RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 PKP1Q13835 747 aa7.48□□□□□ -1.21
CHD2-202ENST00000420239 IL16Q14005 1332 aa7.48□□□□□ -1.21
CHD2-202ENST00000420239 YEATS2Q9ULM3 1422 aa7.48□□□□□ -1.21
CHD2-202ENST00000420239 MAP3K7O43318 606 aa7.48□□□□□ -1.21
CHD2-202ENST00000420239 LRSAM1Q6UWE0 723 aa7.48□□□□□ -1.21
CHD2-202ENST00000420239 IPO4Q8TEX9 1081 aaKnown RBP7.48□□□□□ -1.21
CHD2-202ENST00000420239 PTCD2Q8WV60 388 aaKnown RBP7.48□□□□□ -1.21
CHD2-202ENST00000420239 POM121Q96HA1 1249 aa7.48□□□□□ -1.21
CHD2-202ENST00000420239 L3MBTL3Q96JM7 780 aaPredicted RBP7.48□□□□□ -1.21
CHD2-202ENST00000420239 ZBTB40Q9NUA8 1239 aa7.48□□□□□ -1.21
CHD2-202ENST00000420239 TMEM63CQ9P1W3 806 aa7.48□□□□□ -1.21
CHD2-202ENST00000420239 MED14O60244 1454 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 SSTR3P32745 418 aaPredicted RBP7.47□□□□□ -1.21
CHD2-202ENST00000420239 EVX2Q03828 476 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 TSR1Q2NL82 804 aaKnown RBP7.47□□□□□ -1.21
CHD2-202ENST00000420239 ATF7IPQ6VMQ6 1270 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 NLRP7Q8WX94 980 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 CHAMP1Q96JM3 812 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 NSFL1CQ9UNZ2 370 aaKnown RBP7.47□□□□□ -1.21
CHD2-202ENST00000420239 NSD2O96028 1365 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 KIF1BO60333 1816 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 ABCC1P33527 1531 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 SYCE3A1L190 88 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 TRIM27P14373 513 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 FTSJ3Q8IY81 847 aaKnown RBP7.47□□□□□ -1.21
CHD2-202ENST00000420239 PROCA1Q8NCQ7 364 aaPredicted RBP7.47□□□□□ -1.21
CHD2-202ENST00000420239 CHMP7Q8WUX9 453 aaPredicted RBP7.47□□□□□ -1.21
CHD2-202ENST00000420239 PRIMPOLQ96LW4 560 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 ZNF830Q96NB3 372 aaPredicted RBP7.47□□□□□ -1.21
CHD2-202ENST00000420239 PUS7Q96PZ0 661 aaKnown RBP7.47□□□□□ -1.21
CHD2-202ENST00000420239 LNPKQ9C0E8 428 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 BCL2L12Q9HB09 334 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 ABCC11Q96J66 1382 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 NSD3Q9BZ95 1437 aa7.47□□□□□ -1.21
CHD2-202ENST00000420239 VGLL3A8MV65 326 aa7.46□□□□□ -1.22
CHD2-202ENST00000420239 HMGN5P82970 282 aaKnown RBP7.46□□□□□ -1.22
CHD2-202ENST00000420239 SKIV2LQ15477 1246 aaKnown RBP7.46□□□□□ -1.22
CHD2-202ENST00000420239 TBC1D9Q6ZT07 1266 aa7.46□□□□□ -1.22
CHD2-202ENST00000420239 MORC1Q86VD1 984 aa7.46□□□□□ -1.22
CHD2-202ENST00000420239 PROSER2Q86WR7 435 aaPredicted RBP7.46□□□□□ -1.22
CHD2-202ENST00000420239 C17orf53Q8N3J3 647 aaPredicted RBP7.46□□□□□ -1.22
CHD2-202ENST00000420239 RNF214Q8ND24 703 aa7.46□□□□□ -1.22
CHD2-202ENST00000420239 BEGAINQ9BUH8 593 aa7.46□□□□□ -1.22
CHD2-202ENST00000420239 TRAPPC8Q9Y2L5 1435 aa7.46□□□□□ -1.22
CHD2-202ENST00000420239 IGSF3O75054 1194 aa7.46□□□□□ -1.22
CHD2-202ENST00000420239 PRPF40AO75400 957 aaKnown RBP7.46□□□□□ -1.22
CHD2-202ENST00000420239 NUCB2P80303 420 aa7.46□□□□□ -1.22
CHD2-202ENST00000420239 RBM33Q96EV2 1170 aaKnown RBP7.46□□□□□ -1.22
CHD2-202ENST00000420239 COLQQ9Y215 455 aaPredicted RBP7.46□□□□□ -1.22
CHD2-202ENST00000420239 ZDHHC9Q9Y397 364 aa7.46□□□□□ -1.22
CHD2-202ENST00000420239 PIK3R4Q99570 1358 aa7.45□□□□□ -1.22
CHD2-202ENST00000420239 CHD1LQ86WJ1 897 aa7.45□□□□□ -1.22
CHD2-202ENST00000420239 ITPRIPQ8IWB1 547 aa7.45□□□□□ -1.22
CHD2-202ENST00000420239 PIBF1Q8WXW3 757 aa7.45□□□□□ -1.22
CHD2-202ENST00000420239 CFAP53Q96M91 514 aa7.45□□□□□ -1.22
CHD2-202ENST00000420239 QRICH2Q9H0J4 1663 aa7.45□□□□□ -1.22
CHD2-202ENST00000420239 PLCH2O75038 1416 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 CD109Q6YHK3 1445 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 PHF14O94880 888 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 PTMAP06454 111 aaKnown RBP7.44□□□□□ -1.22
CHD2-202ENST00000420239 U2AF2P26368 475 aaKnown RBP eCLIP7.44□□□□□ -1.225e-18■■■□□ 14.6
CHD2-202ENST00000420239 ALDH1L2Q3SY69 923 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 FNBP4Q8N3X1 1017 aaPredicted RBP7.44□□□□□ -1.22
CHD2-202ENST00000420239 MPNDQ8N594 471 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 SSH1Q8WYL5 1049 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 NECTIN2Q92692 538 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 POLR3EQ9NVU0 708 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 PCDHGA10Q9Y5H3 936 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 ARAP3Q8WWN8 1544 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 COL3A1P02461 1466 aaPredicted RBP7.44□□□□□ -1.22
CHD2-202ENST00000420239 DNTTIP2Q5QJE6 756 aaKnown RBP7.44□□□□□ -1.22
CHD2-202ENST00000420239 TMEM57Q8N5G2 664 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 ANKRD7Q92527 254 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 GCC1Q96CN9 775 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 SMC4Q9NTJ3 1288 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 FAM217BQ9NTX9 383 aaPredicted RBP7.44□□□□□ -1.22
CHD2-202ENST00000420239 SPTLC3Q9NUV7 552 aa7.44□□□□□ -1.22
CHD2-202ENST00000420239 CGNQ9P2M7 1197 aaKnown RBP7.44□□□□□ -1.22
CHD2-202ENST00000420239 PPIP5K1Q6PFW1 1433 aa7.43□□□□□ -1.22
CHD2-202ENST00000420239 IPO8O15397 1037 aaKnown RBP7.43□□□□□ -1.22
CHD2-202ENST00000420239 EXOSC9Q06265 439 aaKnown RBP7.43□□□□□ -1.22
CHD2-202ENST00000420239 FKBP5Q13451 457 aaPredicted RBP7.43□□□□□ -1.22
CHD2-202ENST00000420239 NOLC1Q14978 699 aaKnown RBP eCLIP7.43□□□□□ -1.22
CHD2-202ENST00000420239 RABEP1Q15276 862 aa7.43□□□□□ -1.22
CHD2-202ENST00000420239 METTL3Q86U44 580 aaKnown RBP7.43□□□□□ -1.22
CHD2-202ENST00000420239 PDCL2Q8N4E4 241 aa7.43□□□□□ -1.22
CHD2-202ENST00000420239 ZGPATQ8N5A5 531 aaKnown RBP7.43□□□□□ -1.22
CHD2-202ENST00000420239 TSR2Q969E8 191 aaKnown RBP7.43□□□□□ -1.22
CHD2-202ENST00000420239 PLEKHF1Q96S99 279 aa7.43□□□□□ -1.22
CHD2-202ENST00000420239 CWC22Q9HCG8 908 aaKnown RBP7.43□□□□□ -1.22
CHD2-202ENST00000420239 KIF3AQ9Y496 699 aa7.43□□□□□ -1.22
CHD2-202ENST00000420239 AK9Q5TCS8 1911 aa7.43□□□□□ -1.22
CHD2-202ENST00000420239 ZFYVE16Q7Z3T8 1539 aa7.43□□□□□ -1.22
CHD2-202ENST00000420239 ANKRD26Q9UPS8 1709 aa7.43□□□□□ -1.22
CHD2-202ENST00000420239 MROH2AA6NES4 1674 aa7.43□□□□□ -1.22
CHD2-202ENST00000420239 MTHFSP49914 203 aa7.43□□□□□ -1.22
CHD2-202ENST00000420239 CFAP70Q5T0N1 1121 aa7.43□□□□□ -1.22
CHD2-202ENST00000420239 ZNF428Q96B54 188 aa7.43□□□□□ -1.22
CHD2-202ENST00000420239 EPAS1Q99814 870 aa7.43□□□□□ -1.22
CHD2-202ENST00000420239 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms