RNA–Protein interactions for RNA: ENST00000417107.5

HDAC7-204, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-204ENST00000417107 C4BP0C0L5 1744 aa24.29■■□□□ 1.48
HDAC7-204ENST00000417107 PLEKHG2Q9H7P9 1386 aa24.29■■□□□ 1.48
HDAC7-204ENST00000417107 PHF14O94880 888 aa24.28■■□□□ 1.48
HDAC7-204ENST00000417107 HMGB2P26583 209 aaKnown RBP24.27■■□□□ 1.48
HDAC7-204ENST00000417107 ITPK1Q13572 414 aa24.27■■□□□ 1.48
HDAC7-204ENST00000417107 FLAD1Q8NFF5 587 aa24.27■■□□□ 1.48
HDAC7-204ENST00000417107 NLGN2Q8NFZ4 835 aa24.27■■□□□ 1.48
HDAC7-204ENST00000417107 UTRNP46939 3433 aa24.26■■□□□ 1.47
HDAC7-204ENST00000417107 AMOTQ4VCS5 1084 aa24.26■■□□□ 1.47
HDAC7-204ENST00000417107 DCAF5Q96JK2 942 aa24.26■■□□□ 1.47
HDAC7-204ENST00000417107 ATP6V1AP38606 617 aa24.25■■□□□ 1.47
HDAC7-204ENST00000417107 RALBP1Q15311 655 aa24.25■■□□□ 1.47
HDAC7-204ENST00000417107 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.24■■□□□ 1.47
HDAC7-204ENST00000417107 ERVV-2B6SEH9 535 aa24.24■■□□□ 1.47
HDAC7-204ENST00000417107 HSP90AB1P08238 724 aaKnown RBP24.24■■□□□ 1.47
HDAC7-204ENST00000417107 GPR162Q16538 588 aa24.24■■□□□ 1.47
HDAC7-204ENST00000417107 PELP1Q8IZL8 1130 aaKnown RBP24.24■■□□□ 1.47
HDAC7-204ENST00000417107 KDM6AO15550 1401 aaPredicted RBP24.24■■□□□ 1.47
HDAC7-204ENST00000417107 U2SURPO15042 1029 aaKnown RBP24.22■■□□□ 1.47
HDAC7-204ENST00000417107 CABP4P57796 275 aa24.22■■□□□ 1.47
HDAC7-204ENST00000417107 C1orf141Q5JVX7 400 aa24.22■■□□□ 1.47
HDAC7-204ENST00000417107 NUDCQ9Y266 331 aa24.22■■□□□ 1.47
HDAC7-204ENST00000417107 KDRP35968 1356 aa24.21■■□□□ 1.47
HDAC7-204ENST00000417107 GNPATO15228 680 aa24.21■■□□□ 1.47
HDAC7-204ENST00000417107 HMOX1P09601 288 aa24.21■■□□□ 1.47
HDAC7-204ENST00000417107 SLC4A9Q96Q91 983 aa24.21■■□□□ 1.47
HDAC7-204ENST00000417107 RBM42Q9BTD8 480 aaKnown RBP24.21■■□□□ 1.47
HDAC7-204ENST00000417107 UBR3Q6ZT12 1888 aa24.19■■□□□ 1.46
HDAC7-204ENST00000417107 SSFA2P28290 1259 aa24.19■■□□□ 1.46
HDAC7-204ENST00000417107 COL3A1P02461 1466 aaPredicted RBP24.17■■□□□ 1.46
HDAC7-204ENST00000417107 GOLGB1Q14789 3259 aaKnown RBP24.16■■□□□ 1.46
HDAC7-204ENST00000417107 NFATC2IPQ8NCF5 419 aa24.16■■□□□ 1.46
HDAC7-204ENST00000417107 PTCD1O75127 700 aaKnown RBP24.14■■□□□ 1.45
HDAC7-204ENST00000417107 ZNF784Q8NCA9 323 aaPredicted RBP24.14■■□□□ 1.45
HDAC7-204ENST00000417107 YBX3P16989 372 aaKnown RBP eCLIP24.13■■□□□ 1.45
HDAC7-204ENST00000417107 U2AF1L5P0DN76 240 aaPredicted RBP24.12■■□□□ 1.45
HDAC7-204ENST00000417107 U2AF1Q01081 240 aaKnown RBP eCLIP24.12■■□□□ 1.45
HDAC7-204ENST00000417107 AKAP4Q5JQC9 854 aa24.12■■□□□ 1.45
HDAC7-204ENST00000417107 CD2APQ9Y5K6 639 aa24.12■■□□□ 1.45
HDAC7-204ENST00000417107 LGR6Q9HBX8 967 aa24.11■■□□□ 1.45
HDAC7-204ENST00000417107 RTCBQ9Y3I0 505 aaKnown RBP24.11■■□□□ 1.45
HDAC7-204ENST00000417107 MYBBP1AQ9BQG0 1328 aaKnown RBP24.1■■□□□ 1.45
HDAC7-204ENST00000417107 PRKRIP1Q9H875 184 aaPredicted RBP24.1■■□□□ 1.45
HDAC7-204ENST00000417107 FCHSD2O94868 740 aa24.09■■□□□ 1.45
HDAC7-204ENST00000417107 TRAPPC3LQ5T215 181 aa24.09■■□□□ 1.45
HDAC7-204ENST00000417107 RC3H1Q5TC82 1133 aaKnown RBP24.09■■□□□ 1.45
HDAC7-204ENST00000417107 MTHFSDQ2M296 383 aaKnown RBP24.08■■□□□ 1.45
HDAC7-204ENST00000417107 ZNF831Q5JPB2 1677 aa24.08■■□□□ 1.44
HDAC7-204ENST00000417107 CNTNAP4Q9C0A0 1308 aa24.08■■□□□ 1.44
HDAC7-204ENST00000417107 ARHGEF1Q92888 912 aaKnown RBP24.07■■□□□ 1.44
HDAC7-204ENST00000417107 RSPH6AQ9H0K4 717 aa24.07■■□□□ 1.44
HDAC7-204ENST00000417107 CHD4Q14839 1912 aa24.07■■□□□ 1.44
HDAC7-204ENST00000417107 RNMTO43148 476 aaKnown RBP24.06■■□□□ 1.44
HDAC7-204ENST00000417107 RPS6KA4O75676 772 aa24.06■■□□□ 1.44
HDAC7-204ENST00000417107 MMP10P09238 476 aa24.06■■□□□ 1.44
HDAC7-204ENST00000417107 PRKAR2BP31323 418 aa24.06■■□□□ 1.44
HDAC7-204ENST00000417107 SLC52A2Q9HAB3 445 aa24.06■■□□□ 1.44
HDAC7-204ENST00000417107 WWC3Q9ULE0 1092 aa24.06■■□□□ 1.44
HDAC7-204ENST00000417107 COL5A3P25940 1745 aaPredicted RBP24.06■■□□□ 1.44
HDAC7-204ENST00000417107 SCN11AQ9UI33 1791 aa24.06■■□□□ 1.44
HDAC7-204ENST00000417107 GRIN3BO60391 1043 aa24.04■■□□□ 1.44
HDAC7-204ENST00000417107 CRKLP46109 303 aaKnown RBP24.04■■□□□ 1.44
HDAC7-204ENST00000417107 GAS2L2Q8NHY3 880 aa24.04■■□□□ 1.44
HDAC7-204ENST00000417107 ADRA2BP18089 450 aa24.03■■□□□ 1.44
HDAC7-204ENST00000417107 RFC4P35249 363 aa24.03■■□□□ 1.44
HDAC7-204ENST00000417107 SLC39A6Q13433 755 aa24.03■■□□□ 1.44
HDAC7-204ENST00000417107 PHACTR3Q96KR7 559 aa24.03■■□□□ 1.44
HDAC7-204ENST00000417107 GYS1P13807 737 aa24.01■■□□□ 1.43
HDAC7-204ENST00000417107 NLGN1Q8N2Q7 840 aa24.01■■□□□ 1.43
HDAC7-204ENST00000417107 PNNQ9H307 717 aaKnown RBP24.01■■□□□ 1.43
HDAC7-204ENST00000417107 TJP1Q07157 1748 aa24.01■■□□□ 1.43
HDAC7-204ENST00000417107 MYH14Q7Z406 1995 aaKnown RBP24■■□□□ 1.43
HDAC7-204ENST00000417107 DNAJC10Q8IXB1 793 aa24■■□□□ 1.43
HDAC7-204ENST00000417107 MRC1P22897 1456 aa24■■□□□ 1.43
HDAC7-204ENST00000417107 NEFMP07197 916 aa23.99■■□□□ 1.43
HDAC7-204ENST00000417107 INTS5Q6P9B9 1019 aaKnown RBP23.99■■□□□ 1.43
HDAC7-204ENST00000417107 SRP68Q9UHB9 627 aaKnown RBP23.99■■□□□ 1.43
HDAC7-204ENST00000417107 GNAT3A8MTJ3 354 aa23.98■■□□□ 1.43
HDAC7-204ENST00000417107 CICQ96RK0 1608 aaPredicted RBP23.96■■□□□ 1.43
HDAC7-204ENST00000417107 ANP32CO43423 234 aa23.96■■□□□ 1.43
HDAC7-204ENST00000417107 ADAMTS7Q9UKP4 1686 aa23.95■■□□□ 1.43
HDAC7-204ENST00000417107 CCDC87Q9NVE4 849 aa23.95■■□□□ 1.42
HDAC7-204ENST00000417107 C4AP0C0L4 1744 aa23.95■■□□□ 1.42
HDAC7-204ENST00000417107 KCPQ6ZWJ8 1503 aa23.94■■□□□ 1.42
HDAC7-204ENST00000417107 CYP19A1P11511 503 aaPredicted RBP23.94■■□□□ 1.42
HDAC7-204ENST00000417107 USP42Q9H9J4 1324 aaKnown RBP23.93■■□□□ 1.42
HDAC7-204ENST00000417107 FKBP8Q14318 412 aa23.93■■□□□ 1.42
HDAC7-204ENST00000417107 IL17REQ8NFR9 667 aa23.93■■□□□ 1.42
HDAC7-204ENST00000417107 PLEKHF1Q96S99 279 aa23.93■■□□□ 1.42
HDAC7-204ENST00000417107 PARP3Q9Y6F1 533 aa23.93■■□□□ 1.42
HDAC7-204ENST00000417107 PXDNLA1KZ92 1463 aa23.93■■□□□ 1.42
HDAC7-204ENST00000417107 VIRMAQ69YN4 1812 aaKnown RBP23.92■■□□□ 1.42
HDAC7-204ENST00000417107 A0A0G2JLW4 131 aa23.92■■□□□ 1.42
HDAC7-204ENST00000417107 WDR43Q15061 677 aaKnown RBP eCLIP23.92■■□□□ 1.42
HDAC7-204ENST00000417107 C10orf71Q711Q0 1435 aa23.92■■□□□ 1.42
HDAC7-204ENST00000417107 TEFQ10587 303 aa23.9■■□□□ 1.42
HDAC7-204ENST00000417107 RTF1Q92541 710 aaKnown RBP23.9■■□□□ 1.42
HDAC7-204ENST00000417107 SOS1Q07889 1333 aaPredicted RBP23.89■■□□□ 1.42
HDAC7-204ENST00000417107 HTATSF1O43719 755 aaKnown RBP23.89■■□□□ 1.41
HDAC7-204ENST00000417107 TGFB2P61812 414 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms