RNA–Protein interactions for RNA: ENST00000429617.5

CASP7-206, Transcript of caspase 7, humanhuman

TSL 3

Gene CASP7, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-206ENST00000429617 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
CASP7-206ENST00000429617 C1QTNF8P60827 252 aa16.23■□□□□ 0.19
CASP7-206ENST00000429617 SPG7Q9UQ90 795 aa16.23■□□□□ 0.19
CASP7-206ENST00000429617 LINC00116Q8NCU8 138 aa16.22■□□□□ 0.19
CASP7-206ENST00000429617 FLAD1Q8NFF5 587 aa16.22■□□□□ 0.19
CASP7-206ENST00000429617 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.22■□□□□ 0.19
CASP7-206ENST00000429617 GOLGB1Q14789 3259 aaKnown RBP16.21■□□□□ 0.19
CASP7-206ENST00000429617 LOC102724428A0A0B4J2F2 783 aa16.21■□□□□ 0.19
CASP7-206ENST00000429617 PHKG2P15735 406 aa16.21■□□□□ 0.19
CASP7-206ENST00000429617 SIK1P57059 783 aa16.21■□□□□ 0.19
CASP7-206ENST00000429617 ITPK1Q13572 414 aa16.21■□□□□ 0.19
CASP7-206ENST00000429617 EIF4A2Q14240 407 aaKnown RBP16.21■□□□□ 0.19
CASP7-206ENST00000429617 AK7Q96M32 723 aa16.21■□□□□ 0.19
CASP7-206ENST00000429617 ASAP1Q9ULH1 1129 aa16.21■□□□□ 0.19
CASP7-206ENST00000429617 CD2APQ9Y5K6 639 aa16.21■□□□□ 0.19
CASP7-206ENST00000429617 GTF3C3Q9Y5Q9 886 aa16.21■□□□□ 0.19
CASP7-206ENST00000429617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.2■□□□□ 0.18
CASP7-206ENST00000429617 PHF14O94880 888 aa16.2■□□□□ 0.18
CASP7-206ENST00000429617 ZBED9Q6R2W3 1325 aa16.19■□□□□ 0.18
CASP7-206ENST00000429617 KDRP35968 1356 aa16.19■□□□□ 0.18
CASP7-206ENST00000429617 PPP2R1AP30153 589 aa16.19■□□□□ 0.18
CASP7-206ENST00000429617 TNNT2P45379 298 aaPredicted RBP16.19■□□□□ 0.18
CASP7-206ENST00000429617 TMOD3Q9NYL9 352 aa16.19■□□□□ 0.18
CASP7-206ENST00000429617 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
CASP7-206ENST00000429617 SENP3-EIF4A1A0A087X0R7 540 aa16.18■□□□□ 0.18
CASP7-206ENST00000429617 GRIN3BO60391 1043 aa16.18■□□□□ 0.18
CASP7-206ENST00000429617 HMGB2P26583 209 aaKnown RBP16.18■□□□□ 0.18
CASP7-206ENST00000429617 IGSF1Q8N6C5 1336 aa16.18■□□□□ 0.18
CASP7-206ENST00000429617 SSFA2P28290 1259 aa16.17■□□□□ 0.18
CASP7-206ENST00000429617 IFNL2Q8IZJ0 200 aa16.17■□□□□ 0.18
CASP7-206ENST00000429617 ATG3Q9NT62 314 aa16.17■□□□□ 0.18
CASP7-206ENST00000429617 GIGYF1O75420 1035 aaPredicted RBP16.16■□□□□ 0.18
CASP7-206ENST00000429617 SLC4A9Q96Q91 983 aa16.16■□□□□ 0.18
CASP7-206ENST00000429617 ATP10DQ9P241 1426 aa16.16■□□□□ 0.18
CASP7-206ENST00000429617 ADCY9O60503 1353 aa16.15■□□□□ 0.18
CASP7-206ENST00000429617 GNPATO15228 680 aa16.15■□□□□ 0.18
CASP7-206ENST00000429617 KDM6AO15550 1401 aaPredicted RBP16.15■□□□□ 0.18
CASP7-206ENST00000429617 MORC1Q86VD1 984 aa16.15■□□□□ 0.18
CASP7-206ENST00000429617 ZNF831Q5JPB2 1677 aa16.14■□□□□ 0.18
CASP7-206ENST00000429617 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
CASP7-206ENST00000429617 COL5A3P25940 1745 aaPredicted RBP16.13■□□□□ 0.17
CASP7-206ENST00000429617 KIAA1551Q9HCM1 1747 aa16.13■□□□□ 0.17
CASP7-206ENST00000429617 WDR43Q15061 677 aaKnown RBP eCLIP16.12■□□□□ 0.17
CASP7-206ENST00000429617 WWC3Q9ULE0 1092 aa16.12■□□□□ 0.17
CASP7-206ENST00000429617 ERVV-2B6SEH9 535 aa16.11■□□□□ 0.17
CASP7-206ENST00000429617 AEBP1Q8IUX7 1158 aa16.11■□□□□ 0.17
CASP7-206ENST00000429617 CICQ96RK0 1608 aaPredicted RBP16.11■□□□□ 0.17
CASP7-206ENST00000429617 PXDNLA1KZ92 1463 aa16.1■□□□□ 0.17
CASP7-206ENST00000429617 KIF13BQ9NQT8 1826 aa16.1■□□□□ 0.17
CASP7-206ENST00000429617 DCAF5Q96JK2 942 aa16.1■□□□□ 0.17
CASP7-206ENST00000429617 MMP10P09238 476 aa16.09■□□□□ 0.17
CASP7-206ENST00000429617 ZNF530Q6P9A1 599 aaPredicted RBP16.09■□□□□ 0.17
CASP7-206ENST00000429617 C4AP0C0L4 1744 aa16.08■□□□□ 0.17
CASP7-206ENST00000429617 MYH14Q7Z406 1995 aaKnown RBP16.08■□□□□ 0.16
CASP7-206ENST00000429617 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.16
CASP7-206ENST00000429617 CFAP53Q96M91 514 aa16.08■□□□□ 0.16
CASP7-206ENST00000429617 CNTNAP4Q9C0A0 1308 aa16.08■□□□□ 0.16
CASP7-206ENST00000429617 C10orf71Q711Q0 1435 aa16.08■□□□□ 0.16
CASP7-206ENST00000429617 HSP90AB1P08238 724 aaKnown RBP16.07■□□□□ 0.16
CASP7-206ENST00000429617 RC3H1Q5TC82 1133 aaKnown RBP16.07■□□□□ 0.16
CASP7-206ENST00000429617 RBM42Q9BTD8 480 aaKnown RBP16.07■□□□□ 0.16
CASP7-206ENST00000429617 N4BP2Q86UW6 1770 aaPredicted RBP16.06■□□□□ 0.16
CASP7-206ENST00000429617 TJP1Q07157 1748 aa16.06■□□□□ 0.16
CASP7-206ENST00000429617 NEFLP07196 543 aa16.06■□□□□ 0.16
CASP7-206ENST00000429617 AMOTQ4VCS5 1084 aa16.06■□□□□ 0.16
CASP7-206ENST00000429617 ARHGEF1Q92888 912 aaKnown RBP16.06■□□□□ 0.16
CASP7-206ENST00000429617 RTCBQ9Y3I0 505 aaKnown RBP16.06■□□□□ 0.16
CASP7-206ENST00000429617 GYS1P13807 737 aa16.05■□□□□ 0.16
CASP7-206ENST00000429617 CABP4P57796 275 aa16.05■□□□□ 0.16
CASP7-206ENST00000429617 TRAPPC3LQ5T215 181 aa16.05■□□□□ 0.16
CASP7-206ENST00000429617 RPS6KA4O75676 772 aa16.04■□□□□ 0.16
CASP7-206ENST00000429617 IL13P35225 146 aa16.04■□□□□ 0.16
CASP7-206ENST00000429617 ZNF526Q8TF50 670 aaPredicted RBP16.04■□□□□ 0.16
CASP7-206ENST00000429617 GPBP1L1Q9HC44 474 aaPredicted RBP16.04■□□□□ 0.16
CASP7-206ENST00000429617 ADAMTS8Q9UP79 889 aa16.04■□□□□ 0.16
CASP7-206ENST00000429617 SCN11AQ9UI33 1791 aa16.04■□□□□ 0.16
CASP7-206ENST00000429617 ADAMTS7Q9UKP4 1686 aa16.03■□□□□ 0.16
CASP7-206ENST00000429617 MTHFSP49914 203 aa16.03■□□□□ 0.16
CASP7-206ENST00000429617 SULT6B1Q6IMI4 303 aa16.03■□□□□ 0.16
CASP7-206ENST00000429617 NLGN1Q8N2Q7 840 aa16.03■□□□□ 0.16
CASP7-206ENST00000429617 BRCA1P38398 1863 aaKnown RBP16.02■□□□□ 0.16
CASP7-206ENST00000429617 PTCD1O75127 700 aaKnown RBP16.02■□□□□ 0.16
CASP7-206ENST00000429617 CRKLP46109 303 aaKnown RBP16.02■□□□□ 0.16
CASP7-206ENST00000429617 NGEFQ8N5V2 710 aa16.02■□□□□ 0.16
CASP7-206ENST00000429617 NFATC2IPQ8NCF5 419 aa16.02■□□□□ 0.16
CASP7-206ENST00000429617 A0A0G2JLW4 131 aa16.01■□□□□ 0.15
CASP7-206ENST00000429617 C1orf141Q5JVX7 400 aa16.01■□□□□ 0.15
CASP7-206ENST00000429617 CEP350Q5VT06 3117 aa16.01■□□□□ 0.15
CASP7-206ENST00000429617 MRC1P22897 1456 aa16■□□□□ 0.15
CASP7-206ENST00000429617 DPEP1P16444 411 aa16■□□□□ 0.15
CASP7-206ENST00000429617 RFC4P35249 363 aa16■□□□□ 0.15
CASP7-206ENST00000429617 TGFB2P61812 414 aa16■□□□□ 0.15
CASP7-206ENST00000429617 SRP68Q9UHB9 627 aaKnown RBP16■□□□□ 0.15
CASP7-206ENST00000429617 KIF3CO14782 793 aa15.99■□□□□ 0.15
CASP7-206ENST00000429617 NUDCQ9Y266 331 aa15.99■□□□□ 0.15
CASP7-206ENST00000429617 USP42Q9H9J4 1324 aaKnown RBP15.98■□□□□ 0.15
CASP7-206ENST00000429617 KCNA3P22001 575 aa15.98■□□□□ 0.15
CASP7-206ENST00000429617 DDR1Q08345 913 aa15.98■□□□□ 0.15
CASP7-206ENST00000429617 INTS5Q6P9B9 1019 aaKnown RBP15.98■□□□□ 0.15
CASP7-206ENST00000429617 CCDC87Q9NVE4 849 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms