RNA–Protein interactions for RNA: ENST00000416279.1

LINC01946-201, Transcript of long intergenic non-protein coding RNA 1946, humanhuman

TSL 5 BASIC

Gene LINC01946, Length 418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01946-201ENST00000416279 KDM6AO15550 1401 aaPredicted RBP13.14□□□□□ -0.31
LINC01946-201ENST00000416279 DDX10Q13206 875 aaKnown RBP13.14□□□□□ -0.31
LINC01946-201ENST00000416279 SLC4A9Q96Q91 983 aa13.14□□□□□ -0.31
LINC01946-201ENST00000416279 SYT17Q9BSW7 474 aa13.14□□□□□ -0.31
LINC01946-201ENST00000416279 KDRP35968 1356 aa13.14□□□□□ -0.31
LINC01946-201ENST00000416279 PLEKHG2Q9H7P9 1386 aa13.14□□□□□ -0.31
LINC01946-201ENST00000416279 UBR3Q6ZT12 1888 aa13.13□□□□□ -0.31
LINC01946-201ENST00000416279 ITPK1Q13572 414 aa13.13□□□□□ -0.31
LINC01946-201ENST00000416279 IFNL2Q8IZJ0 200 aa13.13□□□□□ -0.31
LINC01946-201ENST00000416279 ATG3Q9NT62 314 aa13.13□□□□□ -0.31
LINC01946-201ENST00000416279 PPP1R1BQ9UD71 204 aaPredicted RBP13.13□□□□□ -0.31
LINC01946-201ENST00000416279 MTHFSP49914 203 aa13.12□□□□□ -0.31
LINC01946-201ENST00000416279 SLC16A10Q8TF71 515 aa13.12□□□□□ -0.31
LINC01946-201ENST00000416279 ARXQ96QS3 562 aa13.12□□□□□ -0.31
LINC01946-201ENST00000416279 TFCP2L1Q9NZI6 479 aa13.12□□□□□ -0.31
LINC01946-201ENST00000416279 C4BP0C0L5 1744 aa13.12□□□□□ -0.31
LINC01946-201ENST00000416279 COL3A1P02461 1466 aaPredicted RBP13.11□□□□□ -0.31
LINC01946-201ENST00000416279 MAP3K5Q99683 1374 aa13.11□□□□□ -0.31
LINC01946-201ENST00000416279 LINC00116Q8NCU8 138 aa13.11□□□□□ -0.31
LINC01946-201ENST00000416279 SULT6B1Q6IMI4 303 aa13.1□□□□□ -0.31
LINC01946-201ENST00000416279 LOC102724428A0A0B4J2F2 783 aa13.09□□□□□ -0.31
LINC01946-201ENST00000416279 SIK1P57059 783 aa13.09□□□□□ -0.31
LINC01946-201ENST00000416279 CC2D1BQ5T0F9 858 aaKnown RBP13.09□□□□□ -0.31
LINC01946-201ENST00000416279 SMARCC1Q92922 1105 aaPredicted RBP13.09□□□□□ -0.31
LINC01946-201ENST00000416279 MYH14Q7Z406 1995 aaKnown RBP13.09□□□□□ -0.31
LINC01946-201ENST00000416279 ERVV-2B6SEH9 535 aa13.08□□□□□ -0.32
LINC01946-201ENST00000416279 PLEKHO1Q53GL0 409 aaPredicted RBP13.08□□□□□ -0.32
LINC01946-201ENST00000416279 ZNF530Q6P9A1 599 aaPredicted RBP13.08□□□□□ -0.32
LINC01946-201ENST00000416279 TMOD3Q9NYL9 352 aa13.08□□□□□ -0.32
LINC01946-201ENST00000416279 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.32
LINC01946-201ENST00000416279 SCN11AQ9UI33 1791 aa13.07□□□□□ -0.32
LINC01946-201ENST00000416279 MSL1Q68DK7 614 aa13.07□□□□□ -0.32
LINC01946-201ENST00000416279 NLGN2Q8NFZ4 835 aa13.07□□□□□ -0.32
LINC01946-201ENST00000416279 DCAF5Q96JK2 942 aa13.07□□□□□ -0.32
LINC01946-201ENST00000416279 ADAMTS7Q9UKP4 1686 aa13.06□□□□□ -0.32
LINC01946-201ENST00000416279 COL5A3P25940 1745 aaPredicted RBP13.06□□□□□ -0.32
LINC01946-201ENST00000416279 AMOTQ4VCS5 1084 aa13.06□□□□□ -0.32
LINC01946-201ENST00000416279 LGR6Q9HBX8 967 aa13.06□□□□□ -0.32
LINC01946-201ENST00000416279 VIRMAQ69YN4 1812 aaKnown RBP13.05□□□□□ -0.32
LINC01946-201ENST00000416279 HMOX1P09601 288 aa13.05□□□□□ -0.32
LINC01946-201ENST00000416279 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.04□□□□□ -0.32
LINC01946-201ENST00000416279 NFATC2IPQ8NCF5 419 aa13.04□□□□□ -0.32
LINC01946-201ENST00000416279 ATP6V1AP38606 617 aa13.03□□□□□ -0.32
LINC01946-201ENST00000416279 MTHFSDQ2M296 383 aaKnown RBP13.03□□□□□ -0.32
LINC01946-201ENST00000416279 TJP1Q07157 1748 aa13.02□□□□□ -0.32
LINC01946-201ENST00000416279 HSP90AB1P08238 724 aaKnown RBP13.02□□□□□ -0.33
LINC01946-201ENST00000416279 CNGB1Q14028 1251 aaPredicted RBP13.02□□□□□ -0.33
LINC01946-201ENST00000416279 MRC1P22897 1456 aa13.02□□□□□ -0.33
LINC01946-201ENST00000416279 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
LINC01946-201ENST00000416279 DIAPH1O60610 1272 aaKnown RBP13.01□□□□□ -0.33
LINC01946-201ENST00000416279 PHF14O94880 888 aa13.01□□□□□ -0.33
LINC01946-201ENST00000416279 YY1P25490 414 aa13.01□□□□□ -0.33
LINC01946-201ENST00000416279 SSFA2P28290 1259 aa13.01□□□□□ -0.33
LINC01946-201ENST00000416279 CABP4P57796 275 aa13.01□□□□□ -0.33
LINC01946-201ENST00000416279 AKAP4Q5JQC9 854 aa13.01□□□□□ -0.33
LINC01946-201ENST00000416279 FLAD1Q8NFF5 587 aa13.01□□□□□ -0.33
LINC01946-201ENST00000416279 AK7Q96M32 723 aa13.01□□□□□ -0.33
LINC01946-201ENST00000416279 CICQ96RK0 1608 aaPredicted RBP13.01□□□□□ -0.33
LINC01946-201ENST00000416279 CHD4Q14839 1912 aa13□□□□□ -0.33
LINC01946-201ENST00000416279 YBX3P16989 372 aaKnown RBP eCLIP13□□□□□ -0.33
LINC01946-201ENST00000416279 POLD1P28340 1107 aa13□□□□□ -0.33
LINC01946-201ENST00000416279 RC3H1Q5TC82 1133 aaKnown RBP13□□□□□ -0.33
LINC01946-201ENST00000416279 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
LINC01946-201ENST00000416279 SLC52A2Q9HAB3 445 aa13□□□□□ -0.33
LINC01946-201ENST00000416279 KCPQ6ZWJ8 1503 aa12.99□□□□□ -0.33
LINC01946-201ENST00000416279 GNPATO15228 680 aa12.99□□□□□ -0.33
LINC01946-201ENST00000416279 PTCD1O75127 700 aaKnown RBP12.99□□□□□ -0.33
LINC01946-201ENST00000416279 PPP2R1AP30153 589 aa12.99□□□□□ -0.33
LINC01946-201ENST00000416279 DSG3P32926 999 aa12.99□□□□□ -0.33
LINC01946-201ENST00000416279 RALBP1Q15311 655 aa12.99□□□□□ -0.33
LINC01946-201ENST00000416279 C1orf141Q5JVX7 400 aa12.99□□□□□ -0.33
LINC01946-201ENST00000416279 PHACTR3Q96KR7 559 aa12.99□□□□□ -0.33
LINC01946-201ENST00000416279 PRKRIP1Q9H875 184 aaPredicted RBP12.99□□□□□ -0.33
LINC01946-201ENST00000416279 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
LINC01946-201ENST00000416279 CNTNAP4Q9C0A0 1308 aa12.98□□□□□ -0.33
LINC01946-201ENST00000416279 SLC39A6Q13433 755 aa12.98□□□□□ -0.33
LINC01946-201ENST00000416279 INTS5Q6P9B9 1019 aaKnown RBP12.98□□□□□ -0.33
LINC01946-201ENST00000416279 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
LINC01946-201ENST00000416279 ARHGEF1Q92888 912 aaKnown RBP12.98□□□□□ -0.33
LINC01946-201ENST00000416279 C4AP0C0L4 1744 aa12.98□□□□□ -0.33
LINC01946-201ENST00000416279 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
LINC01946-201ENST00000416279 RPS6KA4O75676 772 aa12.97□□□□□ -0.33
LINC01946-201ENST00000416279 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
LINC01946-201ENST00000416279 GYS1P13807 737 aa12.96□□□□□ -0.33
LINC01946-201ENST00000416279 CRKLP46109 303 aaKnown RBP12.96□□□□□ -0.33
LINC01946-201ENST00000416279 KLHL34Q8N239 644 aa12.96□□□□□ -0.33
LINC01946-201ENST00000416279 RSPH6AQ9H0K4 717 aa12.96□□□□□ -0.33
LINC01946-201ENST00000416279 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.33
LINC01946-201ENST00000416279 KIF13BQ9NQT8 1826 aa12.96□□□□□ -0.33
LINC01946-201ENST00000416279 ABCB7O75027 752 aa12.95□□□□□ -0.34
LINC01946-201ENST00000416279 DNAJC10Q8IXB1 793 aa12.95□□□□□ -0.34
LINC01946-201ENST00000416279 MYBBP1AQ9BQG0 1328 aaKnown RBP12.94□□□□□ -0.34
LINC01946-201ENST00000416279 U2SURPO15042 1029 aaKnown RBP12.94□□□□□ -0.34
LINC01946-201ENST00000416279 MMP10P09238 476 aa12.94□□□□□ -0.34
LINC01946-201ENST00000416279 CYP19A1P11511 503 aaPredicted RBP12.94□□□□□ -0.34
LINC01946-201ENST00000416279 POLA2Q14181 598 aa12.94□□□□□ -0.34
LINC01946-201ENST00000416279 ZNF784Q8NCA9 323 aaPredicted RBP12.94□□□□□ -0.34
LINC01946-201ENST00000416279 SRP68Q9UHB9 627 aaKnown RBP12.94□□□□□ -0.34
LINC01946-201ENST00000416279 RTCBQ9Y3I0 505 aaKnown RBP12.94□□□□□ -0.34
LINC01946-201ENST00000416279 CEMIPQ8WUJ3 1361 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms