RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 KDM3BQ7LBC6 1761 aa17.77■□□□□ 0.44
CHMP5-202ENST00000419016 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.77■□□□□ 0.44
CHMP5-202ENST00000419016 ELL2O00472 640 aaPredicted RBP17.77■□□□□ 0.43
CHMP5-202ENST00000419016 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.76■□□□□ 0.43
CHMP5-202ENST00000419016 BTBD11A6QL63 1104 aa17.75■□□□□ 0.43
CHMP5-202ENST00000419016 DDX54Q8TDD1 881 aaKnown RBP17.75■□□□□ 0.43
CHMP5-202ENST00000419016 BCL2L13Q9BXK5 485 aa17.75■□□□□ 0.43
CHMP5-202ENST00000419016 USP21Q9UK80 565 aa17.75■□□□□ 0.43
CHMP5-202ENST00000419016 TNS2Q63HR2 1409 aa17.75■□□□□ 0.43
CHMP5-202ENST00000419016 SOS1Q07889 1333 aaPredicted RBP17.75■□□□□ 0.43
CHMP5-202ENST00000419016 KCNQ3O43525 872 aa17.75■□□□□ 0.43
CHMP5-202ENST00000419016 EIF4A1P60842 406 aaKnown RBP17.75■□□□□ 0.43
CHMP5-202ENST00000419016 NFATC2IPQ8NCF5 419 aa17.75■□□□□ 0.43
CHMP5-202ENST00000419016 HEG1Q9ULI3 1381 aa17.74■□□□□ 0.43
CHMP5-202ENST00000419016 ERVV-2B6SEH9 535 aa17.74■□□□□ 0.43
CHMP5-202ENST00000419016 EXOC5O00471 708 aa17.74■□□□□ 0.43
CHMP5-202ENST00000419016 C20orf194Q5TEA3 1177 aa17.74■□□□□ 0.43
CHMP5-202ENST00000419016 SMC4Q9NTJ3 1288 aa17.74■□□□□ 0.43
CHMP5-202ENST00000419016 MEX3CQ5U5Q3 659 aaKnown RBP17.73■□□□□ 0.43
CHMP5-202ENST00000419016 MRPL50Q8N5N7 158 aaKnown RBP17.73■□□□□ 0.43
CHMP5-202ENST00000419016 PDE3AQ14432 1141 aa17.72■□□□□ 0.43
CHMP5-202ENST00000419016 AFF2P51816 1311 aa17.72■□□□□ 0.43
CHMP5-202ENST00000419016 CCDC9Q9Y3X0 531 aaKnown RBP17.71■□□□□ 0.43
CHMP5-202ENST00000419016 ZNF790Q6PG37 636 aa17.71■□□□□ 0.43
CHMP5-202ENST00000419016 HOXB7P09629 217 aa17.7■□□□□ 0.42
CHMP5-202ENST00000419016 CABP4P57796 275 aa17.7■□□□□ 0.42
CHMP5-202ENST00000419016 ATRNO75882 1429 aa17.7■□□□□ 0.42
CHMP5-202ENST00000419016 TOGARAM1Q9Y4F4 1720 aa17.7■□□□□ 0.42
CHMP5-202ENST00000419016 DDB1Q16531 1140 aa17.7■□□□□ 0.42
CHMP5-202ENST00000419016 FRAT1Q92837 279 aaPredicted RBP17.7■□□□□ 0.42
CHMP5-202ENST00000419016 NOB1Q9ULX3 412 aaKnown RBP17.69■□□□□ 0.42
CHMP5-202ENST00000419016 KIF16BQ96L93 1317 aa17.69■□□□□ 0.42
CHMP5-202ENST00000419016 SLC39A6Q13433 755 aa17.68■□□□□ 0.42
CHMP5-202ENST00000419016 FAM98CQ17RN3 349 aaKnown RBP17.68■□□□□ 0.42
CHMP5-202ENST00000419016 ZKSCAN2Q63HK3 967 aa17.68■□□□□ 0.42
CHMP5-202ENST00000419016 TCERG1O14776 1098 aaKnown RBP17.68■□□□□ 0.42
CHMP5-202ENST00000419016 EXOC6Q8TAG9 804 aa17.68■□□□□ 0.42
CHMP5-202ENST00000419016 ARHGAP45Q92619 1136 aa17.68■□□□□ 0.42
CHMP5-202ENST00000419016 TNNQ9UQP3 1299 aa17.68■□□□□ 0.42
CHMP5-202ENST00000419016 GIGYF1O75420 1035 aaPredicted RBP17.67■□□□□ 0.42
CHMP5-202ENST00000419016 GLI3P10071 1580 aa17.67■□□□□ 0.42
CHMP5-202ENST00000419016 ATF7IPQ6VMQ6 1270 aa17.67■□□□□ 0.42
CHMP5-202ENST00000419016 MARCH10Q8NA82 808 aaPredicted RBP17.67■□□□□ 0.42
CHMP5-202ENST00000419016 GJD4Q96KN9 370 aaPredicted RBP17.67■□□□□ 0.42
CHMP5-202ENST00000419016 CRBNQ96SW2 442 aa17.67■□□□□ 0.42
CHMP5-202ENST00000419016 ONECUT3O60422 494 aaPredicted RBP17.66■□□□□ 0.42
CHMP5-202ENST00000419016 RLBP1P12271 317 aa17.66■□□□□ 0.42
CHMP5-202ENST00000419016 TRIM27P14373 513 aa17.66■□□□□ 0.42
CHMP5-202ENST00000419016 IPO8O15397 1037 aaKnown RBP17.66■□□□□ 0.42
CHMP5-202ENST00000419016 FBXO41Q8TF61 875 aa17.66■□□□□ 0.42
CHMP5-202ENST00000419016 TRPC5Q9UL62 973 aaPredicted RBP17.66■□□□□ 0.42
CHMP5-202ENST00000419016 THSD7AQ9UPZ6 1657 aa17.66■□□□□ 0.42
CHMP5-202ENST00000419016 CANXP27824 592 aaKnown RBP17.65■□□□□ 0.42
CHMP5-202ENST00000419016 CCDC30Q5VVM6 783 aa17.65■□□□□ 0.42
CHMP5-202ENST00000419016 PANK1Q8TE04 598 aa17.65■□□□□ 0.42
CHMP5-202ENST00000419016 ZNF496Q96IT1 587 aaPredicted RBP17.65■□□□□ 0.42
CHMP5-202ENST00000419016 PPP4R2Q9NY27 417 aa17.64■□□□□ 0.41
CHMP5-202ENST00000419016 PAPPAQ13219 1627 aa17.64■□□□□ 0.41
CHMP5-202ENST00000419016 PIGBQ92521 554 aa17.64■□□□□ 0.41
CHMP5-202ENST00000419016 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
CHMP5-202ENST00000419016 DZIP1LQ8IYY4 767 aaKnown RBP17.63■□□□□ 0.41
CHMP5-202ENST00000419016 BCL9O00512 1426 aa17.63■□□□□ 0.41
CHMP5-202ENST00000419016 MS4A1P11836 297 aa17.62■□□□□ 0.41
CHMP5-202ENST00000419016 HDGFL1Q5TGJ6 251 aa17.62■□□□□ 0.41
CHMP5-202ENST00000419016 CHMP4AQ9BY43 222 aa17.62■□□□□ 0.41
CHMP5-202ENST00000419016 TMOD3Q9NYL9 352 aa17.62■□□□□ 0.41
CHMP5-202ENST00000419016 UBR2Q8IWV8 1755 aa17.62■□□□□ 0.41
CHMP5-202ENST00000419016 PRAMEF22A3QJZ6 481 aa17.62■□□□□ 0.41
CHMP5-202ENST00000419016 TTC5Q8N0Z6 440 aa17.62■□□□□ 0.41
CHMP5-202ENST00000419016 FMNL2Q96PY5 1086 aa17.62■□□□□ 0.41
CHMP5-202ENST00000419016 QTRT2Q9H974 415 aaKnown RBP17.62■□□□□ 0.41
CHMP5-202ENST00000419016 KCPQ6ZWJ8 1503 aa17.62■□□□□ 0.41
CHMP5-202ENST00000419016 ITGB4P16144 1822 aa17.61■□□□□ 0.41
CHMP5-202ENST00000419016 RGS12O14924 1447 aa17.61■□□□□ 0.41
CHMP5-202ENST00000419016 CLUAP1Q96AJ1 413 aa17.61■□□□□ 0.41
CHMP5-202ENST00000419016 PTPRCP08575 1304 aa17.61■□□□□ 0.41
CHMP5-202ENST00000419016 G2E3Q7L622 706 aa17.6■□□□□ 0.41
CHMP5-202ENST00000419016 STK31Q9BXU1 1019 aa17.6■□□□□ 0.41
CHMP5-202ENST00000419016 COG6Q9Y2V7 657 aa17.6■□□□□ 0.41
CHMP5-202ENST00000419016 ABCC4O15439 1325 aa17.6■□□□□ 0.41
CHMP5-202ENST00000419016 SNRPA1P09661 255 aaKnown RBP17.6■□□□□ 0.41
CHMP5-202ENST00000419016 EIF2S2P20042 333 aaKnown RBP17.59■□□□□ 0.41
CHMP5-202ENST00000419016 PRIM1P49642 420 aaKnown RBP17.59■□□□□ 0.41
CHMP5-202ENST00000419016 NECTIN2Q92692 538 aa17.59■□□□□ 0.41
CHMP5-202ENST00000419016 API5Q9BZZ5 524 aaKnown RBP17.59■□□□□ 0.41
CHMP5-202ENST00000419016 ATG3Q9NT62 314 aa17.59■□□□□ 0.41
CHMP5-202ENST00000419016 CACNA1FO60840 1977 aa17.59■□□□□ 0.41
CHMP5-202ENST00000419016 MVPQ14764 893 aaKnown RBP17.59■□□□□ 0.41
CHMP5-202ENST00000419016 ASAP1Q9ULH1 1129 aa17.59■□□□□ 0.41
CHMP5-202ENST00000419016 DOT1LQ8TEK3 1739 aa17.58■□□□□ 0.41
CHMP5-202ENST00000419016 C5P01031 1676 aa17.58■□□□□ 0.41
CHMP5-202ENST00000419016 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.4
CHMP5-202ENST00000419016 TMEM57Q8N5G2 664 aa17.57■□□□□ 0.4
CHMP5-202ENST00000419016 CHPF2Q9P2E5 772 aa17.57■□□□□ 0.4
CHMP5-202ENST00000419016 FLIIQ13045 1269 aa17.57■□□□□ 0.4
CHMP5-202ENST00000419016 PDIA6Q15084 440 aa17.57■□□□□ 0.4
CHMP5-202ENST00000419016 DBF4Q9UBU7 674 aaPredicted RBP17.57■□□□□ 0.4
CHMP5-202ENST00000419016 USP16Q9Y5T5 823 aa17.57■□□□□ 0.4
CHMP5-202ENST00000419016 AAMPQ13685 434 aa17.55■□□□□ 0.4
CHMP5-202ENST00000419016 ZNF772Q68DY9 489 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms