RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 MTHFSP49914 203 aa22.76■■□□□ 1.23
CCDC78-203ENST00000423653 CC2D1BQ5T0F9 858 aaKnown RBP22.76■■□□□ 1.23
CCDC78-203ENST00000423653 ATP6V1AP38606 617 aa22.75■■□□□ 1.23
CCDC78-203ENST00000423653 MSL1Q68DK7 614 aa22.75■■□□□ 1.23
CCDC78-203ENST00000423653 LINC00116Q8NCU8 138 aa22.75■■□□□ 1.23
CCDC78-203ENST00000423653 ATG3Q9NT62 314 aa22.75■■□□□ 1.23
CCDC78-203ENST00000423653 PHF14O94880 888 aa22.74■■□□□ 1.23
CCDC78-203ENST00000423653 CABP4P57796 275 aa22.74■■□□□ 1.23
CCDC78-203ENST00000423653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.73■■□□□ 1.23
CCDC78-203ENST00000423653 CHD4Q14839 1912 aa22.72■■□□□ 1.23
CCDC78-203ENST00000423653 COL5A3P25940 1745 aaPredicted RBP22.72■■□□□ 1.23
CCDC78-203ENST00000423653 SCN11AQ9UI33 1791 aa22.72■■□□□ 1.23
CCDC78-203ENST00000423653 GNPATO15228 680 aa22.72■■□□□ 1.23
CCDC78-203ENST00000423653 GPR162Q16538 588 aa22.72■■□□□ 1.23
CCDC78-203ENST00000423653 ITPK1Q13572 414 aa22.71■■□□□ 1.23
CCDC78-203ENST00000423653 DIAPH1O60610 1272 aaKnown RBP22.7■■□□□ 1.22
CCDC78-203ENST00000423653 RBM42Q9BTD8 480 aaKnown RBP22.7■■□□□ 1.22
CCDC78-203ENST00000423653 AKAP4Q5JQC9 854 aa22.69■■□□□ 1.22
CCDC78-203ENST00000423653 AMIGO3Q86WK7 504 aa22.69■■□□□ 1.22
CCDC78-203ENST00000423653 CICQ96RK0 1608 aaPredicted RBP22.68■■□□□ 1.22
CCDC78-203ENST00000423653 NLGN2Q8NFZ4 835 aa22.68■■□□□ 1.22
CCDC78-203ENST00000423653 COL3A1P02461 1466 aaPredicted RBP22.67■■□□□ 1.22
CCDC78-203ENST00000423653 MRC1P22897 1456 aa22.67■■□□□ 1.22
CCDC78-203ENST00000423653 PELP1Q8IZL8 1130 aaKnown RBP22.67■■□□□ 1.22
CCDC78-203ENST00000423653 CNTNAP4Q9C0A0 1308 aa22.66■■□□□ 1.22
CCDC78-203ENST00000423653 HMOX1P09601 288 aa22.66■■□□□ 1.22
CCDC78-203ENST00000423653 RTCBQ9Y3I0 505 aaKnown RBP22.66■■□□□ 1.22
CCDC78-203ENST00000423653 CD2APQ9Y5K6 639 aa22.66■■□□□ 1.22
CCDC78-203ENST00000423653 ADRA2BP18089 450 aa22.65■■□□□ 1.22
CCDC78-203ENST00000423653 UTRNP46939 3433 aa22.64■■□□□ 1.22
CCDC78-203ENST00000423653 VIRMAQ69YN4 1812 aaKnown RBP22.64■■□□□ 1.22
CCDC78-203ENST00000423653 RC3H1Q5TC82 1133 aaKnown RBP22.64■■□□□ 1.21
CCDC78-203ENST00000423653 NFATC2IPQ8NCF5 419 aa22.64■■□□□ 1.21
CCDC78-203ENST00000423653 ADAMTS7Q9UKP4 1686 aa22.63■■□□□ 1.21
CCDC78-203ENST00000423653 CNGB1Q14028 1251 aaPredicted RBP22.63■■□□□ 1.21
CCDC78-203ENST00000423653 SLC4A9Q96Q91 983 aa22.63■■□□□ 1.21
CCDC78-203ENST00000423653 TJP1Q07157 1748 aa22.62■■□□□ 1.21
CCDC78-203ENST00000423653 PTCD1O75127 700 aaKnown RBP22.62■■□□□ 1.21
CCDC78-203ENST00000423653 SMIM5Q71RC9 77 aa22.62■■□□□ 1.21
CCDC78-203ENST00000423653 C4AP0C0L4 1744 aa22.61■■□□□ 1.21
CCDC78-203ENST00000423653 TRAPPC3LQ5T215 181 aa22.61■■□□□ 1.21
CCDC78-203ENST00000423653 SLC52A2Q9HAB3 445 aa22.61■■□□□ 1.21
CCDC78-203ENST00000423653 GRIN3BO60391 1043 aa22.6■■□□□ 1.21
CCDC78-203ENST00000423653 CFAP53Q96M91 514 aa22.6■■□□□ 1.21
CCDC78-203ENST00000423653 U2SURPO15042 1029 aaKnown RBP22.59■■□□□ 1.21
CCDC78-203ENST00000423653 RNMTO43148 476 aaKnown RBP22.58■■□□□ 1.21
CCDC78-203ENST00000423653 RPS6KA4O75676 772 aa22.58■■□□□ 1.21
CCDC78-203ENST00000423653 MTHFSDQ2M296 383 aaKnown RBP22.58■■□□□ 1.21
CCDC78-203ENST00000423653 ZNF784Q8NCA9 323 aaPredicted RBP22.58■■□□□ 1.21
CCDC78-203ENST00000423653 GOLGB1Q14789 3259 aaKnown RBP22.57■■□□□ 1.2
CCDC78-203ENST00000423653 RFC4P35249 363 aa22.57■■□□□ 1.2
CCDC78-203ENST00000423653 CRKLP46109 303 aaKnown RBP22.57■■□□□ 1.2
CCDC78-203ENST00000423653 MYH14Q7Z406 1995 aaKnown RBP22.57■■□□□ 1.2
CCDC78-203ENST00000423653 MMP10P09238 476 aa22.56■■□□□ 1.2
CCDC78-203ENST00000423653 YBX3P16989 372 aaKnown RBP eCLIP22.56■■□□□ 1.2
CCDC78-203ENST00000423653 NLGN1Q8N2Q7 840 aa22.56■■□□□ 1.2
CCDC78-203ENST00000423653 GAS2L2Q8NHY3 880 aa22.55■■□□□ 1.2
CCDC78-203ENST00000423653 ARHGEF1Q92888 912 aaKnown RBP22.55■■□□□ 1.2
CCDC78-203ENST00000423653 LGR6Q9HBX8 967 aa22.55■■□□□ 1.2
CCDC78-203ENST00000423653 KCPQ6ZWJ8 1503 aa22.54■■□□□ 1.2
CCDC78-203ENST00000423653 KIF13BQ9NQT8 1826 aa22.54■■□□□ 1.2
CCDC78-203ENST00000423653 UBR2Q8IWV8 1755 aa22.53■■□□□ 1.2
CCDC78-203ENST00000423653 NUDCQ9Y266 331 aa22.52■■□□□ 1.2
CCDC78-203ENST00000423653 C10orf71Q711Q0 1435 aa22.51■■□□□ 1.19
CCDC78-203ENST00000423653 GYS1P13807 737 aa22.51■■□□□ 1.19
CCDC78-203ENST00000423653 GNAT3A8MTJ3 354 aa22.5■■□□□ 1.19
CCDC78-203ENST00000423653 CCDC87Q9NVE4 849 aa22.5■■□□□ 1.19
CCDC78-203ENST00000423653 TEFQ10587 303 aa22.49■■□□□ 1.19
CCDC78-203ENST00000423653 SLC39A6Q13433 755 aa22.49■■□□□ 1.19
CCDC78-203ENST00000423653 DNAJC10Q8IXB1 793 aa22.49■■□□□ 1.19
CCDC78-203ENST00000423653 TTC5Q8N0Z6 440 aa22.49■■□□□ 1.19
CCDC78-203ENST00000423653 VSIG10Q8N0Z9 540 aa22.49■■□□□ 1.19
CCDC78-203ENST00000423653 PARP3Q9Y6F1 533 aa22.49■■□□□ 1.19
CCDC78-203ENST00000423653 USP42Q9H9J4 1324 aaKnown RBP22.49■■□□□ 1.19
CCDC78-203ENST00000423653 SIPA1L3O60292 1781 aaPredicted RBP22.48■■□□□ 1.19
CCDC78-203ENST00000423653 PPP2R1AP30153 589 aa22.48■■□□□ 1.19
CCDC78-203ENST00000423653 PXDNLA1KZ92 1463 aa22.47■■□□□ 1.19
CCDC78-203ENST00000423653 PRKAR2BP31323 418 aa22.47■■□□□ 1.19
CCDC78-203ENST00000423653 KIAA1551Q9HCM1 1747 aa22.47■■□□□ 1.19
CCDC78-203ENST00000423653 INTS5Q6P9B9 1019 aaKnown RBP22.46■■□□□ 1.19
CCDC78-203ENST00000423653 RSPH6AQ9H0K4 717 aa22.46■■□□□ 1.19
CCDC78-203ENST00000423653 SOS1Q07889 1333 aaPredicted RBP22.46■■□□□ 1.19
CCDC78-203ENST00000423653 CYP19A1P11511 503 aaPredicted RBP22.45■■□□□ 1.18
CCDC78-203ENST00000423653 TGFB2P61812 414 aa22.45■■□□□ 1.18
CCDC78-203ENST00000423653 COL15A1P39059 1388 aa22.45■■□□□ 1.18
CCDC78-203ENST00000423653 ZPR1O75312 459 aa22.44■■□□□ 1.18
CCDC78-203ENST00000423653 U2AF1L5P0DN76 240 aaPredicted RBP22.44■■□□□ 1.18
CCDC78-203ENST00000423653 U2AF1Q01081 240 aaKnown RBP eCLIP22.44■■□□□ 1.18
CCDC78-203ENST00000423653 CEMIPQ8WUJ3 1361 aa22.44■■□□□ 1.18
CCDC78-203ENST00000423653 SRP68Q9UHB9 627 aaKnown RBP22.44■■□□□ 1.18
CCDC78-203ENST00000423653 N4BP2Q86UW6 1770 aaPredicted RBP22.43■■□□□ 1.18
CCDC78-203ENST00000423653 IL17REQ8NFR9 667 aa22.42■■□□□ 1.18
CCDC78-203ENST00000423653 WWC3Q9ULE0 1092 aa22.42■■□□□ 1.18
CCDC78-203ENST00000423653 STARD3NLO95772 234 aa22.41■■□□□ 1.18
CCDC78-203ENST00000423653 FKBP8Q14318 412 aa22.41■■□□□ 1.18
CCDC78-203ENST00000423653 ZNF790Q6PG37 636 aa22.41■■□□□ 1.18
CCDC78-203ENST00000423653 ZBTB1Q9Y2K1 713 aa22.41■■□□□ 1.18
CCDC78-203ENST00000423653 HEG1Q9ULI3 1381 aa22.4■■□□□ 1.18
CCDC78-203ENST00000423653 FCHSD2O94868 740 aa22.4■■□□□ 1.18
CCDC78-203ENST00000423653 RTF1Q92541 710 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms