1-205ENST00000429762 PLEKHG2Q9H7P9 1386 aa28.14■■■□□ 2.09
VSX1-205ENST00000429762 KDM2BQ8NHM5 1336 aa28.13■■■□□ 2.09
VSX1-205ENST00000429762 SKAP1Q86WV1 359 aa28.12■■■□□ 2.09
VSX1-205ENST00000429762 SLC52A2Q9HAB3 445 aa28.12■■■□□ 2.09
VSX1-205ENST00000429762 SLC39A6Q13433 755 aa28.11■■■□□ 2.09
VSX1-205ENST00000429762 NFATC2IPQ8NCF5 419 aa28.11■■■□□ 2.09
VSX1-205ENST00000429762 DDX54Q8TDD1 881 aaKnown RBP28.11■■■□□ 2.09
VSX1-205ENST00000429762 PCDHB15Q9Y5E8 787 aa28.11■■■□□ 2.09
VSX1-205ENST00000429762 ABCC4O15439 1325 aa28.11■■■□□ 2.09
VSX1-205ENST00000429762 PCDH11XQ9BZA7 1347 aa28.11■■■□□ 2.09
VSX1-205ENST00000429762 PCDH11YQ9BZA8 1340 aa28.11■■■□□ 2.09
VSX1-205ENST00000429762 DCAF5Q96JK2 942 aa28.11■■■□□ 2.09
VSX1-205ENST00000429762 API5Q9BZZ5 524 aaKnown RBP28.11■■■□□ 2.09
VSX1-205ENST00000429762 DDX19BQ9UMR2 479 aa28.1■■■□□ 2.09
VSX1-205ENST00000429762 RGS12O14924 1447 aa28.1■■■□□ 2.09
VSX1-205ENST00000429762 IGHDP01880 384 aa28.1■■■□□ 2.09
VSX1-205ENST00000429762 EIF2S2P20042 333 aaKnown RBP28.1■■■□□ 2.09
VSX1-205ENST00000429762 HDGFL1Q5TGJ6 251 aa28.09■■■□□ 2.09
VSX1-205ENST00000429762 CCDC30Q5VVM6 783 aa28.09■■■□□ 2.09
VSX1-205ENST00000429762 STK31Q9BXU1 1019 aa28.09■■■□□ 2.09
VSX1-205ENST00000429762 NRAPQ86VF7 1730 aa28.09■■■□□ 2.09
VSX1-205ENST00000429762 PRAMEF22A3QJZ6 481 aa28.07■■■□□ 2.08
VSX1-205ENST00000429762 MRC1P22897 1456 aa28.07■■■□□ 2.08
VSX1-205ENST00000429762 HSP90AB1P08238 724 aaKnown RBP28.06■■■□□ 2.08
VSX1-205ENST00000429762 CENPQQ7L2Z9 268 aaPredicted RBP28.06■■■□□ 2.08
VSX1-205ENST00000429762 CABP4P57796 275 aa28.04■■■□□ 2.08
VSX1-205ENST00000429762 PTPRCP08575 1304 aa28.04■■■□□ 2.08
VSX1-205ENST00000429762 SOS1Q07889 1333 aaPredicted RBP28.04■■■□□ 2.08
VSX1-205ENST00000429762 DISP2A7MBM2 1401 aa28.03■■■□□ 2.08
VSX1-205ENST00000429762 ZNF790Q6PG37 636 aa28.03■■■□□ 2.08
VSX1-205ENST00000429762 TSHZ2Q9NRE2 1034 aa28.03■■■□□ 2.08
VSX1-205ENST00000429762 F6X3S4 739 aa28.02■■■□□ 2.08
VSX1-205ENST00000429762 AAMPQ13685 434 aa28.02■■■□□ 2.08
VSX1-205ENST00000429762 ZBTB40Q9NUA8 1239 aa28.02■■■□□ 2.08
VSX1-205ENST00000429762 WNK3Q9BYP7 1800 aa28.02■■■□□ 2.08
VSX1-205ENST00000429762 JCADQ9P266 1359 aa28.02■■■□□ 2.08
VSX1-205ENST00000429762 GIGYF1O75420 1035 aaPredicted RBP28.01■■■□□ 2.07
VSX1-205ENST00000429762 CHPF2Q9P2E5 772 aa28.01■■■□□ 2.07
VSX1-205ENST00000429762 C5P01031 1676 aa28.01■■■□□ 2.07
VSX1-205ENST00000429762 ANXA1P04083 346 aa28■■■□□ 2.07
VSX1-205ENST00000429762 FLIIQ13045 1269 aa28■■■□□ 2.07
VSX1-205ENST00000429762 HEG1Q9ULI3 1381 aa28■■■□□ 2.07
VSX1-205ENST00000429762 ZBTB7BO15156 539 aaPredicted RBP28■■■□□ 2.07
VSX1-205ENST00000429762 C1orf115Q9H7X2 142 aa28■■■□□ 2.07
VSX1-205ENST00000429762 PHAXQ9H814 394 aaKnown RBP28■■■□□ 2.07
VSX1-205ENST00000429762 TOGARAM1Q9Y4F4 1720 aa28■■■□□ 2.07
VSX1-205ENST00000429762 HOXB7P09629 217 aa27.99■■■□□ 2.07
VSX1-205ENST00000429762 FKBP5Q13451 457 aaPredicted RBP27.98■■■□□ 2.07
VSX1-205ENST00000429762 NKX1-1Q15270 411 aaPredicted RBP27.98■■■□□ 2.07
VSX1-205ENST00000429762 SLC4A10Q6U841 1118 aa27.98■■■□□ 2.07
VSX1-205ENST00000429762 CACNA1FO60840 1977 aa27.97■■■□□ 2.07
VSX1-205ENST00000429762 ZNF496Q96IT1 587 aaPredicted RBP27.97■■■□□ 2.07
VSX1-205ENST00000429762 C8orf37Q96NL8 207 aa27.97■■■□□ 2.07
VSX1-205ENST00000429762 SLIT2O94813 1529 aa27.97■■■□□ 2.07
VSX1-205ENST00000429762 INTS3Q68E01 1043 aaKnown RBP27.97■■■□□ 2.07
VSX1-205ENST00000429762 NWD2Q9ULI1 1742 aa27.96■■■□□ 2.07
VSX1-205ENST00000429762 SPATA31A1Q5TZJ5 1347 aa27.96■■■□□ 2.07
VSX1-205ENST00000429762 CCDC9Q9Y3X0 531 aaKnown RBP27.96■■■□□ 2.07
VSX1-205ENST00000429762 TTC5Q8N0Z6 440 aa27.95■■■□□ 2.07
VSX1-205ENST00000429762 PROSER3Q2NL68 480 aa27.94■■■□□ 2.06
VSX1-205ENST00000429762 LRP6O75581 1613 aa27.93■■■□□ 2.06
VSX1-205ENST00000429762 HSPA1LP34931 641 aa27.93■■■□□ 2.06
VSX1-205ENST00000429762 ERVV-2B6SEH9 535 aa27.93■■■□□ 2.06
VSX1-205ENST00000429762 NGLY1Q96IV0 654 aa27.91■■■□□ 2.06
VSX1-205ENST00000429762 RWDD1Q9H446 243 aaPredicted RBP27.91■■■□□ 2.06
VSX1-205ENST00000429762 SPATA31A5Q5VU36 1347 aa27.9■■■□□ 2.06
VSX1-205ENST00000429762 SPATA31A7Q8IWB4 1347 aa27.9■■■□□ 2.06
VSX1-205ENST00000429762 GLI3P10071 1580 aa27.9■■■□□ 2.06
VSX1-205ENST00000429762 EXOC5O00471 708 aa27.9■■■□□ 2.06
VSX1-205ENST00000429762 FMNL2Q96PY5 1086 aa27.89■■■□□ 2.06
VSX1-205ENST00000429762 PAPPAQ13219 1627 aa27.88■■■□□ 2.05
VSX1-205ENST00000429762 MEIS3Q99687 375 aa27.88■■■□□ 2.05
VSX1-205ENST00000429762 DBF4Q9UBU7 674 aaPredicted RBP27.88■■■□□ 2.05
VSX1-205ENST00000429762 TNS2Q63HR2 1409 aa27.88■■■□□ 2.05
VSX1-205ENST00000429762 UNC5CLQ8IV45 518 aa27.87■■■□□ 2.05
VSX1-205ENST00000429762 USP16Q9Y5T5 823 aa27.87■■■□□ 2.05
VSX1-205ENST00000429762 PIP4K2AP48426 406 aaPredicted RBP27.86■■■□□ 2.05
VSX1-205ENST00000429762 RGS3P49796 1198 aa27.86■■■□□ 2.05
VSX1-205ENST00000429762 CHMP4BQ9H444 224 aaKnown RBP27.86■■■□□ 2.05
VSX1-205ENST00000429762 UBR2Q8IWV8 1755 aa27.86■■■□□ 2.05
VSX1-205ENST00000429762 SNRPA1P09661 255 aaKnown RBP27.86■■■□□ 2.05
VSX1-205ENST00000429762 CCT4P50991 539 aaKnown RBP27.86■■■□□ 2.05
VSX1-205ENST00000429762 TMOD3Q9NYL9 352 aa27.86■■■□□ 2.05
VSX1-205ENST00000429762 ITGB4P16144 1822 aa27.85■■■□□ 2.05
VSX1-205ENST00000429762 BCL9LQ86UU0 1499 aa27.85■■■□□ 2.05
VSX1-205ENST00000429762 KCPQ6ZWJ8 1503 aa27.85■■■□□ 2.05
VSX1-205ENST00000429762 HDAC1Q13547 482 aaPredicted RBP27.85■■■□□ 2.05
VSX1-205ENST00000429762 CHMP4AQ9BY43 222 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms