RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-208ENST00000428950 FNBP4Q8N3X1 1017 aaPredicted RBP6.91□□□□□ -1.3
CCDC144A-208ENST00000428950 LZTS3O60299 673 aaPredicted RBP6.9□□□□□ -1.3
CCDC144A-208ENST00000428950 GDF11O95390 407 aa6.9□□□□□ -1.3
CCDC144A-208ENST00000428950 INHAP05111 366 aa6.9□□□□□ -1.3
CCDC144A-208ENST00000428950 GTF2E1P29083 439 aaPredicted RBP6.9□□□□□ -1.3
CCDC144A-208ENST00000428950 NCOA4Q13772 614 aa6.9□□□□□ -1.3
CCDC144A-208ENST00000428950 TLR1Q15399 786 aa6.9□□□□□ -1.3
CCDC144A-208ENST00000428950 GNASQ5JWF2 1037 aa6.9□□□□□ -1.3
CCDC144A-208ENST00000428950 HDGFL1Q5TGJ6 251 aa6.9□□□□□ -1.3
CCDC144A-208ENST00000428950 UCN2Q96RP3 112 aa6.9□□□□□ -1.3
CCDC144A-208ENST00000428950 COL25A1Q9BXS0 654 aaPredicted RBP6.9□□□□□ -1.3
CCDC144A-208ENST00000428950 TIMMDC1Q9NPL8 285 aa6.9□□□□□ -1.3
CCDC144A-208ENST00000428950 NOD1Q9Y239 953 aa6.9□□□□□ -1.3
CCDC144A-208ENST00000428950 A6NJR5 290 aa6.89□□□□□ -1.31
CCDC144A-208ENST00000428950 TMEM214Q6NUQ4 689 aaKnown RBP6.89□□□□□ -1.31
CCDC144A-208ENST00000428950 RIPOR1Q6ZS17 1223 aa6.89□□□□□ -1.31
CCDC144A-208ENST00000428950 KRTAP1-3Q8IUG1 177 aa6.89□□□□□ -1.31
CCDC144A-208ENST00000428950 TRIM22Q8IYM9 498 aa6.89□□□□□ -1.31
CCDC144A-208ENST00000428950 ZNF837Q96EG3 531 aaPredicted RBP6.89□□□□□ -1.31
CCDC144A-208ENST00000428950 GMCL1Q96IK5 515 aa6.89□□□□□ -1.31
CCDC144A-208ENST00000428950 PSMG3-AS1Q96PY0 264 aa6.89□□□□□ -1.31
CCDC144A-208ENST00000428950 GAS2L1Q99501 681 aaPredicted RBP6.89□□□□□ -1.31
CCDC144A-208ENST00000428950 PCDHGA11Q9Y5H2 935 aa6.89□□□□□ -1.31
CCDC144A-208ENST00000428950 GTF2IP78347 998 aa6.88□□□□□ -1.31
CCDC144A-208ENST00000428950 C4orf17Q53FE4 359 aa6.88□□□□□ -1.31
CCDC144A-208ENST00000428950 RNFT1Q5M7Z0 435 aa6.88□□□□□ -1.31
CCDC144A-208ENST00000428950 PLEKHM2Q8IWE5 1019 aa6.88□□□□□ -1.31
CCDC144A-208ENST00000428950 DEPDC4Q8N2C3 294 aa6.88□□□□□ -1.31
CCDC144A-208ENST00000428950 GLMNQ92990 594 aa6.88□□□□□ -1.31
CCDC144A-208ENST00000428950 CNTNAP3BQ96NU0 1288 aa6.88□□□□□ -1.31
CCDC144A-208ENST00000428950 CNTNAP3Q9BZ76 1288 aa6.88□□□□□ -1.31
CCDC144A-208ENST00000428950 A0A1B0GTH6 734 aa6.87□□□□□ -1.31
CCDC144A-208ENST00000428950 USP17L3A6NCW0 530 aa6.87□□□□□ -1.31
CCDC144A-208ENST00000428950 USP17L4A6NCW7 530 aa6.87□□□□□ -1.31
CCDC144A-208ENST00000428950 TMEM229AB2RXF0 380 aa6.87□□□□□ -1.31
CCDC144A-208ENST00000428950 H7C1W4 665 aa6.87□□□□□ -1.31
CCDC144A-208ENST00000428950 ATP9BO43861 1147 aa6.87□□□□□ -1.31
CCDC144A-208ENST00000428950 F11P03951 625 aa6.87□□□□□ -1.31
CCDC144A-208ENST00000428950 PHKA2P46019 1235 aa6.87□□□□□ -1.31
CCDC144A-208ENST00000428950 USP17L2Q6R6M4 530 aa6.87□□□□□ -1.31
CCDC144A-208ENST00000428950 TBC1D9Q6ZT07 1266 aa6.87□□□□□ -1.31
CCDC144A-208ENST00000428950 USP17L1Q7RTZ2 530 aa6.87□□□□□ -1.31
CCDC144A-208ENST00000428950 PPARGC1BQ86YN6 1023 aaKnown RBP6.87□□□□□ -1.31
CCDC144A-208ENST00000428950 RHBDD1Q8TEB9 315 aa6.87□□□□□ -1.31
CCDC144A-208ENST00000428950 SMTNP53814 917 aa6.86□□□□□ -1.31
CCDC144A-208ENST00000428950 RASSF7Q02833 373 aa6.86□□□□□ -1.31
CCDC144A-208ENST00000428950 PSME1Q06323 249 aa6.86□□□□□ -1.31
CCDC144A-208ENST00000428950 DBN1Q16643 649 aa6.86□□□□□ -1.31
CCDC144A-208ENST00000428950 SERTAD1Q9UHV2 236 aa6.86□□□□□ -1.31
CCDC144A-208ENST00000428950 GAS6Q14393 721 aa6.85□□□□□ -1.31
CCDC144A-208ENST00000428950 TRIM50Q86XT4 487 aa6.85□□□□□ -1.31
CCDC144A-208ENST00000428950 GTPBP3Q969Y2 492 aaKnown RBP6.85□□□□□ -1.31
CCDC144A-208ENST00000428950 SLC4A9Q96Q91 983 aa6.85□□□□□ -1.31
CCDC144A-208ENST00000428950 NUCKS1Q9H1E3 243 aaKnown RBP6.85□□□□□ -1.31
CCDC144A-208ENST00000428950 PLA2G4AP47712 749 aa6.84□□□□□ -1.31
CCDC144A-208ENST00000428950 MTFR1Q15390 333 aa6.84□□□□□ -1.31
CCDC144A-208ENST00000428950 FOXR1Q6PIV2 292 aa6.84□□□□□ -1.31
CCDC144A-208ENST00000428950 GPAMQ9HCL2 828 aa6.84□□□□□ -1.31
CCDC144A-208ENST00000428950 A6NJY4 79 aa6.83□□□□□ -1.32
CCDC144A-208ENST00000428950 GPR25O00155 361 aa6.83□□□□□ -1.32
CCDC144A-208ENST00000428950 BACH1O14867 736 aa6.83□□□□□ -1.32
CCDC144A-208ENST00000428950 SLURP2P0DP57 97 aa6.83□□□□□ -1.32
CCDC144A-208ENST00000428950 MSX1P28360 303 aa6.83□□□□□ -1.32
CCDC144A-208ENST00000428950 ATP1A2P50993 1020 aa6.83□□□□□ -1.32
CCDC144A-208ENST00000428950 NIFKQ9BYG3 293 aaKnown RBP6.83□□□□□ -1.32
CCDC144A-208ENST00000428950 ZNF358Q9NW07 568 aa6.83□□□□□ -1.32
CCDC144A-208ENST00000428950 CDK2AP1O14519 115 aa6.82□□□□□ -1.32
CCDC144A-208ENST00000428950 THBS1P07996 1170 aa6.82□□□□□ -1.32
CCDC144A-208ENST00000428950 ZNF295-AS1Q8N0V1 137 aa6.82□□□□□ -1.32
CCDC144A-208ENST00000428950 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.82□□□□□ -1.32
CCDC144A-208ENST00000428950 CALR3Q96L12 384 aaKnown RBP6.82□□□□□ -1.32
CCDC144A-208ENST00000428950 TRERF1Q96PN7 1200 aa6.82□□□□□ -1.32
CCDC144A-208ENST00000428950 IQSEC3Q9UPP2 1182 aaPredicted RBP6.82□□□□□ -1.32
CCDC144A-208ENST00000428950 KIAA1024Q9UPX6 916 aa6.82□□□□□ -1.32
CCDC144A-208ENST00000428950 MAFBQ9Y5Q3 323 aaPredicted RBP6.82□□□□□ -1.32
CCDC144A-208ENST00000428950 USP3Q9Y6I4 520 aa6.82□□□□□ -1.32
CCDC144A-208ENST00000428950 CSB-PGBD3P0DP91 1061 aa6.81□□□□□ -1.32
CCDC144A-208ENST00000428950 CLDN10P78369 228 aa6.81□□□□□ -1.32
CCDC144A-208ENST00000428950 LBRQ14739 615 aaKnown RBP6.81□□□□□ -1.32
CCDC144A-208ENST00000428950 GPAT2Q6NUI2 795 aa6.81□□□□□ -1.32
CCDC144A-208ENST00000428950 PGBD3Q8N328 593 aa6.81□□□□□ -1.32
CCDC144A-208ENST00000428950 TPCN2Q8NHX9 752 aa6.81□□□□□ -1.32
CCDC144A-208ENST00000428950 RUBCNLQ9H714 662 aa6.81□□□□□ -1.32
CCDC144A-208ENST00000428950 MBIPQ9NS73 344 aa6.81□□□□□ -1.32
CCDC144A-208ENST00000428950 DNAAF2Q9NVR5 837 aaKnown RBP6.81□□□□□ -1.32
CCDC144A-208ENST00000428950 TFIP11Q9UBB9 837 aaKnown RBP6.81□□□□□ -1.32
CCDC144A-208ENST00000428950 MKRN1Q9UHC7 482 aaKnown RBP6.81□□□□□ -1.32
CCDC144A-208ENST00000428950 ZBTB7BO15156 539 aaPredicted RBP6.8□□□□□ -1.32
CCDC144A-208ENST00000428950 ADAMTS2O95450 1211 aa6.8□□□□□ -1.32
CCDC144A-208ENST00000428950 ATP4AP20648 1035 aa6.8□□□□□ -1.32
CCDC144A-208ENST00000428950 SRSF11Q05519 484 aaKnown RBP6.8□□□□□ -1.32
CCDC144A-208ENST00000428950 ZNF385CQ66K41 422 aaPredicted RBP6.8□□□□□ -1.32
CCDC144A-208ENST00000428950 OGFOD1Q8N543 542 aa6.8□□□□□ -1.32
CCDC144A-208ENST00000428950 C1orf216Q8TAB5 229 aa6.8□□□□□ -1.32
CCDC144A-208ENST00000428950 SCHIP1Q9P0W5 487 aaPredicted RBP6.8□□□□□ -1.32
CCDC144A-208ENST00000428950 PALM3A6NDB9 673 aaPredicted RBP6.79□□□□□ -1.32
CCDC144A-208ENST00000428950 IGHA1P01876 353 aa6.79□□□□□ -1.32
CCDC144A-208ENST00000428950 EPHA4P54764 986 aa6.79□□□□□ -1.32
CCDC144A-208ENST00000428950 NBPF1Q3BBV0 1214 aa6.79□□□□□ -1.32
CCDC144A-208ENST00000428950 EFHC2Q5JST6 749 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms