RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 CEMIPQ8WUJ3 1361 aa19.12■□□□□ 0.65
SEC24D-202ENST00000419654 NUCB1Q02818 461 aa19.12■□□□□ 0.65
SEC24D-202ENST00000419654 ZBTB7BO15156 539 aaPredicted RBP19.11■□□□□ 0.65
SEC24D-202ENST00000419654 BABAM1Q9NWV8 329 aa19.11■□□□□ 0.65
SEC24D-202ENST00000419654 NHSL1Q5SYE7 1610 aa19.11■□□□□ 0.65
SEC24D-202ENST00000419654 AMOTQ4VCS5 1084 aa19.1■□□□□ 0.65
SEC24D-202ENST00000419654 PLEKHO1Q53GL0 409 aaPredicted RBP19.1■□□□□ 0.65
SEC24D-202ENST00000419654 FOXD4L1Q9NU39 408 aa19.1■□□□□ 0.65
SEC24D-202ENST00000419654 FAM208AQ9UK61 1670 aaKnown RBP19.1■□□□□ 0.65
SEC24D-202ENST00000419654 TAF7Q15545 349 aaPredicted RBP19.09■□□□□ 0.65
SEC24D-202ENST00000419654 AKAP4Q5JQC9 854 aa19.09■□□□□ 0.65
SEC24D-202ENST00000419654 SIRT2Q8IXJ6 389 aa19.09■□□□□ 0.65
SEC24D-202ENST00000419654 APBB1O00213 710 aa19.08■□□□□ 0.65
SEC24D-202ENST00000419654 ABCC4O15439 1325 aa19.07■□□□□ 0.64
SEC24D-202ENST00000419654 ZNF530Q6P9A1 599 aaPredicted RBP19.07■□□□□ 0.64
SEC24D-202ENST00000419654 ABCA3Q99758 1704 aa19.06■□□□□ 0.64
SEC24D-202ENST00000419654 CHRNA2Q15822 529 aa19.06■□□□□ 0.64
SEC24D-202ENST00000419654 API5Q9BZZ5 524 aaKnown RBP19.05■□□□□ 0.64
SEC24D-202ENST00000419654 LGR6Q9HBX8 967 aa19.05■□□□□ 0.64
SEC24D-202ENST00000419654 OVOS2A0A0G2JMS6 1433 aa19.05■□□□□ 0.64
SEC24D-202ENST00000419654 SOS1Q07889 1333 aaPredicted RBP19.04■□□□□ 0.64
SEC24D-202ENST00000419654 HSCBQ8IWL3 235 aa19.04■□□□□ 0.64
SEC24D-202ENST00000419654 KDM3BQ7LBC6 1761 aa19.04■□□□□ 0.64
SEC24D-202ENST00000419654 ADAMTS7Q9UKP4 1686 aa19.04■□□□□ 0.64
SEC24D-202ENST00000419654 PLEKHG2Q9H7P9 1386 aa19.04■□□□□ 0.64
SEC24D-202ENST00000419654 RBM42Q9BTD8 480 aaKnown RBP19.04■□□□□ 0.64
SEC24D-202ENST00000419654 NLRP2Q9NX02 1062 aa19.04■□□□□ 0.64
SEC24D-202ENST00000419654 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.03■□□□□ 0.64
SEC24D-202ENST00000419654 RGS12O14924 1447 aa19.03■□□□□ 0.64
SEC24D-202ENST00000419654 C1orf141Q5JVX7 400 aa19.03■□□□□ 0.64
SEC24D-202ENST00000419654 ANO8Q9HCE9 1232 aaPredicted RBP19.03■□□□□ 0.64
SEC24D-202ENST00000419654 C16orf71Q8IYS4 520 aaPredicted RBP19.02■□□□□ 0.64
SEC24D-202ENST00000419654 LTBP4Q8N2S1 1624 aa19.01■□□□□ 0.63
SEC24D-202ENST00000419654 RNMTO43148 476 aaKnown RBP19.01■□□□□ 0.63
SEC24D-202ENST00000419654 PTPRCP08575 1304 aa19.01■□□□□ 0.63
SEC24D-202ENST00000419654 MPRIPQ6WCQ1 1025 aa19.01■□□□□ 0.63
SEC24D-202ENST00000419654 RAPGEF4Q8WZA2 1011 aa19.01■□□□□ 0.63
SEC24D-202ENST00000419654 MEGF6O75095 1541 aa19■□□□□ 0.63
SEC24D-202ENST00000419654 CD2BP2O95400 341 aaKnown RBP19■□□□□ 0.63
SEC24D-202ENST00000419654 CSB-PGBD3P0DP91 1061 aa19■□□□□ 0.63
SEC24D-202ENST00000419654 CHMP4BQ9H444 224 aaKnown RBP19■□□□□ 0.63
SEC24D-202ENST00000419654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19■□□□□ 0.638e-7■■□□□ 14.5
SEC24D-202ENST00000419654 SIPA1L3O60292 1781 aaPredicted RBP19■□□□□ 0.63
SEC24D-202ENST00000419654 SLC4A2P04920 1241 aa18.99■□□□□ 0.63
SEC24D-202ENST00000419654 MCM4P33991 863 aa18.99■□□□□ 0.63
SEC24D-202ENST00000419654 TBC1D9Q6ZT07 1266 aa18.99■□□□□ 0.63
SEC24D-202ENST00000419654 CACNA1FO60840 1977 aa18.99■□□□□ 0.63
SEC24D-202ENST00000419654 PRDM11Q9NQV5 511 aa18.99■□□□□ 0.63
SEC24D-202ENST00000419654 TATP17735 454 aaPredicted RBP18.98■□□□□ 0.63
SEC24D-202ENST00000419654 OTUD7AQ8TE49 926 aaPredicted RBP18.98■□□□□ 0.63
SEC24D-202ENST00000419654 TEFQ10587 303 aa18.98■□□□□ 0.63
SEC24D-202ENST00000419654 INTS3Q68E01 1043 aaKnown RBP18.98■□□□□ 0.63
SEC24D-202ENST00000419654 CHMP5Q9NZZ3 219 aa18.98■□□□□ 0.63
SEC24D-202ENST00000419654 PKD1L3Q7Z443 1732 aa18.98■□□□□ 0.63
SEC24D-202ENST00000419654 SMARCA5O60264 1052 aaPredicted RBP18.98■□□□□ 0.63
SEC24D-202ENST00000419654 HSP90AB1P08238 724 aaKnown RBP18.97■□□□□ 0.63
SEC24D-202ENST00000419654 BMP2KLQ5H9B9 411 aa18.97■□□□□ 0.63
SEC24D-202ENST00000419654 CCDC30Q5VVM6 783 aa18.97■□□□□ 0.63
SEC24D-202ENST00000419654 GCC1Q96CN9 775 aa18.97■□□□□ 0.63
SEC24D-202ENST00000419654 ROBO1Q9Y6N7 1651 aa18.97■□□□□ 0.63
SEC24D-202ENST00000419654 EIF4A1P60842 406 aaKnown RBP18.97■□□□□ 0.63
SEC24D-202ENST00000419654 SCN11AQ9UI33 1791 aa18.96■□□□□ 0.63
SEC24D-202ENST00000419654 COL5A2P05997 1499 aaPredicted RBP18.96■□□□□ 0.63
SEC24D-202ENST00000419654 WDR17Q8IZU2 1322 aa18.96■□□□□ 0.63
SEC24D-202ENST00000419654 HSP90AA1P07900 732 aaKnown RBP18.96■□□□□ 0.63
SEC24D-202ENST00000419654 SPG7Q9UQ90 795 aa18.96■□□□□ 0.63
SEC24D-202ENST00000419654 BTBD11A6QL63 1104 aa18.95■□□□□ 0.62
SEC24D-202ENST00000419654 G2E3Q7L622 706 aa18.95■□□□□ 0.62
SEC24D-202ENST00000419654 STK31Q9BXU1 1019 aa18.95■□□□□ 0.62
SEC24D-202ENST00000419654 AHDC1Q5TGY3 1603 aaPredicted RBP18.95■□□□□ 0.62
SEC24D-202ENST00000419654 NECTIN2Q92692 538 aa18.95■□□□□ 0.62
SEC24D-202ENST00000419654 KIF2CQ99661 725 aa18.95■□□□□ 0.62
SEC24D-202ENST00000419654 HOXB7P09629 217 aa18.94■□□□□ 0.62
SEC24D-202ENST00000419654 GSPT1P15170 499 aaKnown RBP18.94■□□□□ 0.62
SEC24D-202ENST00000419654 SLC4A10Q6U841 1118 aa18.94■□□□□ 0.62
SEC24D-202ENST00000419654 PHKG2P15735 406 aa18.94■□□□□ 0.62
SEC24D-202ENST00000419654 RBM25P49756 843 aaKnown RBP18.94■□□□□ 0.62
SEC24D-202ENST00000419654 F6X3S4 739 aa18.93■□□□□ 0.62
SEC24D-202ENST00000419654 KDM6AO15550 1401 aaPredicted RBP18.93■□□□□ 0.62
SEC24D-202ENST00000419654 KCNQ3O43525 872 aa18.93■□□□□ 0.62
SEC24D-202ENST00000419654 TRAK2O60296 914 aa18.93■□□□□ 0.62
SEC24D-202ENST00000419654 MEIS3Q99687 375 aa18.93■□□□□ 0.62
SEC24D-202ENST00000419654 PARP4Q9UKK3 1724 aaKnown RBP18.92■□□□□ 0.62
SEC24D-202ENST00000419654 HEG1Q9ULI3 1381 aa18.92■□□□□ 0.62
SEC24D-202ENST00000419654 PANK2Q9BZ23 570 aa18.92■□□□□ 0.62
SEC24D-202ENST00000419654 PLEKHM2Q8IWE5 1019 aa18.91■□□□□ 0.62
SEC24D-202ENST00000419654 IFNL2Q8IZJ0 200 aa18.91■□□□□ 0.62
SEC24D-202ENST00000419654 FLIIQ13045 1269 aa18.91■□□□□ 0.62
SEC24D-202ENST00000419654 HDGFL1Q5TGJ6 251 aa18.91■□□□□ 0.62
SEC24D-202ENST00000419654 CYP27B1O15528 508 aa18.9■□□□□ 0.62
SEC24D-202ENST00000419654 COL22A1Q8NFW1 1626 aaPredicted RBP18.9■□□□□ 0.62
SEC24D-202ENST00000419654 TOM1L2Q6ZVM7 507 aa18.89■□□□□ 0.62
SEC24D-202ENST00000419654 CHMP4AQ9BY43 222 aa18.89■□□□□ 0.62
SEC24D-202ENST00000419654 MRC1P22897 1456 aa18.89■□□□□ 0.61
SEC24D-202ENST00000419654 TNPO1Q92973 898 aaKnown RBP18.89■□□□□ 0.61
SEC24D-202ENST00000419654 CARD10Q9BWT7 1032 aa18.89■□□□□ 0.61
SEC24D-202ENST00000419654 SLC52A2Q9HAB3 445 aa18.88■□□□□ 0.61
SEC24D-202ENST00000419654 N4BP2Q86UW6 1770 aaPredicted RBP18.88■□□□□ 0.61
SEC24D-202ENST00000419654 CDC45O75419 566 aa18.87■□□□□ 0.61
SEC24D-202ENST00000419654 XRCC6P12956 609 aaKnown RBP eCLIP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms