RNA–Protein interactions for RNA: ENST00000427371.3

UBE2E2-204, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 3

Gene UBE2E2, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-204ENST00000427371 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
UBE2E2-204ENST00000427371 POLKQ9UBT6 870 aa16.68■□□□□ 0.26
UBE2E2-204ENST00000427371 SBF1O95248 1867 aa16.67■□□□□ 0.26
UBE2E2-204ENST00000427371 SENP3-EIF4A1A0A087X0R7 540 aa16.66■□□□□ 0.26
UBE2E2-204ENST00000427371 HMGB2P26583 209 aaKnown RBP16.66■□□□□ 0.26
UBE2E2-204ENST00000427371 SSFA2P28290 1259 aa16.66■□□□□ 0.26
UBE2E2-204ENST00000427371 ITPK1Q13572 414 aa16.66■□□□□ 0.26
UBE2E2-204ENST00000427371 SMIM5Q71RC9 77 aa16.66■□□□□ 0.26
UBE2E2-204ENST00000427371 KDM6AO15550 1401 aaPredicted RBP16.65■□□□□ 0.26
UBE2E2-204ENST00000427371 LOC102724428A0A0B4J2F2 783 aa16.65■□□□□ 0.26
UBE2E2-204ENST00000427371 GIGYF1O75420 1035 aaPredicted RBP16.65■□□□□ 0.26
UBE2E2-204ENST00000427371 PHKG2P15735 406 aa16.65■□□□□ 0.26
UBE2E2-204ENST00000427371 SIK1P57059 783 aa16.65■□□□□ 0.26
UBE2E2-204ENST00000427371 IGSF1Q8N6C5 1336 aa16.65■□□□□ 0.26
UBE2E2-204ENST00000427371 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.64■□□□□ 0.25
UBE2E2-204ENST00000427371 SLC4A9Q96Q91 983 aa16.64■□□□□ 0.25
UBE2E2-204ENST00000427371 TIMELESSQ9UNS1 1208 aa16.64■□□□□ 0.25
UBE2E2-204ENST00000427371 PXDNLA1KZ92 1463 aa16.64■□□□□ 0.25
UBE2E2-204ENST00000427371 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
UBE2E2-204ENST00000427371 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
UBE2E2-204ENST00000427371 ASAP1Q9ULH1 1129 aa16.63■□□□□ 0.25
UBE2E2-204ENST00000427371 SPG7Q9UQ90 795 aa16.63■□□□□ 0.25
UBE2E2-204ENST00000427371 DLEC1Q9Y238 1755 aa16.63■□□□□ 0.25
UBE2E2-204ENST00000427371 C10orf71Q711Q0 1435 aa16.62■□□□□ 0.25
UBE2E2-204ENST00000427371 UBR2Q8IWV8 1755 aa16.62■□□□□ 0.25
UBE2E2-204ENST00000427371 EIF4A2Q14240 407 aaKnown RBP16.62■□□□□ 0.25
UBE2E2-204ENST00000427371 ATG3Q9NT62 314 aa16.62■□□□□ 0.25
UBE2E2-204ENST00000427371 AK7Q96M32 723 aa16.61■□□□□ 0.25
UBE2E2-204ENST00000427371 NRXN2Q9P2S2 1712 aa16.61■□□□□ 0.25
UBE2E2-204ENST00000427371 TRIM26Q12899 539 aaPredicted RBP16.6■□□□□ 0.25
UBE2E2-204ENST00000427371 IFNL2Q8IZJ0 200 aa16.6■□□□□ 0.25
UBE2E2-204ENST00000427371 CLSPNQ9HAW4 1339 aa16.6■□□□□ 0.25
UBE2E2-204ENST00000427371 TMOD3Q9NYL9 352 aa16.59■□□□□ 0.25
UBE2E2-204ENST00000427371 SIPA1L3O60292 1781 aaPredicted RBP16.58■□□□□ 0.24
UBE2E2-204ENST00000427371 CCDC88AQ3V6T2 1871 aa16.58■□□□□ 0.24
UBE2E2-204ENST00000427371 MRC1P22897 1456 aa16.57■□□□□ 0.24
UBE2E2-204ENST00000427371 PHF14O94880 888 aa16.57■□□□□ 0.24
UBE2E2-204ENST00000427371 CNTNAP4Q9C0A0 1308 aa16.56■□□□□ 0.24
UBE2E2-204ENST00000427371 ERVV-2B6SEH9 535 aa16.55■□□□□ 0.24
UBE2E2-204ENST00000427371 GNPATO15228 680 aa16.55■□□□□ 0.24
UBE2E2-204ENST00000427371 PPM1GO15355 546 aaPredicted RBP16.55■□□□□ 0.24
UBE2E2-204ENST00000427371 ATP6V1AP38606 617 aa16.55■□□□□ 0.24
UBE2E2-204ENST00000427371 RC3H1Q5TC82 1133 aaKnown RBP16.55■□□□□ 0.24
UBE2E2-204ENST00000427371 WDR90Q96KV7 1748 aa16.54■□□□□ 0.24
UBE2E2-204ENST00000427371 PCNTO95613 3336 aa16.53■□□□□ 0.24
UBE2E2-204ENST00000427371 KIF3CO14782 793 aa16.53■□□□□ 0.24
UBE2E2-204ENST00000427371 MMP10P09238 476 aa16.52■□□□□ 0.24
UBE2E2-204ENST00000427371 DCAF5Q96JK2 942 aa16.52■□□□□ 0.24
UBE2E2-204ENST00000427371 TNRC6CQ9HCJ0 1690 aaKnown RBP16.52■□□□□ 0.23
UBE2E2-204ENST00000427371 ANKRD31Q8N7Z5 1873 aa16.52■□□□□ 0.23
UBE2E2-204ENST00000427371 KCPQ6ZWJ8 1503 aa16.51■□□□□ 0.23
UBE2E2-204ENST00000427371 GYS1P13807 737 aa16.51■□□□□ 0.23
UBE2E2-204ENST00000427371 GPBP1L1Q9HC44 474 aaPredicted RBP16.51■□□□□ 0.23
UBE2E2-204ENST00000427371 DICER1Q9UPY3 1922 aaKnown RBP16.51■□□□□ 0.23
UBE2E2-204ENST00000427371 RPS6KA4O75676 772 aa16.5■□□□□ 0.23
UBE2E2-204ENST00000427371 AEBP1Q8IUX7 1158 aa16.5■□□□□ 0.23
UBE2E2-204ENST00000427371 ARHGEF1Q92888 912 aaKnown RBP16.5■□□□□ 0.23
UBE2E2-204ENST00000427371 CAPN15O75808 1086 aa16.49■□□□□ 0.23
UBE2E2-204ENST00000427371 HSPA6P17066 643 aa16.49■□□□□ 0.23
UBE2E2-204ENST00000427371 KCNA3P22001 575 aa16.49■□□□□ 0.23
UBE2E2-204ENST00000427371 DSG3P32926 999 aa16.49■□□□□ 0.23
UBE2E2-204ENST00000427371 TGFB2P61812 414 aa16.49■□□□□ 0.23
UBE2E2-204ENST00000427371 HSP90AB1P08238 724 aaKnown RBP16.48■□□□□ 0.23
UBE2E2-204ENST00000427371 HSPA5P11021 654 aaKnown RBP16.48■□□□□ 0.23
UBE2E2-204ENST00000427371 NLGN1Q8N2Q7 840 aa16.48■□□□□ 0.23
UBE2E2-204ENST00000427371 PANK3Q9H999 370 aa16.48■□□□□ 0.23
UBE2E2-204ENST00000427371 RTCBQ9Y3I0 505 aaKnown RBP16.48■□□□□ 0.23
UBE2E2-204ENST00000427371 SCN7AQ01118 1682 aa16.47■□□□□ 0.23
UBE2E2-204ENST00000427371 TNNT2P45379 298 aaPredicted RBP16.47■□□□□ 0.23
UBE2E2-204ENST00000427371 AMOTQ4VCS5 1084 aa16.47■□□□□ 0.23
UBE2E2-204ENST00000427371 TRAPPC3LQ5T215 181 aa16.47■□□□□ 0.23
UBE2E2-204ENST00000427371 WWC3Q9ULE0 1092 aa16.47■□□□□ 0.23
UBE2E2-204ENST00000427371 TIAM2Q8IVF5 1701 aa16.47■□□□□ 0.23
UBE2E2-204ENST00000427371 IL13P35225 146 aa16.46■□□□□ 0.23
UBE2E2-204ENST00000427371 PLEKHO1Q53GL0 409 aaPredicted RBP16.46■□□□□ 0.23
UBE2E2-204ENST00000427371 ZNF530Q6P9A1 599 aaPredicted RBP16.46■□□□□ 0.23
UBE2E2-204ENST00000427371 ARFGEF2Q9Y6D5 1785 aa16.46■□□□□ 0.22
UBE2E2-204ENST00000427371 FER1L6Q2WGJ9 1857 aa16.46■□□□□ 0.22
UBE2E2-204ENST00000427371 COL11A2P13942 1736 aaPredicted RBP16.45■□□□□ 0.22
UBE2E2-204ENST00000427371 COL3A1P02461 1466 aaPredicted RBP16.45■□□□□ 0.22
UBE2E2-204ENST00000427371 USP42Q9H9J4 1324 aaKnown RBP16.45■□□□□ 0.22
UBE2E2-204ENST00000427371 BCORQ6W2J9 1755 aa16.44■□□□□ 0.22
UBE2E2-204ENST00000427371 DPEP1P16444 411 aa16.44■□□□□ 0.22
UBE2E2-204ENST00000427371 EIF4G2P78344 907 aaKnown RBP eCLIP16.44■□□□□ 0.22
UBE2E2-204ENST00000427371 DDR1Q08345 913 aa16.44■□□□□ 0.22
UBE2E2-204ENST00000427371 IFFO2Q5TF58 517 aa16.44■□□□□ 0.22
UBE2E2-204ENST00000427371 A0A0G2JLW4 131 aa16.43■□□□□ 0.22
UBE2E2-204ENST00000427371 CRKLP46109 303 aaKnown RBP16.43■□□□□ 0.22
UBE2E2-204ENST00000427371 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
UBE2E2-204ENST00000427371 INTS5Q6P9B9 1019 aaKnown RBP16.43■□□□□ 0.22
UBE2E2-204ENST00000427371 ZNF526Q8TF50 670 aaPredicted RBP16.43■□□□□ 0.22
UBE2E2-204ENST00000427371 RBM42Q9BTD8 480 aaKnown RBP16.43■□□□□ 0.22
UBE2E2-204ENST00000427371 CACNA1SQ13698 1873 aa16.43■□□□□ 0.22
UBE2E2-204ENST00000427371 TM4SF1P30408 202 aa16.41■□□□□ 0.22
UBE2E2-204ENST00000427371 CABP4P57796 275 aa16.41■□□□□ 0.22
UBE2E2-204ENST00000427371 FKBP8Q14318 412 aa16.41■□□□□ 0.22
UBE2E2-204ENST00000427371 NFATC2IPQ8NCF5 419 aa16.41■□□□□ 0.22
UBE2E2-204ENST00000427371 SPINK5Q9NQ38 1064 aaPredicted RBP16.41■□□□□ 0.22
UBE2E2-204ENST00000427371 CCDC87Q9NVE4 849 aa16.41■□□□□ 0.22
UBE2E2-204ENST00000427371 SRP68Q9UHB9 627 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms