RNA–Protein interactions for RNA: ENST00000423041.6

PAPD4-202, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAPD4, Length 3,223 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-202ENST00000423041 NOM1Q5C9Z4 860 aaKnown RBP11.2□□□□□ -0.62
PAPD4-202ENST00000423041 CCDC112Q8NEF3 446 aa11.2□□□□□ -0.62
PAPD4-202ENST00000423041 RWDD1Q9H446 243 aaPredicted RBP11.2□□□□□ -0.62
PAPD4-202ENST00000423041 LCMT1Q9UIC8 334 aa11.2□□□□□ -0.62
PAPD4-202ENST00000423041 ZC3H13Q5T200 1668 aaKnown RBP11.2□□□□□ -0.62
PAPD4-202ENST00000423041 NFATC2IPQ8NCF5 419 aa11.2□□□□□ -0.62
PAPD4-202ENST00000423041 CD2BP2O95400 341 aaKnown RBP11.2□□□□□ -0.62
PAPD4-202ENST00000423041 LRCH2Q5VUJ6 765 aa11.2□□□□□ -0.62
PAPD4-202ENST00000423041 KIF1BPQ96EK5 621 aa11.2□□□□□ -0.62
PAPD4-202ENST00000423041 RBM28Q9NW13 759 aaKnown RBP11.2□□□□□ -0.62
PAPD4-202ENST00000423041 SYNMO15061 1565 aa11.2□□□□□ -0.62
PAPD4-202ENST00000423041 WDR43Q15061 677 aaKnown RBP eCLIP11.19□□□□□ -0.62
PAPD4-202ENST00000423041 E2F4Q16254 413 aa11.19□□□□□ -0.62
PAPD4-202ENST00000423041 PYCARDQ9ULZ3 195 aa11.19□□□□□ -0.62
PAPD4-202ENST00000423041 RAD50Q92878 1312 aa11.19□□□□□ -0.62
PAPD4-202ENST00000423041 PREX1Q8TCU6 1659 aa11.19□□□□□ -0.62
PAPD4-202ENST00000423041 LTKP29376 864 aa11.19□□□□□ -0.62
PAPD4-202ENST00000423041 RBM6P78332 1123 aaKnown RBP11.19□□□□□ -0.62
PAPD4-202ENST00000423041 UVSSAQ2YD98 709 aa11.19□□□□□ -0.62
PAPD4-202ENST00000423041 PARD3Q8TEW0 1356 aa11.18□□□□□ -0.62
PAPD4-202ENST00000423041 PLEKHH1Q9ULM0 1364 aa11.18□□□□□ -0.62
PAPD4-202ENST00000423041 SLFN5Q08AF3 891 aa11.18□□□□□ -0.62
PAPD4-202ENST00000423041 PCDHB15Q9Y5E8 787 aa11.18□□□□□ -0.62
PAPD4-202ENST00000423041 MBD3O95983 291 aa11.18□□□□□ -0.62
PAPD4-202ENST00000423041 LRRFIP2Q9Y608 721 aaKnown RBP11.18□□□□□ -0.62
PAPD4-202ENST00000423041 SSR1P43307 286 aaKnown RBP11.18□□□□□ -0.62
PAPD4-202ENST00000423041 BMS1Q14692 1282 aaKnown RBP11.18□□□□□ -0.62
PAPD4-202ENST00000423041 ANKLE2Q86XL3 938 aa11.18□□□□□ -0.62
PAPD4-202ENST00000423041 FAM184AQ8NB25 1140 aa11.18□□□□□ -0.62
PAPD4-202ENST00000423041 CCDC189A1A4V9 331 aa11.17□□□□□ -0.62
PAPD4-202ENST00000423041 CALRP27797 417 aaKnown RBP11.17□□□□□ -0.62
PAPD4-202ENST00000423041 ATP6V1AP38606 617 aa11.17□□□□□ -0.62
PAPD4-202ENST00000423041 ZSCAN26Q16670 478 aa11.17□□□□□ -0.62
PAPD4-202ENST00000423041 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.17□□□□□ -0.62
PAPD4-202ENST00000423041 GTF3C6Q969F1 213 aa11.17□□□□□ -0.62
PAPD4-202ENST00000423041 ADAMTS8Q9UP79 889 aa11.17□□□□□ -0.62
PAPD4-202ENST00000423041 RIMS2Q9UQ26 1411 aa11.17□□□□□ -0.62
PAPD4-202ENST00000423041 RPGRIP1LQ68CZ1 1315 aa11.17□□□□□ -0.62
PAPD4-202ENST00000423041 TPM3P06753 285 aa11.17□□□□□ -0.62
PAPD4-202ENST00000423041 PLCB2Q00722 1185 aa11.17□□□□□ -0.62
PAPD4-202ENST00000423041 UHRF1BP1Q6BDS2 1440 aa11.17□□□□□ -0.62
PAPD4-202ENST00000423041 C3P01024 1663 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 GPS2Q13227 327 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 SRLQ86TD4 932 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 SYAP1Q96A49 352 aaPredicted RBP11.16□□□□□ -0.62
PAPD4-202ENST00000423041 CALR3Q96L12 384 aaKnown RBP11.16□□□□□ -0.62
PAPD4-202ENST00000423041 ATG3Q9NT62 314 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 NSFL1CQ9UNZ2 370 aaKnown RBP11.16□□□□□ -0.62
PAPD4-202ENST00000423041 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
PAPD4-202ENST00000423041 RRP15Q9Y3B9 282 aaKnown RBP11.16□□□□□ -0.62
PAPD4-202ENST00000423041 PAXBP1Q9Y5B6 917 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 NCKAP5LQ9HCH0 1330 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 ST20-MTHFSA0A0A6YYL1 179 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 RTF1Q92541 710 aaKnown RBP11.16□□□□□ -0.62
PAPD4-202ENST00000423041 KIF1BO60333 1816 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 PPP1R12AO14974 1030 aaPredicted RBP11.16□□□□□ -0.62
PAPD4-202ENST00000423041 MAP2K2P36507 400 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 GSCP56915 257 aaPredicted RBP11.16□□□□□ -0.62
PAPD4-202ENST00000423041 BIRC2Q13490 618 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 PPP2R5AQ15172 486 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 NBPF9Q3BBW0 867 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 TSGA10IPQ3SY00 556 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 FBXO38Q6PIJ6 1188 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 NBPF11Q86T75 865 aa11.16□□□□□ -0.62
PAPD4-202ENST00000423041 C16orf45Q96MC5 204 aaPredicted RBP11.16□□□□□ -0.62
PAPD4-202ENST00000423041 ANKRD20A12PQ8NF67 263 aa11.15□□□□□ -0.62
PAPD4-202ENST00000423041 PACS2Q86VP3 889 aa11.15□□□□□ -0.62
PAPD4-202ENST00000423041 TMEM2Q9UHN6 1383 aa11.15□□□□□ -0.62
PAPD4-202ENST00000423041 A2ML1A8K2U0 1454 aa11.15□□□□□ -0.62
PAPD4-202ENST00000423041 SPATA31D1Q6ZQQ2 1576 aa11.15□□□□□ -0.62
PAPD4-202ENST00000423041 RPAINQ86UA6 219 aa11.14□□□□□ -0.63
PAPD4-202ENST00000423041 RBM33Q96EV2 1170 aaKnown RBP11.14□□□□□ -0.63
PAPD4-202ENST00000423041 CFAP44Q96MT7 982 aa11.14□□□□□ -0.63
PAPD4-202ENST00000423041 PIK3C2BO00750 1634 aa11.14□□□□□ -0.63
PAPD4-202ENST00000423041 HTATSF1O43719 755 aaKnown RBP11.14□□□□□ -0.63
PAPD4-202ENST00000423041 KCNA4P22459 653 aa11.14□□□□□ -0.63
PAPD4-202ENST00000423041 TPM4P67936 248 aa11.14□□□□□ -0.63
PAPD4-202ENST00000423041 RBM42Q9BTD8 480 aaKnown RBP11.14□□□□□ -0.63
PAPD4-202ENST00000423041 NKTRP30414 1462 aaKnown RBP11.14□□□□□ -0.63
PAPD4-202ENST00000423041 PRAG1Q86YV5 1406 aa11.14□□□□□ -0.63
PAPD4-202ENST00000423041 POLR3GO15318 223 aaPredicted RBP11.14□□□□□ -0.63
PAPD4-202ENST00000423041 KCNF1Q9H3M0 494 aa11.14□□□□□ -0.63
PAPD4-202ENST00000423041 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.14□□□□□ -0.63
PAPD4-202ENST00000423041 V9GYY5 206 aaPredicted RBP11.14□□□□□ -0.63
PAPD4-202ENST00000423041 ZNF521Q96K83 1311 aa11.14□□□□□ -0.63
PAPD4-202ENST00000423041 ADAMTSL3P82987 1691 aa11.13□□□□□ -0.63
PAPD4-202ENST00000423041 TTC36A6NLP5 189 aa11.13□□□□□ -0.63
PAPD4-202ENST00000423041 PKP1Q13835 747 aa11.13□□□□□ -0.63
PAPD4-202ENST00000423041 ZNF526Q8TF50 670 aaPredicted RBP11.13□□□□□ -0.63
PAPD4-202ENST00000423041 KIF2CQ99661 725 aa11.13□□□□□ -0.63
PAPD4-202ENST00000423041 CYP2E1P05181 493 aaPredicted RBP11.13□□□□□ -0.63
PAPD4-202ENST00000423041 MCTP2Q6DN12 878 aa11.13□□□□□ -0.63
PAPD4-202ENST00000423041 MAGEA9P43362 315 aa11.13□□□□□ -0.63
PAPD4-202ENST00000423041 CDCA8Q53HL2 280 aa11.13□□□□□ -0.63
PAPD4-202ENST00000423041 SWT1Q5T5J6 900 aaKnown RBP11.13□□□□□ -0.63
PAPD4-202ENST00000423041 NBPF10Q6P3W6 841 aaKnown RBP11.13□□□□□ -0.63
PAPD4-202ENST00000423041 SETD1BQ9UPS6 1966 aaKnown RBP11.12□□□□□ -0.63
PAPD4-202ENST00000423041 SPC24Q8NBT2 197 aa11.12□□□□□ -0.63
PAPD4-202ENST00000423041 C14orf93Q9H972 538 aaKnown RBP11.12□□□□□ -0.63
PAPD4-202ENST00000423041 IFT57Q9NWB7 429 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms