RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 CCDC196A0A1B0GTZ2 297 aa11.99□□□□□ -0.49
SATB1-204ENST00000417717 ATRIPQ8WXE1 791 aa11.99□□□□□ -0.49
SATB1-204ENST00000417717 VCXQ9H320 206 aa11.99□□□□□ -0.49
SATB1-204ENST00000417717 MAGEC2Q9UBF1 373 aaPredicted RBP11.99□□□□□ -0.49
SATB1-204ENST00000417717 KIF4AO95239 1232 aa11.99□□□□□ -0.49
SATB1-204ENST00000417717 ARHGAP25P42331 645 aa11.99□□□□□ -0.49
SATB1-204ENST00000417717 LRSAM1Q6UWE0 723 aa11.99□□□□□ -0.49
SATB1-204ENST00000417717 ARFGAP2Q8N6H7 521 aa11.99□□□□□ -0.49
SATB1-204ENST00000417717 API5Q9BZZ5 524 aaKnown RBP11.99□□□□□ -0.49
SATB1-204ENST00000417717 NSRP1Q9H0G5 558 aaKnown RBP11.99□□□□□ -0.49
SATB1-204ENST00000417717 IFFO1Q0D2I5 559 aa11.99□□□□□ -0.49
SATB1-204ENST00000417717 ZSCAN26Q16670 478 aa11.99□□□□□ -0.49
SATB1-204ENST00000417717 ZNF608Q9ULD9 1512 aaPredicted RBP11.99□□□□□ -0.49
SATB1-204ENST00000417717 U2AF2P26368 475 aaKnown RBP eCLIP11.99□□□□□ -0.49
SATB1-204ENST00000417717 PAFAH1B1P43034 410 aa11.99□□□□□ -0.49
SATB1-204ENST00000417717 SLC4A10Q6U841 1118 aa11.99□□□□□ -0.49
SATB1-204ENST00000417717 VPS18Q9P253 973 aa11.99□□□□□ -0.49
SATB1-204ENST00000417717 KANK1Q14678 1352 aa11.99□□□□□ -0.49
SATB1-204ENST00000417717 SPECC1Q5M775 1068 aa11.98□□□□□ -0.49
SATB1-204ENST00000417717 TBC1D2Q9BYX2 928 aa11.98□□□□□ -0.49
SATB1-204ENST00000417717 CFAP100Q494V2 611 aa11.98□□□□□ -0.49
SATB1-204ENST00000417717 ERO1AQ96HE7 468 aa11.98□□□□□ -0.49
SATB1-204ENST00000417717 BRPF1P55201 1214 aaPredicted RBP11.98□□□□□ -0.49
SATB1-204ENST00000417717 ZNF365Q70YC5 407 aa11.98□□□□□ -0.49
SATB1-204ENST00000417717 PPFIBP2Q8ND30 876 aa11.98□□□□□ -0.49
SATB1-204ENST00000417717 ANO10Q9NW15 660 aa11.98□□□□□ -0.49
SATB1-204ENST00000417717 HFM1A2PYH4 1435 aa11.98□□□□□ -0.49
SATB1-204ENST00000417717 ZKSCAN8Q15776 578 aaPredicted RBP11.98□□□□□ -0.49
SATB1-204ENST00000417717 OSCARQ8IYS5 282 aa11.98□□□□□ -0.49
SATB1-204ENST00000417717 TAF4BQ92750 862 aa11.98□□□□□ -0.49
SATB1-204ENST00000417717 JRKLQ9Y4A0 524 aa11.98□□□□□ -0.49
SATB1-204ENST00000417717 LACTBP83111 547 aaPredicted RBP11.97□□□□□ -0.49
SATB1-204ENST00000417717 STK38Q15208 465 aa11.97□□□□□ -0.49
SATB1-204ENST00000417717 MICAL1Q8TDZ2 1067 aa11.97□□□□□ -0.49
SATB1-204ENST00000417717 NAP1L3Q99457 506 aaPredicted RBP11.97□□□□□ -0.49
SATB1-204ENST00000417717 NAA15Q9BXJ9 866 aaKnown RBP11.97□□□□□ -0.49
SATB1-204ENST00000417717 ESF1Q9H501 851 aaKnown RBP11.97□□□□□ -0.49
SATB1-204ENST00000417717 ICE2Q659A1 982 aa11.97□□□□□ -0.49
SATB1-204ENST00000417717 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.97□□□□□ -0.49
SATB1-204ENST00000417717 HSF2BPO75031 334 aa11.97□□□□□ -0.49
SATB1-204ENST00000417717 CCDC150Q8NCX0 1101 aa11.97□□□□□ -0.49
SATB1-204ENST00000417717 PLEKHH2Q8IVE3 1493 aa11.96□□□□□ -0.49
SATB1-204ENST00000417717 KLHL10Q6JEL2 608 aa11.96□□□□□ -0.49
SATB1-204ENST00000417717 CCDC38Q502W7 563 aa11.96□□□□□ -0.5
SATB1-204ENST00000417717 SPAG9O60271 1321 aaKnown RBP11.96□□□□□ -0.5
SATB1-204ENST00000417717 STAMBPO95630 424 aa11.96□□□□□ -0.5
SATB1-204ENST00000417717 SPATA32Q96LK8 384 aa11.96□□□□□ -0.5
SATB1-204ENST00000417717 STIM2Q9P246 746 aa11.96□□□□□ -0.5
SATB1-204ENST00000417717 TARBP1Q13395 1621 aaKnown RBP11.95□□□□□ -0.5
SATB1-204ENST00000417717 AKNAQ7Z591 1439 aa11.95□□□□□ -0.5
SATB1-204ENST00000417717 HMGB1P1B2RPK0 211 aaPredicted RBP11.95□□□□□ -0.5
SATB1-204ENST00000417717 PCK1P35558 622 aa11.95□□□□□ -0.5
SATB1-204ENST00000417717 EPS15P42566 896 aa11.95□□□□□ -0.5
SATB1-204ENST00000417717 ZSCAN23Q3MJ62 389 aa11.95□□□□□ -0.5
SATB1-204ENST00000417717 CCDC158Q5M9N0 1113 aa11.95□□□□□ -0.5
SATB1-204ENST00000417717 CEP128Q6ZU80 1094 aa11.95□□□□□ -0.5
SATB1-204ENST00000417717 CTCFLQ8NI51 663 aaPredicted RBP11.95□□□□□ -0.5
SATB1-204ENST00000417717 GTF3C6Q969F1 213 aa11.95□□□□□ -0.5
SATB1-204ENST00000417717 ATP2C2O75185 946 aa11.95□□□□□ -0.5
SATB1-204ENST00000417717 CTAGE5O15320 804 aa11.95□□□□□ -0.5
SATB1-204ENST00000417717 BUB1BO60566 1050 aaPredicted RBP11.95□□□□□ -0.5
SATB1-204ENST00000417717 TOP1P11387 765 aaKnown RBP11.95□□□□□ -0.5
SATB1-204ENST00000417717 ERCC3P19447 782 aa11.95□□□□□ -0.5
SATB1-204ENST00000417717 LRRC23Q53EV4 343 aaPredicted RBP11.95□□□□□ -0.5
SATB1-204ENST00000417717 CASTP20810 708 aaKnown RBP11.94□□□□□ -0.5
SATB1-204ENST00000417717 RFC1P35251 1148 aaPredicted RBP11.94□□□□□ -0.5
SATB1-204ENST00000417717 CEP120Q8N960 986 aa11.94□□□□□ -0.5
SATB1-204ENST00000417717 GCC1Q96CN9 775 aa11.94□□□□□ -0.5
SATB1-204ENST00000417717 CCDC113Q9H0I3 377 aa11.94□□□□□ -0.5
SATB1-204ENST00000417717 APAF1O14727 1248 aa11.94□□□□□ -0.5
SATB1-204ENST00000417717 BAG4O95429 457 aaKnown RBP11.94□□□□□ -0.5
SATB1-204ENST00000417717 MAP7Q14244 749 aa11.94□□□□□ -0.5
SATB1-204ENST00000417717 TSNAXIP1Q2TAA8 658 aa11.94□□□□□ -0.5
SATB1-204ENST00000417717 GOLGA1Q92805 767 aa11.94□□□□□ -0.5
SATB1-204ENST00000417717 ME1P48163 572 aa11.94□□□□□ -0.5
SATB1-204ENST00000417717 GNG11P61952 73 aa11.94□□□□□ -0.5
SATB1-204ENST00000417717 BIRC2Q13490 618 aa11.94□□□□□ -0.5
SATB1-204ENST00000417717 NEDD9Q14511 834 aa11.94□□□□□ -0.5
SATB1-204ENST00000417717 L3MBTL2Q969R5 705 aa11.94□□□□□ -0.5
SATB1-204ENST00000417717 HDXQ7Z353 690 aa11.93□□□□□ -0.5
SATB1-204ENST00000417717 FAM76AQ8TAV0 307 aa11.93□□□□□ -0.5
SATB1-204ENST00000417717 NUP155O75694 1391 aa11.93□□□□□ -0.5
SATB1-204ENST00000417717 TACC1O75410 805 aa11.93□□□□□ -0.5
SATB1-204ENST00000417717 PEX19P40855 299 aa11.93□□□□□ -0.5
SATB1-204ENST00000417717 PANK1Q8TE04 598 aa11.93□□□□□ -0.5
SATB1-204ENST00000417717 SCAND2PQ9GZW5 306 aaPredicted RBP11.93□□□□□ -0.5
SATB1-204ENST00000417717 RAI14Q9P0K7 980 aa11.93□□□□□ -0.5
SATB1-204ENST00000417717 CNTLNQ9NXG0 1405 aa11.93□□□□□ -0.5
SATB1-204ENST00000417717 CACNA2D3Q8IZS8 1091 aa11.93□□□□□ -0.5
SATB1-204ENST00000417717 BRD4O60885 1362 aaPredicted RBP11.93□□□□□ -0.5
SATB1-204ENST00000417717 ANKRD18BA2A2Z9 1011 aa11.93□□□□□ -0.5
SATB1-204ENST00000417717 TRDNQ13061 729 aa11.93□□□□□ -0.5
SATB1-204ENST00000417717 WHAMMQ8TF30 809 aa11.93□□□□□ -0.5
SATB1-204ENST00000417717 STAC3Q96MF2 364 aa11.93□□□□□ -0.5
SATB1-204ENST00000417717 DDX19AQ9NUU7 478 aaKnown RBP11.93□□□□□ -0.5
SATB1-204ENST00000417717 PPP6R1Q9UPN7 881 aa11.93□□□□□ -0.5
SATB1-204ENST00000417717 CTAGE15A4D2H0 777 aa11.92□□□□□ -0.5
SATB1-204ENST00000417717 ERC2O15083 957 aa11.92□□□□□ -0.5
SATB1-204ENST00000417717 PFDN1O60925 122 aa11.92□□□□□ -0.5
SATB1-204ENST00000417717 CTAGE8P0CG41 777 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms