RNA–Protein interactions for RNA: ENST00000428376.6

SFTPA1-203, Transcript of surfactant protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFTPA1, Length 2,141 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-203ENST00000428376 EIF4A1P60842 406 aaKnown RBP17.06■□□□□ 0.32
SFTPA1-203ENST00000428376 FTSJ3Q8IY81 847 aaKnown RBP17.06■□□□□ 0.32
SFTPA1-203ENST00000428376 SLC52A2Q9HAB3 445 aa17.06■□□□□ 0.32
SFTPA1-203ENST00000428376 TNNQ9UQP3 1299 aa17.06■□□□□ 0.32
SFTPA1-203ENST00000428376 COG6Q9Y2V7 657 aa17.06■□□□□ 0.32
SFTPA1-203ENST00000428376 NKX1-1Q15270 411 aaPredicted RBP17.06■□□□□ 0.32
SFTPA1-203ENST00000428376 HOXB7P09629 217 aa17.05■□□□□ 0.32
SFTPA1-203ENST00000428376 CLUAP1Q96AJ1 413 aa17.05■□□□□ 0.32
SFTPA1-203ENST00000428376 CHMP4AQ9BY43 222 aa17.05■□□□□ 0.32
SFTPA1-203ENST00000428376 TCERG1O14776 1098 aaKnown RBP17.05■□□□□ 0.32
SFTPA1-203ENST00000428376 USP35Q9P2H5 1018 aa17.05■□□□□ 0.32
SFTPA1-203ENST00000428376 MYT1Q01538 1121 aa17.04■□□□□ 0.32
SFTPA1-203ENST00000428376 MVPQ14764 893 aaKnown RBP17.04■□□□□ 0.32
SFTPA1-203ENST00000428376 SPATA31A6Q5VVP1 1343 aa17.04■□□□□ 0.32
SFTPA1-203ENST00000428376 DISP2A7MBM2 1401 aa17.03■□□□□ 0.32
SFTPA1-203ENST00000428376 CCDC30Q5VVM6 783 aa17.03■□□□□ 0.32
SFTPA1-203ENST00000428376 SLIT2O94813 1529 aa17.03■□□□□ 0.32
SFTPA1-203ENST00000428376 KDM3BQ7LBC6 1761 aa17.03■□□□□ 0.32
SFTPA1-203ENST00000428376 SCN11AQ9UI33 1791 aa17.03■□□□□ 0.32
SFTPA1-203ENST00000428376 KCNQ3O43525 872 aa17.03■□□□□ 0.32
SFTPA1-203ENST00000428376 NFATC2IPQ8NCF5 419 aa17.03■□□□□ 0.32
SFTPA1-203ENST00000428376 API5Q9BZZ5 524 aaKnown RBP17.03■□□□□ 0.32
SFTPA1-203ENST00000428376 THRAP3Q9Y2W1 955 aaKnown RBP17.03■□□□□ 0.32
SFTPA1-203ENST00000428376 CDCA7Q9BWT1 371 aaPredicted RBP17.02■□□□□ 0.32
SFTPA1-203ENST00000428376 MRC1P22897 1456 aa17.02■□□□□ 0.32
SFTPA1-203ENST00000428376 PLCH1Q4KWH8 1693 aa17.02■□□□□ 0.32
SFTPA1-203ENST00000428376 SIPA1L3O60292 1781 aaPredicted RBP17.02■□□□□ 0.32
SFTPA1-203ENST00000428376 HEG1Q9ULI3 1381 aa17.02■□□□□ 0.32
SFTPA1-203ENST00000428376 ERVV-2B6SEH9 535 aa17.02■□□□□ 0.31
SFTPA1-203ENST00000428376 SLC4A2P04920 1241 aa17.02■□□□□ 0.31
SFTPA1-203ENST00000428376 VIRMAQ69YN4 1812 aaKnown RBP17.01■□□□□ 0.31
SFTPA1-203ENST00000428376 STK31Q9BXU1 1019 aa17.01■□□□□ 0.31
SFTPA1-203ENST00000428376 PTPRCP08575 1304 aa17.01■□□□□ 0.31
SFTPA1-203ENST00000428376 SPATA31A1Q5TZJ5 1347 aa17.01■□□□□ 0.31
SFTPA1-203ENST00000428376 CABP4P57796 275 aa17■□□□□ 0.31
SFTPA1-203ENST00000428376 DDX54Q8TDD1 881 aaKnown RBP17■□□□□ 0.31
SFTPA1-203ENST00000428376 NRAPQ86VF7 1730 aa17■□□□□ 0.31
SFTPA1-203ENST00000428376 NWD2Q9ULI1 1742 aa17■□□□□ 0.31
SFTPA1-203ENST00000428376 ZNF790Q6PG37 636 aa17■□□□□ 0.31
SFTPA1-203ENST00000428376 TMEM57Q8N5G2 664 aa17■□□□□ 0.31
SFTPA1-203ENST00000428376 DDX19BQ9UMR2 479 aa17■□□□□ 0.31
SFTPA1-203ENST00000428376 HSPA1LP34931 641 aa16.99■□□□□ 0.31
SFTPA1-203ENST00000428376 ABCC4O15439 1325 aa16.99■□□□□ 0.31
SFTPA1-203ENST00000428376 SPATA31A5Q5VU36 1347 aa16.99■□□□□ 0.31
SFTPA1-203ENST00000428376 SPATA31A7Q8IWB4 1347 aa16.99■□□□□ 0.31
SFTPA1-203ENST00000428376 HDGFL1Q5TGJ6 251 aa16.99■□□□□ 0.31
SFTPA1-203ENST00000428376 UNC5CLQ8IV45 518 aa16.99■□□□□ 0.31
SFTPA1-203ENST00000428376 EXOC5O00471 708 aa16.98■□□□□ 0.31
SFTPA1-203ENST00000428376 GIGYF1O75420 1035 aaPredicted RBP16.98■□□□□ 0.31
SFTPA1-203ENST00000428376 ITPRIPQ8IWB1 547 aa16.98■□□□□ 0.31
SFTPA1-203ENST00000428376 NGLY1Q96IV0 654 aa16.98■□□□□ 0.31
SFTPA1-203ENST00000428376 FNBP4Q8N3X1 1017 aaPredicted RBP16.97■□□□□ 0.31
SFTPA1-203ENST00000428376 CHMP4BQ9H444 224 aaKnown RBP16.97■□□□□ 0.31
SFTPA1-203ENST00000428376 SHANK3Q9BYB0 1731 aa16.97■□□□□ 0.31
SFTPA1-203ENST00000428376 SLC39A6Q13433 755 aa16.96■□□□□ 0.31
SFTPA1-203ENST00000428376 BARGINQ6ZT62 677 aa16.96■□□□□ 0.31
SFTPA1-203ENST00000428376 C8orf37Q96NL8 207 aa16.96■□□□□ 0.31
SFTPA1-203ENST00000428376 G2E3Q7L622 706 aa16.95■□□□□ 0.3
SFTPA1-203ENST00000428376 TTC5Q8N0Z6 440 aa16.95■□□□□ 0.3
SFTPA1-203ENST00000428376 BCL9LQ86UU0 1499 aa16.94■□□□□ 0.3
SFTPA1-203ENST00000428376 EIF2S2P20042 333 aaKnown RBP16.94■□□□□ 0.3
SFTPA1-203ENST00000428376 VPS72Q15906 364 aa16.94■□□□□ 0.3
SFTPA1-203ENST00000428376 INTS3Q68E01 1043 aaKnown RBP16.94■□□□□ 0.3
SFTPA1-203ENST00000428376 NECTIN2Q92692 538 aa16.94■□□□□ 0.3
SFTPA1-203ENST00000428376 RGS12O14924 1447 aa16.94■□□□□ 0.3
SFTPA1-203ENST00000428376 KDM2BQ8NHM5 1336 aa16.94■□□□□ 0.3
SFTPA1-203ENST00000428376 FLIIQ13045 1269 aa16.94■□□□□ 0.3
SFTPA1-203ENST00000428376 CENPQQ7L2Z9 268 aaPredicted RBP16.94■□□□□ 0.3
SFTPA1-203ENST00000428376 ZBTB40Q9NUA8 1239 aa16.94■□□□□ 0.3
SFTPA1-203ENST00000428376 ZNF496Q96IT1 587 aaPredicted RBP16.93■□□□□ 0.3
SFTPA1-203ENST00000428376 FMNL2Q96PY5 1086 aa16.93■□□□□ 0.3
SFTPA1-203ENST00000428376 LRP6O75581 1613 aa16.93■□□□□ 0.3
SFTPA1-203ENST00000428376 TNS2Q63HR2 1409 aa16.93■□□□□ 0.3
SFTPA1-203ENST00000428376 ZBTB7BO15156 539 aaPredicted RBP16.93■□□□□ 0.3
SFTPA1-203ENST00000428376 DBF4Q9UBU7 674 aaPredicted RBP16.93■□□□□ 0.3
SFTPA1-203ENST00000428376 CCDC9Q9Y3X0 531 aaKnown RBP16.93■□□□□ 0.3
SFTPA1-203ENST00000428376 CACNA1FO60840 1977 aa16.92■□□□□ 0.3
SFTPA1-203ENST00000428376 SNRPA1P09661 255 aaKnown RBP16.92■□□□□ 0.3
SFTPA1-203ENST00000428376 DDB1Q16531 1140 aa16.91■□□□□ 0.3
SFTPA1-203ENST00000428376 CHPF2Q9P2E5 772 aa16.91■□□□□ 0.3
SFTPA1-203ENST00000428376 PCDHB15Q9Y5E8 787 aa16.91■□□□□ 0.3
SFTPA1-203ENST00000428376 WNK3Q9BYP7 1800 aa16.91■□□□□ 0.3
SFTPA1-203ENST00000428376 TMOD3Q9NYL9 352 aa16.9■□□□□ 0.3
SFTPA1-203ENST00000428376 PRAMEF22A3QJZ6 481 aa16.9■□□□□ 0.3
SFTPA1-203ENST00000428376 FKBP5Q13451 457 aaPredicted RBP16.9■□□□□ 0.3
SFTPA1-203ENST00000428376 USP21Q9UK80 565 aa16.9■□□□□ 0.3
SFTPA1-203ENST00000428376 CCT4P50991 539 aaKnown RBP16.89■□□□□ 0.29
SFTPA1-203ENST00000428376 IGHDP01880 384 aa16.88■□□□□ 0.29
SFTPA1-203ENST00000428376 MEX3CQ5U5Q3 659 aaKnown RBP16.88■□□□□ 0.29
SFTPA1-203ENST00000428376 RWDD1Q9H446 243 aaPredicted RBP16.88■□□□□ 0.29
SFTPA1-203ENST00000428376 PHAXQ9H814 394 aaKnown RBP16.88■□□□□ 0.29
SFTPA1-203ENST00000428376 DDX21Q9NR30 783 aaKnown RBP eCLIP16.88■□□□□ 0.29
SFTPA1-203ENST00000428376 HYPKQ9NX55 129 aa16.88■□□□□ 0.29
SFTPA1-203ENST00000428376 PIGBQ92521 554 aa16.87■□□□□ 0.29
SFTPA1-203ENST00000428376 F6X3S4 739 aa16.87■□□□□ 0.29
SFTPA1-203ENST00000428376 TOGARAM1Q9Y4F4 1720 aa16.86■□□□□ 0.29
SFTPA1-203ENST00000428376 PDIA6Q15084 440 aa16.86■□□□□ 0.29
SFTPA1-203ENST00000428376 USP16Q9Y5T5 823 aa16.86■□□□□ 0.29
SFTPA1-203ENST00000428376 HDAC1Q13547 482 aaPredicted RBP16.85■□□□□ 0.29
SFTPA1-203ENST00000428376 MARCH10Q8NA82 808 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms