RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 TMF1P82094 1093 aa21.37■■□□□ 1.01
PTPA-213ENST00000419582 SMC1BQ8NDV3 1235 aa21.37■■□□□ 1.01
PTPA-213ENST00000419582 ITPK1Q13572 414 aa21.36■■□□□ 1.01
PTPA-213ENST00000419582 CCDC87Q9NVE4 849 aa21.36■■□□□ 1.01
PTPA-213ENST00000419582 ADRA2BP18089 450 aa21.35■■□□□ 1.01
PTPA-213ENST00000419582 ITGB4P16144 1822 aa21.34■■□□□ 1.01
PTPA-213ENST00000419582 RRS1Q15050 365 aaKnown RBP21.34■■□□□ 1.01
PTPA-213ENST00000419582 TRAPPC3LQ5T215 181 aa21.34■■□□□ 1.01
PTPA-213ENST00000419582 DCAF5Q96JK2 942 aa21.34■■□□□ 1.01
PTPA-213ENST00000419582 RRAGCQ9HB90 399 aa21.34■■□□□ 1.01
PTPA-213ENST00000419582 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.34■■□□□ 1.01
PTPA-213ENST00000419582 SLC24A1O60721 1099 aa21.33■■□□□ 1.01
PTPA-213ENST00000419582 SLC34A2O95436 690 aa21.33■■□□□ 1.01
PTPA-213ENST00000419582 ATP6V1AP38606 617 aa21.33■■□□□ 1.01
PTPA-213ENST00000419582 RC3H1Q5TC82 1133 aaKnown RBP21.33■■□□□ 1.01
PTPA-213ENST00000419582 CARD11Q9BXL7 1154 aa21.33■■□□□ 1.01
PTPA-213ENST00000419582 PIM2Q9P1W9 311 aa21.33■■□□□ 1.01
PTPA-213ENST00000419582 N4BP2Q86UW6 1770 aaPredicted RBP21.33■■□□□ 1
PTPA-213ENST00000419582 ZC3H4Q9UPT8 1303 aaKnown RBP21.32■■□□□ 1
PTPA-213ENST00000419582 FYB1O15117 783 aa21.32■■□□□ 1
PTPA-213ENST00000419582 HSPA1AP0DMV8 641 aaKnown RBP21.32■■□□□ 1
PTPA-213ENST00000419582 HSPA1BP0DMV9 641 aaKnown RBP21.32■■□□□ 1
PTPA-213ENST00000419582 HSP90AB2PQ58FF8 381 aa21.32■■□□□ 1
PTPA-213ENST00000419582 RTCBQ9Y3I0 505 aaKnown RBP21.32■■□□□ 1
PTPA-213ENST00000419582 NCAPD2Q15021 1401 aa21.31■■□□□ 1
PTPA-213ENST00000419582 KCPQ6ZWJ8 1503 aa21.31■■□□□ 1
PTPA-213ENST00000419582 BRCA1P38398 1863 aaKnown RBP21.31■■□□□ 1
PTPA-213ENST00000419582 ASAP1Q9ULH1 1129 aa21.31■■□□□ 1
PTPA-213ENST00000419582 GYS1P13807 737 aa21.3■■□□□ 1
PTPA-213ENST00000419582 TMOD3Q9NYL9 352 aa21.3■■□□□ 1
PTPA-213ENST00000419582 SPG7Q9UQ90 795 aa21.3■■□□□ 1
PTPA-213ENST00000419582 ARFGEF1Q9Y6D6 1849 aa21.29■■□□□ 1
PTPA-213ENST00000419582 FLT4P35916 1363 aa21.29■■□□□ 1
PTPA-213ENST00000419582 DALRD3Q5D0E6 543 aaKnown RBP21.29■■□□□ 1
PTPA-213ENST00000419582 ARHGEF1Q92888 912 aaKnown RBP21.29■■□□□ 1
PTPA-213ENST00000419582 RNF181Q9P0P0 153 aa21.29■■□□□ 1
PTPA-213ENST00000419582 PARP3Q9Y6F1 533 aa21.29■■□□□ 1
PTPA-213ENST00000419582 SIN3AQ96ST3 1273 aa21.28■■□□□ 1
PTPA-213ENST00000419582 ATG3Q9NT62 314 aa21.28■■□□□ 1
PTPA-213ENST00000419582 PKD1L3Q7Z443 1732 aa21.28■■□□□ 1
PTPA-213ENST00000419582 TNRC6CQ9HCJ0 1690 aaKnown RBP21.27■■□□□ 1
PTPA-213ENST00000419582 TONSLQ96HA7 1378 aa21.26■□□□□ 0.99
PTPA-213ENST00000419582 RPS6KA4O75676 772 aa21.26■□□□□ 0.99
PTPA-213ENST00000419582 TESK2Q96S53 571 aa21.26■□□□□ 0.99
PTPA-213ENST00000419582 C4AP0C0L4 1744 aa21.26■□□□□ 0.99
PTPA-213ENST00000419582 KDRP35968 1356 aa21.25■□□□□ 0.99
PTPA-213ENST00000419582 VEGFAP15692 232 aaPredicted RBP21.25■□□□□ 0.99
PTPA-213ENST00000419582 ZNF831Q5JPB2 1677 aa21.24■□□□□ 0.99
PTPA-213ENST00000419582 RFC4P35249 363 aa21.24■□□□□ 0.99
PTPA-213ENST00000419582 CNTNAP4Q9C0A0 1308 aa21.24■□□□□ 0.99
PTPA-213ENST00000419582 KDM6AO15550 1401 aaPredicted RBP21.23■□□□□ 0.99
PTPA-213ENST00000419582 IFNL2Q8IZJ0 200 aa21.23■□□□□ 0.99
PTPA-213ENST00000419582 SLC4A9Q96Q91 983 aa21.23■□□□□ 0.99
PTPA-213ENST00000419582 GLTPD2A6NH11 291 aa21.22■□□□□ 0.99
PTPA-213ENST00000419582 GGNBP2Q9H3C7 697 aa21.22■□□□□ 0.99
PTPA-213ENST00000419582 PHKG2P15735 406 aa21.21■□□□□ 0.99
PTPA-213ENST00000419582 ERVV-2B6SEH9 535 aa21.19■□□□□ 0.98
PTPA-213ENST00000419582 NEUROD1Q13562 356 aa21.19■□□□□ 0.98
PTPA-213ENST00000419582 SBF1O95248 1867 aa21.19■□□□□ 0.98
PTPA-213ENST00000419582 PRDM10Q9NQV6 1147 aa21.18■□□□□ 0.98
PTPA-213ENST00000419582 LMNB1P20700 586 aa21.17■□□□□ 0.98
PTPA-213ENST00000419582 PCDH10Q9P2E7 1040 aa21.17■□□□□ 0.98
PTPA-213ENST00000419582 WASHC2AQ641Q2 1341 aa21.16■□□□□ 0.98
PTPA-213ENST00000419582 TM4SF1P30408 202 aa21.15■□□□□ 0.98
PTPA-213ENST00000419582 ST20-MTHFSA0A0A6YYL1 179 aa21.14■□□□□ 0.97
PTPA-213ENST00000419582 DDR1Q08345 913 aa21.14■□□□□ 0.97
PTPA-213ENST00000419582 EYA1Q99502 592 aa21.14■□□□□ 0.97
PTPA-213ENST00000419582 CREBZFQ9NS37 354 aa21.14■□□□□ 0.97
PTPA-213ENST00000419582 USP42Q9H9J4 1324 aaKnown RBP21.13■□□□□ 0.97
PTPA-213ENST00000419582 POTECB2RU33 542 aa21.13■□□□□ 0.97
PTPA-213ENST00000419582 CHRNA5P30532 468 aa21.13■□□□□ 0.97
PTPA-213ENST00000419582 FKBP8Q14318 412 aa21.13■□□□□ 0.97
PTPA-213ENST00000419582 RBM42Q9BTD8 480 aaKnown RBP21.12■□□□□ 0.97
PTPA-213ENST00000419582 EMILIN1Q9Y6C2 1016 aa21.12■□□□□ 0.97
PTPA-213ENST00000419582 POLRMTO00411 1230 aaKnown RBP21.11■□□□□ 0.97
PTPA-213ENST00000419582 HSP90AB1P08238 724 aaKnown RBP21.11■□□□□ 0.97
PTPA-213ENST00000419582 COL5A3P25940 1745 aaPredicted RBP21.11■□□□□ 0.97
PTPA-213ENST00000419582 MYH14Q7Z406 1995 aaKnown RBP21.09■□□□□ 0.97
PTPA-213ENST00000419582 RASSF7Q02833 373 aa21.08■□□□□ 0.97
PTPA-213ENST00000419582 DPY19L2Q6NUT2 758 aa21.08■□□□□ 0.97
PTPA-213ENST00000419582 FOXN1O15353 648 aa21.07■□□□□ 0.96
PTPA-213ENST00000419582 CRKLP46109 303 aaKnown RBP21.07■□□□□ 0.96
PTPA-213ENST00000419582 SRP68Q9UHB9 627 aaKnown RBP21.07■□□□□ 0.96
PTPA-213ENST00000419582 CTCFP49711 727 aaPredicted RBP21.05■□□□□ 0.96
PTPA-213ENST00000419582 CHADLQ6NUI6 762 aa21.05■□□□□ 0.96
PTPA-213ENST00000419582 TTLL6Q8N841 843 aa21.05■□□□□ 0.96
PTPA-213ENST00000419582 CNTNAP1P78357 1384 aa21.04■□□□□ 0.96
PTPA-213ENST00000419582 MKRN1Q9UHC7 482 aaKnown RBP21.03■□□□□ 0.96
PTPA-213ENST00000419582 ANKRD26Q9UPS8 1709 aa21.03■□□□□ 0.96
PTPA-213ENST00000419582 NFKBIEO00221 500 aa21.02■□□□□ 0.96
PTPA-213ENST00000419582 CABP4P57796 275 aa21.02■□□□□ 0.96
PTPA-213ENST00000419582 INTS5Q6P9B9 1019 aaKnown RBP21.02■□□□□ 0.96
PTPA-213ENST00000419582 CARD14Q9BXL6 1004 aa21.02■□□□□ 0.96
PTPA-213ENST00000419582 PPM1GO15355 546 aaPredicted RBP21.01■□□□□ 0.95
PTPA-213ENST00000419582 CDCA8Q53HL2 280 aa21.01■□□□□ 0.95
PTPA-213ENST00000419582 KIF20BQ96Q89 1820 aa21■□□□□ 0.95
PTPA-213ENST00000419582 ZPR1O75312 459 aa21■□□□□ 0.95
PTPA-213ENST00000419582 WBP1LQ9NX94 342 aa21■□□□□ 0.95
PTPA-213ENST00000419582 POLKQ9UBT6 870 aa21■□□□□ 0.95
PTPA-213ENST00000419582 PTCD1O75127 700 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms