RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 GNPATO15228 680 aa11.38□□□□□ -0.59
CSTF1-203ENST00000428552 HMGB2P26583 209 aaKnown RBP11.38□□□□□ -0.59
CSTF1-203ENST00000428552 ASAP1Q9ULH1 1129 aa11.38□□□□□ -0.59
CSTF1-203ENST00000428552 KDRP35968 1356 aa11.38□□□□□ -0.59
CSTF1-203ENST00000428552 ST20-MTHFSA0A0A6YYL1 179 aa11.37□□□□□ -0.59
CSTF1-203ENST00000428552 KCNA3P22001 575 aa11.37□□□□□ -0.59
CSTF1-203ENST00000428552 TGFB2P61812 414 aa11.37□□□□□ -0.59
CSTF1-203ENST00000428552 RBM46Q8TBY0 533 aaKnown RBP11.37□□□□□ -0.59
CSTF1-203ENST00000428552 KLRG1Q96E93 195 aa11.37□□□□□ -0.59
CSTF1-203ENST00000428552 SLC4A9Q96Q91 983 aa11.37□□□□□ -0.59
CSTF1-203ENST00000428552 BCS1LQ9Y276 419 aa11.37□□□□□ -0.59
CSTF1-203ENST00000428552 KIF24Q5T7B8 1368 aa11.37□□□□□ -0.59
CSTF1-203ENST00000428552 C4AP0C0L4 1744 aa11.37□□□□□ -0.59
CSTF1-203ENST00000428552 ANKRD26Q9UPS8 1709 aa11.37□□□□□ -0.59
CSTF1-203ENST00000428552 KIF20BQ96Q89 1820 aa11.37□□□□□ -0.59
CSTF1-203ENST00000428552 DPEP1P16444 411 aa11.36□□□□□ -0.59
CSTF1-203ENST00000428552 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
CSTF1-203ENST00000428552 ZNF831Q5JPB2 1677 aa11.36□□□□□ -0.59
CSTF1-203ENST00000428552 COL5A3P25940 1745 aaPredicted RBP11.35□□□□□ -0.59
CSTF1-203ENST00000428552 ARFGEF1Q9Y6D6 1849 aa11.35□□□□□ -0.59
CSTF1-203ENST00000428552 ARHGAP27Q6ZUM4 889 aa11.35□□□□□ -0.59
CSTF1-203ENST00000428552 ATG3Q9NT62 314 aa11.35□□□□□ -0.59
CSTF1-203ENST00000428552 TONSLQ96HA7 1378 aa11.35□□□□□ -0.59
CSTF1-203ENST00000428552 KCPQ6ZWJ8 1503 aa11.35□□□□□ -0.59
CSTF1-203ENST00000428552 GYS1P13807 737 aa11.34□□□□□ -0.59
CSTF1-203ENST00000428552 ATP6V1AP38606 617 aa11.34□□□□□ -0.59
CSTF1-203ENST00000428552 C9orf131Q5VYM1 1079 aa11.34□□□□□ -0.59
CSTF1-203ENST00000428552 PHKG2P15735 406 aa11.33□□□□□ -0.6
CSTF1-203ENST00000428552 ARHGEF1Q92888 912 aaKnown RBP11.33□□□□□ -0.6
CSTF1-203ENST00000428552 TMOD3Q9NYL9 352 aa11.33□□□□□ -0.6
CSTF1-203ENST00000428552 PLEKHG2Q9H7P9 1386 aa11.32□□□□□ -0.6
CSTF1-203ENST00000428552 CAPN15O75808 1086 aa11.32□□□□□ -0.6
CSTF1-203ENST00000428552 FCHSD2O94868 740 aa11.32□□□□□ -0.6
CSTF1-203ENST00000428552 TMF1P82094 1093 aa11.32□□□□□ -0.6
CSTF1-203ENST00000428552 FSTL1Q12841 308 aa11.32□□□□□ -0.6
CSTF1-203ENST00000428552 NLGN1Q8N2Q7 840 aa11.32□□□□□ -0.6
CSTF1-203ENST00000428552 DCAF5Q96JK2 942 aa11.32□□□□□ -0.6
CSTF1-203ENST00000428552 EYA1Q99502 592 aa11.32□□□□□ -0.6
CSTF1-203ENST00000428552 CARD14Q9BXL6 1004 aa11.32□□□□□ -0.6
CSTF1-203ENST00000428552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.32□□□□□ -0.6
CSTF1-203ENST00000428552 SPG7Q9UQ90 795 aa11.32□□□□□ -0.6
CSTF1-203ENST00000428552 TNRC6CQ9HCJ0 1690 aaKnown RBP11.31□□□□□ -0.6
CSTF1-203ENST00000428552 ADAMTS7Q9UKP4 1686 aa11.31□□□□□ -0.6
CSTF1-203ENST00000428552 MYH14Q7Z406 1995 aaKnown RBP11.31□□□□□ -0.6
CSTF1-203ENST00000428552 PRELPP51888 382 aa11.31□□□□□ -0.6
CSTF1-203ENST00000428552 TRAPPC3LQ5T215 181 aa11.31□□□□□ -0.6
CSTF1-203ENST00000428552 DAXXQ9UER7 740 aaPredicted RBP11.31□□□□□ -0.6
CSTF1-203ENST00000428552 SBF1O95248 1867 aa11.3□□□□□ -0.6
CSTF1-203ENST00000428552 RC3H1Q5TC82 1133 aaKnown RBP11.3□□□□□ -0.6
CSTF1-203ENST00000428552 RRAGCQ9HB90 399 aa11.3□□□□□ -0.6
CSTF1-203ENST00000428552 CCDC87Q9NVE4 849 aa11.3□□□□□ -0.6
CSTF1-203ENST00000428552 RTCBQ9Y3I0 505 aaKnown RBP11.3□□□□□ -0.6
CSTF1-203ENST00000428552 WASHC2AQ641Q2 1341 aa11.3□□□□□ -0.6
CSTF1-203ENST00000428552 CNTNAP4Q9C0A0 1308 aa11.3□□□□□ -0.6
CSTF1-203ENST00000428552 KDM6AO15550 1401 aaPredicted RBP11.29□□□□□ -0.6
CSTF1-203ENST00000428552 RPS6KA4O75676 772 aa11.29□□□□□ -0.6
CSTF1-203ENST00000428552 ADRA2BP18089 450 aa11.29□□□□□ -0.6
CSTF1-203ENST00000428552 DDR1Q08345 913 aa11.29□□□□□ -0.6
CSTF1-203ENST00000428552 IFNL2Q8IZJ0 200 aa11.29□□□□□ -0.6
CSTF1-203ENST00000428552 TNS4Q8IZW8 715 aa11.29□□□□□ -0.6
CSTF1-203ENST00000428552 RNF181Q9P0P0 153 aa11.28□□□□□ -0.6
CSTF1-203ENST00000428552 TJP1Q07157 1748 aa11.27□□□□□ -0.61
CSTF1-203ENST00000428552 CHRNA5P30532 468 aa11.27□□□□□ -0.61
CSTF1-203ENST00000428552 FKBP8Q14318 412 aa11.27□□□□□ -0.61
CSTF1-203ENST00000428552 C16orf71Q8IYS4 520 aaPredicted RBP11.27□□□□□ -0.61
CSTF1-203ENST00000428552 PIM2Q9P1W9 311 aa11.27□□□□□ -0.61
CSTF1-203ENST00000428552 SRP68Q9UHB9 627 aaKnown RBP11.27□□□□□ -0.61
CSTF1-203ENST00000428552 PARP3Q9Y6F1 533 aa11.27□□□□□ -0.61
CSTF1-203ENST00000428552 KDM2BQ8NHM5 1336 aa11.27□□□□□ -0.61
CSTF1-203ENST00000428552 RFC4P35249 363 aa11.26□□□□□ -0.61
CSTF1-203ENST00000428552 DALRD3Q5D0E6 543 aaKnown RBP11.26□□□□□ -0.61
CSTF1-203ENST00000428552 RBM42Q9BTD8 480 aaKnown RBP11.26□□□□□ -0.61
CSTF1-203ENST00000428552 POLKQ9UBT6 870 aa11.26□□□□□ -0.61
CSTF1-203ENST00000428552 USP42Q9H9J4 1324 aaKnown RBP11.26□□□□□ -0.61
CSTF1-203ENST00000428552 ERVV-2B6SEH9 535 aa11.25□□□□□ -0.61
CSTF1-203ENST00000428552 PPM1GO15355 546 aaPredicted RBP11.25□□□□□ -0.61
CSTF1-203ENST00000428552 HSPA1AP0DMV8 641 aaKnown RBP11.25□□□□□ -0.61
CSTF1-203ENST00000428552 HSPA1BP0DMV9 641 aaKnown RBP11.25□□□□□ -0.61
CSTF1-203ENST00000428552 RASSF7Q02833 373 aa11.25□□□□□ -0.61
CSTF1-203ENST00000428552 EIF4A2Q14240 407 aaKnown RBP11.25□□□□□ -0.61
CSTF1-203ENST00000428552 SMC1BQ8NDV3 1235 aa11.25□□□□□ -0.61
CSTF1-203ENST00000428552 POTECB2RU33 542 aa11.24□□□□□ -0.61
CSTF1-203ENST00000428552 POLRMTO00411 1230 aaKnown RBP11.24□□□□□ -0.61
CSTF1-203ENST00000428552 TM4SF1P30408 202 aa11.24□□□□□ -0.61
CSTF1-203ENST00000428552 CRKLP46109 303 aaKnown RBP11.24□□□□□ -0.61
CSTF1-203ENST00000428552 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
CSTF1-203ENST00000428552 TIAM2Q8IVF5 1701 aa11.23□□□□□ -0.61
CSTF1-203ENST00000428552 DLEC1Q9Y238 1755 aa11.23□□□□□ -0.61
CSTF1-203ENST00000428552 AFDNP55196 1824 aaKnown RBP11.22□□□□□ -0.61
CSTF1-203ENST00000428552 INTS5Q6P9B9 1019 aaKnown RBP11.22□□□□□ -0.61
CSTF1-203ENST00000428552 ZC3H4Q9UPT8 1303 aaKnown RBP11.22□□□□□ -0.61
CSTF1-203ENST00000428552 GLTPD2A6NH11 291 aa11.21□□□□□ -0.61
CSTF1-203ENST00000428552 PTCD1O75127 700 aaKnown RBP11.21□□□□□ -0.61
CSTF1-203ENST00000428552 NFKBIEO00221 500 aa11.2□□□□□ -0.62
CSTF1-203ENST00000428552 VEGFAP15692 232 aaPredicted RBP11.2□□□□□ -0.62
CSTF1-203ENST00000428552 HSP90AB1P08238 724 aaKnown RBP11.19□□□□□ -0.62
CSTF1-203ENST00000428552 LMNB1P20700 586 aa11.19□□□□□ -0.62
CSTF1-203ENST00000428552 CABP4P57796 275 aa11.19□□□□□ -0.62
CSTF1-203ENST00000428552 BCL2L12Q9HB09 334 aa11.19□□□□□ -0.62
CSTF1-203ENST00000428552 CARMIL3Q8ND23 1372 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms