RNA–Protein interactions for RNA: ENST00000426713.1

LINC00116-202, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LINC00116, Length 461 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-202ENST00000426713 TRAPPC3LQ5T215 181 aa20.87■□□□□ 0.93
LINC00116-202ENST00000426713 RTCBQ9Y3I0 505 aaKnown RBP20.87■□□□□ 0.93
LINC00116-202ENST00000426713 TGFB2P61812 414 aa20.86■□□□□ 0.93
LINC00116-202ENST00000426713 IFNL2Q8IZJ0 200 aa20.86■□□□□ 0.93
LINC00116-202ENST00000426713 FCHSD2O94868 740 aa20.85■□□□□ 0.93
LINC00116-202ENST00000426713 NLGN1Q8N2Q7 840 aa20.85■□□□□ 0.93
LINC00116-202ENST00000426713 RBM42Q9BTD8 480 aaKnown RBP20.85■□□□□ 0.93
LINC00116-202ENST00000426713 NMRK2Q9NPI5 230 aa20.85■□□□□ 0.93
LINC00116-202ENST00000426713 ATG3Q9NT62 314 aa20.85■□□□□ 0.93
LINC00116-202ENST00000426713 PHKG2P15735 406 aa20.84■□□□□ 0.93
LINC00116-202ENST00000426713 C16orf71Q8IYS4 520 aaPredicted RBP20.84■□□□□ 0.93
LINC00116-202ENST00000426713 EYA1Q99502 592 aa20.84■□□□□ 0.93
LINC00116-202ENST00000426713 CCDC87Q9NVE4 849 aa20.84■□□□□ 0.93
LINC00116-202ENST00000426713 KIF13BQ9NQT8 1826 aa20.83■□□□□ 0.93
LINC00116-202ENST00000426713 DPEP1P16444 411 aa20.83■□□□□ 0.93
LINC00116-202ENST00000426713 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.83■□□□□ 0.93
LINC00116-202ENST00000426713 RFC4P35249 363 aa20.82■□□□□ 0.92
LINC00116-202ENST00000426713 CARD14Q9BXL6 1004 aa20.82■□□□□ 0.92
LINC00116-202ENST00000426713 PARP3Q9Y6F1 533 aa20.82■□□□□ 0.92
LINC00116-202ENST00000426713 KIAA1551Q9HCM1 1747 aa20.81■□□□□ 0.92
LINC00116-202ENST00000426713 WASHC2AQ641Q2 1341 aa20.81■□□□□ 0.92
LINC00116-202ENST00000426713 NCAPD2Q15021 1401 aa20.8■□□□□ 0.92
LINC00116-202ENST00000426713 DNAJC5GQ8N7S2 189 aa20.8■□□□□ 0.92
LINC00116-202ENST00000426713 ARHGEF1Q92888 912 aaKnown RBP20.8■□□□□ 0.92
LINC00116-202ENST00000426713 C10orf71Q711Q0 1435 aa20.79■□□□□ 0.92
LINC00116-202ENST00000426713 C4AP0C0L4 1744 aa20.78■□□□□ 0.92
LINC00116-202ENST00000426713 TNNT2P45379 298 aaPredicted RBP20.78■□□□□ 0.92
LINC00116-202ENST00000426713 C9orf131Q5VYM1 1079 aa20.78■□□□□ 0.92
LINC00116-202ENST00000426713 WDR90Q96KV7 1748 aa20.78■□□□□ 0.92
LINC00116-202ENST00000426713 ANKRD26Q9UPS8 1709 aa20.78■□□□□ 0.92
LINC00116-202ENST00000426713 GYS1P13807 737 aa20.77■□□□□ 0.92
LINC00116-202ENST00000426713 ADRA2BP18089 450 aa20.77■□□□□ 0.92
LINC00116-202ENST00000426713 HTRA3P83110 453 aa20.77■□□□□ 0.92
LINC00116-202ENST00000426713 KDRP35968 1356 aa20.76■□□□□ 0.91
LINC00116-202ENST00000426713 RBM46Q8TBY0 533 aaKnown RBP20.76■□□□□ 0.91
LINC00116-202ENST00000426713 SLC4A9Q96Q91 983 aa20.76■□□□□ 0.91
LINC00116-202ENST00000426713 RPS6KA4O75676 772 aa20.75■□□□□ 0.91
LINC00116-202ENST00000426713 POLR3GLQ9BT43 218 aa20.75■□□□□ 0.91
LINC00116-202ENST00000426713 POLKQ9UBT6 870 aa20.75■□□□□ 0.91
LINC00116-202ENST00000426713 BRCA1P38398 1863 aaKnown RBP20.75■□□□□ 0.91
LINC00116-202ENST00000426713 ERVV-2B6SEH9 535 aa20.74■□□□□ 0.91
LINC00116-202ENST00000426713 CABP4P57796 275 aa20.74■□□□□ 0.91
LINC00116-202ENST00000426713 EIF4A2Q14240 407 aaKnown RBP20.74■□□□□ 0.91
LINC00116-202ENST00000426713 RC3H1Q5TC82 1133 aaKnown RBP20.74■□□□□ 0.91
LINC00116-202ENST00000426713 PIM2Q9P1W9 311 aa20.74■□□□□ 0.91
LINC00116-202ENST00000426713 KDM2BQ8NHM5 1336 aa20.74■□□□□ 0.91
LINC00116-202ENST00000426713 CNTNAP4Q9C0A0 1308 aa20.74■□□□□ 0.91
LINC00116-202ENST00000426713 PLEKHG2Q9H7P9 1386 aa20.73■□□□□ 0.91
LINC00116-202ENST00000426713 COL5A3P25940 1745 aaPredicted RBP20.73■□□□□ 0.91
LINC00116-202ENST00000426713 HSP90AB1P08238 724 aaKnown RBP20.73■□□□□ 0.91
LINC00116-202ENST00000426713 DALRD3Q5D0E6 543 aaKnown RBP20.73■□□□□ 0.91
LINC00116-202ENST00000426713 DCAF5Q96JK2 942 aa20.73■□□□□ 0.91
LINC00116-202ENST00000426713 RNF181Q9P0P0 153 aa20.73■□□□□ 0.91
LINC00116-202ENST00000426713 ARFGEF1Q9Y6D6 1849 aa20.73■□□□□ 0.91
LINC00116-202ENST00000426713 PTCD1O75127 700 aaKnown RBP20.72■□□□□ 0.91
LINC00116-202ENST00000426713 CAPN15O75808 1086 aa20.72■□□□□ 0.91
LINC00116-202ENST00000426713 KLRG1Q96E93 195 aa20.72■□□□□ 0.91
LINC00116-202ENST00000426713 KCPQ6ZWJ8 1503 aa20.72■□□□□ 0.91
LINC00116-202ENST00000426713 KCNA3P22001 575 aa20.71■□□□□ 0.91
LINC00116-202ENST00000426713 PLEKHO1Q53GL0 409 aaPredicted RBP20.71■□□□□ 0.91
LINC00116-202ENST00000426713 ZNF530Q6P9A1 599 aaPredicted RBP20.71■□□□□ 0.91
LINC00116-202ENST00000426713 RRAGCQ9HB90 399 aa20.71■□□□□ 0.91
LINC00116-202ENST00000426713 MYH14Q7Z406 1995 aaKnown RBP20.7■□□□□ 0.9
LINC00116-202ENST00000426713 FSTL1Q12841 308 aa20.7■□□□□ 0.9
LINC00116-202ENST00000426713 SRP68Q9UHB9 627 aaKnown RBP20.7■□□□□ 0.9
LINC00116-202ENST00000426713 ZNF831Q5JPB2 1677 aa20.7■□□□□ 0.9
LINC00116-202ENST00000426713 COL13A1Q5TAT6 717 aaPredicted RBP20.69■□□□□ 0.9
LINC00116-202ENST00000426713 CHRNA5P30532 468 aa20.68■□□□□ 0.9
LINC00116-202ENST00000426713 CRKLP46109 303 aaKnown RBP20.67■□□□□ 0.9
LINC00116-202ENST00000426713 MTHFSP49914 203 aa20.67■□□□□ 0.9
LINC00116-202ENST00000426713 FKBP8Q14318 412 aa20.67■□□□□ 0.9
LINC00116-202ENST00000426713 C1orf141Q5JVX7 400 aa20.67■□□□□ 0.9
LINC00116-202ENST00000426713 KDM6AO15550 1401 aaPredicted RBP20.65■□□□□ 0.9
LINC00116-202ENST00000426713 USP42Q9H9J4 1324 aaKnown RBP20.65■□□□□ 0.9
LINC00116-202ENST00000426713 DDR1Q08345 913 aa20.65■□□□□ 0.9
LINC00116-202ENST00000426713 TNRC6CQ9HCJ0 1690 aaKnown RBP20.64■□□□□ 0.9
LINC00116-202ENST00000426713 AMOTQ4VCS5 1084 aa20.64■□□□□ 0.89
LINC00116-202ENST00000426713 TNS4Q8IZW8 715 aa20.64■□□□□ 0.89
LINC00116-202ENST00000426713 JMYQ8N9B5 988 aa20.64■□□□□ 0.89
LINC00116-202ENST00000426713 NFATC2IPQ8NCF5 419 aa20.64■□□□□ 0.89
LINC00116-202ENST00000426713 SMC1BQ8NDV3 1235 aa20.64■□□□□ 0.89
LINC00116-202ENST00000426713 SBF1O95248 1867 aa20.63■□□□□ 0.89
LINC00116-202ENST00000426713 ZPR1O75312 459 aa20.63■□□□□ 0.89
LINC00116-202ENST00000426713 RASSF7Q02833 373 aa20.61■□□□□ 0.89
LINC00116-202ENST00000426713 AEBP1Q8IUX7 1158 aa20.6■□□□□ 0.89
LINC00116-202ENST00000426713 POLRMTO00411 1230 aaKnown RBP20.59■□□□□ 0.89
LINC00116-202ENST00000426713 USPL1Q5W0Q7 1092 aa20.59■□□□□ 0.89
LINC00116-202ENST00000426713 TJP1Q07157 1748 aa20.58■□□□□ 0.89
LINC00116-202ENST00000426713 INTS5Q6P9B9 1019 aaKnown RBP20.57■□□□□ 0.88
LINC00116-202ENST00000426713 VEGFAP15692 232 aaPredicted RBP20.56■□□□□ 0.88
LINC00116-202ENST00000426713 TM4SF1P30408 202 aa20.56■□□□□ 0.88
LINC00116-202ENST00000426713 SULT6B1Q6IMI4 303 aa20.56■□□□□ 0.88
LINC00116-202ENST00000426713 DNAJC10Q8IXB1 793 aa20.56■□□□□ 0.88
LINC00116-202ENST00000426713 LMNB1P20700 586 aa20.55■□□□□ 0.88
LINC00116-202ENST00000426713 CCDC88AQ3V6T2 1871 aa20.54■□□□□ 0.88
LINC00116-202ENST00000426713 ZC3H4Q9UPT8 1303 aaKnown RBP20.53■□□□□ 0.88
LINC00116-202ENST00000426713 AFDNP55196 1824 aaKnown RBP20.53■□□□□ 0.88
LINC00116-202ENST00000426713 GLTPD2A6NH11 291 aa20.53■□□□□ 0.88
LINC00116-202ENST00000426713 HSPA1AP0DMV8 641 aaKnown RBP20.53■□□□□ 0.88
LINC00116-202ENST00000426713 HSPA1BP0DMV9 641 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms