RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 SBF1O95248 1867 aa14.5□□□□□ -0.09
RDH11-202ENST00000428130 TNRC6CQ9HCJ0 1690 aaKnown RBP14.49□□□□□ -0.09
RDH11-202ENST00000428130 GNPATO15228 680 aa14.49□□□□□ -0.09
RDH11-202ENST00000428130 MMP10P09238 476 aa14.49□□□□□ -0.09
RDH11-202ENST00000428130 ITPK1Q13572 414 aa14.49□□□□□ -0.09
RDH11-202ENST00000428130 BCS1LQ9Y276 419 aa14.49□□□□□ -0.09
RDH11-202ENST00000428130 TGFB2P61812 414 aa14.48□□□□□ -0.09
RDH11-202ENST00000428130 MYH14Q7Z406 1995 aaKnown RBP14.47□□□□□ -0.09
RDH11-202ENST00000428130 ST20-MTHFSA0A0A6YYL1 179 aa14.47□□□□□ -0.09
RDH11-202ENST00000428130 RBM46Q8TBY0 533 aaKnown RBP14.47□□□□□ -0.09
RDH11-202ENST00000428130 A0A0G2JLW4 131 aa14.46□□□□□ -0.09
RDH11-202ENST00000428130 ATP6V1AP38606 617 aa14.46□□□□□ -0.09
RDH11-202ENST00000428130 COL13A1Q5TAT6 717 aaPredicted RBP14.46□□□□□ -0.09
RDH11-202ENST00000428130 JMYQ8N9B5 988 aa14.46□□□□□ -0.09
RDH11-202ENST00000428130 KLRG1Q96E93 195 aa14.46□□□□□ -0.09
RDH11-202ENST00000428130 ASAP1Q9ULH1 1129 aa14.46□□□□□ -0.09
RDH11-202ENST00000428130 HTRA3P83110 453 aa14.45□□□□□ -0.1
RDH11-202ENST00000428130 ARHGAP27Q6ZUM4 889 aa14.45□□□□□ -0.1
RDH11-202ENST00000428130 TMOD3Q9NYL9 352 aa14.45□□□□□ -0.1
RDH11-202ENST00000428130 KDRP35968 1356 aa14.45□□□□□ -0.1
RDH11-202ENST00000428130 PLEKHG2Q9H7P9 1386 aa14.45□□□□□ -0.1
RDH11-202ENST00000428130 DPEP1P16444 411 aa14.44□□□□□ -0.1
RDH11-202ENST00000428130 SPG7Q9UQ90 795 aa14.44□□□□□ -0.1
RDH11-202ENST00000428130 KCPQ6ZWJ8 1503 aa14.44□□□□□ -0.1
RDH11-202ENST00000428130 SLC24A1O60721 1099 aa14.43□□□□□ -0.1
RDH11-202ENST00000428130 FCHSD2O94868 740 aa14.43□□□□□ -0.1
RDH11-202ENST00000428130 NLGN1Q8N2Q7 840 aa14.43□□□□□ -0.1
RDH11-202ENST00000428130 EMILIN1Q9Y6C2 1016 aa14.43□□□□□ -0.1
RDH11-202ENST00000428130 TONSLQ96HA7 1378 aa14.43□□□□□ -0.1
RDH11-202ENST00000428130 TMF1P82094 1093 aa14.42□□□□□ -0.1
RDH11-202ENST00000428130 FSTL1Q12841 308 aa14.42□□□□□ -0.1
RDH11-202ENST00000428130 TRAPPC3LQ5T215 181 aa14.42□□□□□ -0.1
RDH11-202ENST00000428130 C9orf131Q5VYM1 1079 aa14.42□□□□□ -0.1
RDH11-202ENST00000428130 C16orf71Q8IYS4 520 aaPredicted RBP14.42□□□□□ -0.1
RDH11-202ENST00000428130 ATG3Q9NT62 314 aa14.42□□□□□ -0.1
RDH11-202ENST00000428130 CCDC87Q9NVE4 849 aa14.42□□□□□ -0.1
RDH11-202ENST00000428130 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.42□□□□□ -0.1
RDH11-202ENST00000428130 RTCBQ9Y3I0 505 aaKnown RBP14.42□□□□□ -0.1
RDH11-202ENST00000428130 PHKG2P15735 406 aa14.41□□□□□ -0.1
RDH11-202ENST00000428130 KCNA3P22001 575 aa14.41□□□□□ -0.1
RDH11-202ENST00000428130 SLC4A9Q96Q91 983 aa14.41□□□□□ -0.1
RDH11-202ENST00000428130 CCDC88AQ3V6T2 1871 aa14.41□□□□□ -0.1
RDH11-202ENST00000428130 CAPN15O75808 1086 aa14.4□□□□□ -0.1
RDH11-202ENST00000428130 GYS1P13807 737 aa14.4□□□□□ -0.1
RDH11-202ENST00000428130 MAPK8IP2Q13387 824 aaPredicted RBP14.4□□□□□ -0.1
RDH11-202ENST00000428130 IFNL2Q8IZJ0 200 aa14.4□□□□□ -0.1
RDH11-202ENST00000428130 ARHGEF1Q92888 912 aaKnown RBP14.4□□□□□ -0.1
RDH11-202ENST00000428130 TJP1Q07157 1748 aa14.39□□□□□ -0.11
RDH11-202ENST00000428130 EYA1Q99502 592 aa14.39□□□□□ -0.11
RDH11-202ENST00000428130 PARP3Q9Y6F1 533 aa14.39□□□□□ -0.11
RDH11-202ENST00000428130 DLEC1Q9Y238 1755 aa14.39□□□□□ -0.11
RDH11-202ENST00000428130 ADAMTS7Q9UKP4 1686 aa14.39□□□□□ -0.11
RDH11-202ENST00000428130 KDM2BQ8NHM5 1336 aa14.39□□□□□ -0.11
RDH11-202ENST00000428130 CNTNAP4Q9C0A0 1308 aa14.39□□□□□ -0.11
RDH11-202ENST00000428130 TIAM2Q8IVF5 1701 aa14.38□□□□□ -0.11
RDH11-202ENST00000428130 RC3H1Q5TC82 1133 aaKnown RBP14.38□□□□□ -0.11
RDH11-202ENST00000428130 TNS4Q8IZW8 715 aa14.38□□□□□ -0.11
RDH11-202ENST00000428130 DCAF5Q96JK2 942 aa14.38□□□□□ -0.11
RDH11-202ENST00000428130 AFDNP55196 1824 aaKnown RBP14.38□□□□□ -0.11
RDH11-202ENST00000428130 WASHC2AQ641Q2 1341 aa14.38□□□□□ -0.11
RDH11-202ENST00000428130 PRELPP51888 382 aa14.37□□□□□ -0.11
RDH11-202ENST00000428130 RRAGCQ9HB90 399 aa14.37□□□□□ -0.11
RDH11-202ENST00000428130 PIM2Q9P1W9 311 aa14.37□□□□□ -0.11
RDH11-202ENST00000428130 PPM1GO15355 546 aaPredicted RBP14.36□□□□□ -0.11
RDH11-202ENST00000428130 RPS6KA4O75676 772 aa14.36□□□□□ -0.11
RDH11-202ENST00000428130 RFC4P35249 363 aa14.36□□□□□ -0.11
RDH11-202ENST00000428130 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
RDH11-202ENST00000428130 CARD14Q9BXL6 1004 aa14.36□□□□□ -0.11
RDH11-202ENST00000428130 RNF181Q9P0P0 153 aa14.36□□□□□ -0.11
RDH11-202ENST00000428130 DALRD3Q5D0E6 543 aaKnown RBP14.35□□□□□ -0.11
RDH11-202ENST00000428130 VIRMAQ69YN4 1812 aaKnown RBP14.34□□□□□ -0.11
RDH11-202ENST00000428130 ERVV-2B6SEH9 535 aa14.34□□□□□ -0.11
RDH11-202ENST00000428130 SMC1BQ8NDV3 1235 aa14.34□□□□□ -0.11
RDH11-202ENST00000428130 NRXN2Q9P2S2 1712 aa14.34□□□□□ -0.11
RDH11-202ENST00000428130 KDM6AO15550 1401 aaPredicted RBP14.33□□□□□ -0.11
RDH11-202ENST00000428130 SCN11AQ9UI33 1791 aa14.33□□□□□ -0.12
RDH11-202ENST00000428130 DDR1Q08345 913 aa14.33□□□□□ -0.12
RDH11-202ENST00000428130 CHRNA5P30532 468 aa14.32□□□□□ -0.12
RDH11-202ENST00000428130 DICER1Q9UPY3 1922 aaKnown RBP14.32□□□□□ -0.12
RDH11-202ENST00000428130 FKBP8Q14318 412 aa14.31□□□□□ -0.12
RDH11-202ENST00000428130 POLKQ9UBT6 870 aa14.31□□□□□ -0.12
RDH11-202ENST00000428130 SRP68Q9UHB9 627 aaKnown RBP14.31□□□□□ -0.12
RDH11-202ENST00000428130 USP42Q9H9J4 1324 aaKnown RBP14.31□□□□□ -0.12
RDH11-202ENST00000428130 ZC3H4Q9UPT8 1303 aaKnown RBP14.31□□□□□ -0.12
RDH11-202ENST00000428130 HSPA1AP0DMV8 641 aaKnown RBP14.3□□□□□ -0.12
RDH11-202ENST00000428130 HSPA1BP0DMV9 641 aaKnown RBP14.3□□□□□ -0.12
RDH11-202ENST00000428130 EIF4A2Q14240 407 aaKnown RBP14.3□□□□□ -0.12
RDH11-202ENST00000428130 CDCA8Q53HL2 280 aa14.3□□□□□ -0.12
RDH11-202ENST00000428130 HSP90AB1P08238 724 aaKnown RBP14.29□□□□□ -0.12
RDH11-202ENST00000428130 CRKLP46109 303 aaKnown RBP14.29□□□□□ -0.12
RDH11-202ENST00000428130 RASSF7Q02833 373 aa14.29□□□□□ -0.12
RDH11-202ENST00000428130 POLRMTO00411 1230 aaKnown RBP14.28□□□□□ -0.12
RDH11-202ENST00000428130 GLTPD2A6NH11 291 aa14.27□□□□□ -0.13
RDH11-202ENST00000428130 PTCD1O75127 700 aaKnown RBP14.27□□□□□ -0.13
RDH11-202ENST00000428130 TM4SF1P30408 202 aa14.27□□□□□ -0.13
RDH11-202ENST00000428130 CABP4P57796 275 aa14.27□□□□□ -0.13
RDH11-202ENST00000428130 FER1L6Q2WGJ9 1857 aa14.27□□□□□ -0.13
RDH11-202ENST00000428130 VEGFAP15692 232 aaPredicted RBP14.26□□□□□ -0.13
RDH11-202ENST00000428130 LMNB1P20700 586 aa14.26□□□□□ -0.13
RDH11-202ENST00000428130 ANKRD31Q8N7Z5 1873 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms