RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 BACH2Q9BYV9 841 aa24.35■■□□□ 1.49
RAB3IP-205ENST00000417413 TATP17735 454 aaPredicted RBP24.35■■□□□ 1.49
RAB3IP-205ENST00000417413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.35■■□□□ 1.491e-6■■□□□ 13.1
RAB3IP-205ENST00000417413 EIF4A1P60842 406 aaKnown RBP24.34■■□□□ 1.49
RAB3IP-205ENST00000417413 TEFQ10587 303 aa24.34■■□□□ 1.49
RAB3IP-205ENST00000417413 CCDC30Q5VVM6 783 aa24.34■■□□□ 1.49
RAB3IP-205ENST00000417413 G2E3Q7L622 706 aa24.34■■□□□ 1.49
RAB3IP-205ENST00000417413 RGS3P49796 1198 aa24.33■■□□□ 1.49
RAB3IP-205ENST00000417413 PDZRN3Q9UPQ7 1066 aa24.32■■□□□ 1.48
RAB3IP-205ENST00000417413 STK31Q9BXU1 1019 aa24.32■■□□□ 1.48
RAB3IP-205ENST00000417413 COL5A2P05997 1499 aaPredicted RBP24.31■■□□□ 1.48
RAB3IP-205ENST00000417413 KCNQ3O43525 872 aa24.31■■□□□ 1.48
RAB3IP-205ENST00000417413 SPG7Q9UQ90 795 aa24.31■■□□□ 1.48
RAB3IP-205ENST00000417413 PHLPP1O60346 1717 aa24.31■■□□□ 1.48
RAB3IP-205ENST00000417413 WDR17Q8IZU2 1322 aa24.3■■□□□ 1.48
RAB3IP-205ENST00000417413 BTBD11A6QL63 1104 aa24.3■■□□□ 1.48
RAB3IP-205ENST00000417413 PARP4Q9UKK3 1724 aaKnown RBP24.29■■□□□ 1.48
RAB3IP-205ENST00000417413 HOXB7P09629 217 aa24.29■■□□□ 1.48
RAB3IP-205ENST00000417413 SMC5Q8IY18 1101 aa24.29■■□□□ 1.48
RAB3IP-205ENST00000417413 N4BP2Q86UW6 1770 aaPredicted RBP24.29■■□□□ 1.48
RAB3IP-205ENST00000417413 KDM6AO15550 1401 aaPredicted RBP24.29■■□□□ 1.48
RAB3IP-205ENST00000417413 COL16A1Q07092 1604 aaPredicted RBP24.29■■□□□ 1.48
RAB3IP-205ENST00000417413 PHKG2P15735 406 aa24.28■■□□□ 1.48
RAB3IP-205ENST00000417413 COL22A1Q8NFW1 1626 aaPredicted RBP24.27■■□□□ 1.48
RAB3IP-205ENST00000417413 JCADQ9P266 1359 aa24.26■■□□□ 1.47
RAB3IP-205ENST00000417413 HEG1Q9ULI3 1381 aa24.26■■□□□ 1.47
RAB3IP-205ENST00000417413 NECTIN2Q92692 538 aa24.26■■□□□ 1.47
RAB3IP-205ENST00000417413 EVA1CP58658 441 aa24.25■■□□□ 1.47
RAB3IP-205ENST00000417413 FLIIQ13045 1269 aa24.25■■□□□ 1.47
RAB3IP-205ENST00000417413 HDGFL1Q5TGJ6 251 aa24.25■■□□□ 1.47
RAB3IP-205ENST00000417413 IFNL2Q8IZJ0 200 aa24.25■■□□□ 1.47
RAB3IP-205ENST00000417413 C1orf115Q9H7X2 142 aa24.25■■□□□ 1.47
RAB3IP-205ENST00000417413 MRC1P22897 1456 aa24.24■■□□□ 1.47
RAB3IP-205ENST00000417413 FAM161AQ3B820 660 aa24.24■■□□□ 1.47
RAB3IP-205ENST00000417413 SIRT2Q8IXJ6 389 aa24.24■■□□□ 1.47
RAB3IP-205ENST00000417413 F6X3S4 739 aa24.23■■□□□ 1.47
RAB3IP-205ENST00000417413 CYP27B1O15528 508 aa24.23■■□□□ 1.47
RAB3IP-205ENST00000417413 C8orf34Q49A92 452 aa24.23■■□□□ 1.47
RAB3IP-205ENST00000417413 TOM1L2Q6ZVM7 507 aa24.22■■□□□ 1.47
RAB3IP-205ENST00000417413 CCT4P50991 539 aaKnown RBP24.21■■□□□ 1.47
RAB3IP-205ENST00000417413 CHMP4AQ9BY43 222 aa24.21■■□□□ 1.47
RAB3IP-205ENST00000417413 SLC52A2Q9HAB3 445 aa24.21■■□□□ 1.47
RAB3IP-205ENST00000417413 CARD10Q9BWT7 1032 aa24.21■■□□□ 1.47
RAB3IP-205ENST00000417413 SHANK3Q9BYB0 1731 aa24.2■■□□□ 1.46
RAB3IP-205ENST00000417413 PXDNLA1KZ92 1463 aa24.19■■□□□ 1.46
RAB3IP-205ENST00000417413 ATP10DQ9P241 1426 aa24.19■■□□□ 1.46
RAB3IP-205ENST00000417413 GIGYF1O75420 1035 aaPredicted RBP24.19■■□□□ 1.46
RAB3IP-205ENST00000417413 EIF2S2P20042 333 aaKnown RBP24.19■■□□□ 1.46
RAB3IP-205ENST00000417413 FKBP5Q13451 457 aaPredicted RBP24.19■■□□□ 1.46
RAB3IP-205ENST00000417413 DCAF5Q96JK2 942 aa24.19■■□□□ 1.46
RAB3IP-205ENST00000417413 SPATA31A6Q5VVP1 1343 aa24.18■■□□□ 1.46
RAB3IP-205ENST00000417413 MEIS3Q99687 375 aa24.18■■□□□ 1.46
RAB3IP-205ENST00000417413 BTG4Q9NY30 223 aa24.18■■□□□ 1.46
RAB3IP-205ENST00000417413 COL14A1Q05707 1796 aaKnown RBP24.18■■□□□ 1.46
RAB3IP-205ENST00000417413 HSP90AB1P08238 724 aaKnown RBP24.17■■□□□ 1.46
RAB3IP-205ENST00000417413 NUCB1Q02818 461 aa24.17■■□□□ 1.46
RAB3IP-205ENST00000417413 SLC4A10Q6U841 1118 aa24.17■■□□□ 1.46
RAB3IP-205ENST00000417413 GCC1Q96CN9 775 aa24.17■■□□□ 1.46
RAB3IP-205ENST00000417413 PHAXQ9H814 394 aaKnown RBP24.17■■□□□ 1.46
RAB3IP-205ENST00000417413 STRN4Q9NRL3 753 aa24.17■■□□□ 1.46
RAB3IP-205ENST00000417413 C5P01031 1676 aa24.17■■□□□ 1.46
RAB3IP-205ENST00000417413 NUTM2BA6NNL0 878 aaPredicted RBP24.17■■□□□ 1.46
RAB3IP-205ENST00000417413 NUTM2EB1AL46 878 aaPredicted RBP24.17■■□□□ 1.46
RAB3IP-205ENST00000417413 LARP1Q6PKG0 1096 aaKnown RBP24.17■■□□□ 1.46
RAB3IP-205ENST00000417413 NUTM2AQ8IVF1 878 aaPredicted RBP24.17■■□□□ 1.46
RAB3IP-205ENST00000417413 CHPF2Q9P2E5 772 aa24.17■■□□□ 1.46
RAB3IP-205ENST00000417413 ADAMTS2O95450 1211 aa24.16■■□□□ 1.46
RAB3IP-205ENST00000417413 NFATC2IPQ8NCF5 419 aa24.16■■□□□ 1.46
RAB3IP-205ENST00000417413 ANKRD44Q8N8A2 993 aa24.15■■□□□ 1.46
RAB3IP-205ENST00000417413 ZCRB1Q8TBF4 217 aaKnown RBP24.15■■□□□ 1.46
RAB3IP-205ENST00000417413 ZNF790Q6PG37 636 aa24.14■■□□□ 1.46
RAB3IP-205ENST00000417413 RPAP2Q8IXW5 612 aaPredicted RBP24.14■■□□□ 1.46
RAB3IP-205ENST00000417413 IL2RBP14784 551 aa24.13■■□□□ 1.45
RAB3IP-205ENST00000417413 PCDH11XQ9BZA7 1347 aa24.13■■□□□ 1.45
RAB3IP-205ENST00000417413 PCDH11YQ9BZA8 1340 aa24.13■■□□□ 1.45
RAB3IP-205ENST00000417413 SLC39A6Q13433 755 aa24.13■■□□□ 1.45
RAB3IP-205ENST00000417413 CEP85Q6P2H3 762 aa24.13■■□□□ 1.45
RAB3IP-205ENST00000417413 PRAMEF22A3QJZ6 481 aa24.12■■□□□ 1.45
RAB3IP-205ENST00000417413 CHD1LQ86WJ1 897 aa24.12■■□□□ 1.45
RAB3IP-205ENST00000417413 DBF4Q9UBU7 674 aaPredicted RBP24.12■■□□□ 1.45
RAB3IP-205ENST00000417413 HSPA1LP34931 641 aa24.11■■□□□ 1.45
RAB3IP-205ENST00000417413 DCTPP1Q9H773 170 aa24.1■■□□□ 1.45
RAB3IP-205ENST00000417413 MSH5O43196 834 aa24.1■■□□□ 1.45
RAB3IP-205ENST00000417413 ANP32AP39687 249 aaKnown RBP24.1■■□□□ 1.45
RAB3IP-205ENST00000417413 NKX1-1Q15270 411 aaPredicted RBP24.1■■□□□ 1.45
RAB3IP-205ENST00000417413 ANXA1P04083 346 aa24.09■■□□□ 1.45
RAB3IP-205ENST00000417413 CABP4P57796 275 aa24.08■■□□□ 1.45
RAB3IP-205ENST00000417413 LNPKQ9C0E8 428 aa24.08■■□□□ 1.45
RAB3IP-205ENST00000417413 GLI3P10071 1580 aa24.08■■□□□ 1.45
RAB3IP-205ENST00000417413 PROSER3Q2NL68 480 aa24.07■■□□□ 1.44
RAB3IP-205ENST00000417413 ANKRD45Q5TZF3 282 aa24.07■■□□□ 1.44
RAB3IP-205ENST00000417413 ADCY9O60503 1353 aa24.07■■□□□ 1.44
RAB3IP-205ENST00000417413 PAPPAQ13219 1627 aa24.06■■□□□ 1.44
RAB3IP-205ENST00000417413 GNAI3P08754 354 aa24.06■■□□□ 1.44
RAB3IP-205ENST00000417413 ZNF496Q96IT1 587 aaPredicted RBP24.06■■□□□ 1.44
RAB3IP-205ENST00000417413 UBR2Q8IWV8 1755 aa24.06■■□□□ 1.44
RAB3IP-205ENST00000417413 PLCH1Q4KWH8 1693 aa24.06■■□□□ 1.44
RAB3IP-205ENST00000417413 GNAI2P04899 355 aa24.06■■□□□ 1.44
RAB3IP-205ENST00000417413 LAMB4A4D0S4 1761 aa24.05■■□□□ 1.44
RAB3IP-205ENST00000417413 PDIA6Q15084 440 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms