RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 C20orf194Q5TEA3 1177 aa10.97□□□□□ -0.65
MECP2-204ENST00000415944 CDCA7Q9BWT1 371 aaPredicted RBP10.97□□□□□ -0.65
MECP2-204ENST00000415944 API5Q9BZZ5 524 aaKnown RBP10.97□□□□□ -0.65
MECP2-204ENST00000415944 UPF2Q9HAU5 1272 aaKnown RBP10.97□□□□□ -0.65
MECP2-204ENST00000415944 USP35Q9P2H5 1018 aa10.97□□□□□ -0.65
MECP2-204ENST00000415944 TNS2Q63HR2 1409 aa10.97□□□□□ -0.65
MECP2-204ENST00000415944 ZNF853P0CG23 659 aa10.96□□□□□ -0.65
MECP2-204ENST00000415944 FAM98CQ17RN3 349 aaKnown RBP10.96□□□□□ -0.65
MECP2-204ENST00000415944 USHBP1Q8N6Y0 703 aa10.96□□□□□ -0.65
MECP2-204ENST00000415944 RRP7AQ9Y3A4 280 aaKnown RBP10.96□□□□□ -0.65
MECP2-204ENST00000415944 IL2RBP14784 551 aa10.95□□□□□ -0.66
MECP2-204ENST00000415944 EXOSC9Q06265 439 aaKnown RBP10.95□□□□□ -0.66
MECP2-204ENST00000415944 GAS2L2Q8NHY3 880 aa10.95□□□□□ -0.66
MECP2-204ENST00000415944 FRAT1Q92837 279 aaPredicted RBP10.95□□□□□ -0.66
MECP2-204ENST00000415944 DAXXQ9UER7 740 aaPredicted RBP10.95□□□□□ -0.66
MECP2-204ENST00000415944 AEBP1Q8IUX7 1158 aa10.94□□□□□ -0.66
MECP2-204ENST00000415944 SEPT12Q8IYM1 358 aa10.94□□□□□ -0.66
MECP2-204ENST00000415944 VIRMAQ69YN4 1812 aaKnown RBP10.93□□□□□ -0.66
MECP2-204ENST00000415944 SENP3-EIF4A1A0A087X0R7 540 aa10.93□□□□□ -0.66
MECP2-204ENST00000415944 SULT6B1Q6IMI4 303 aa10.93□□□□□ -0.66
MECP2-204ENST00000415944 RAPGEF4Q8WZA2 1011 aa10.93□□□□□ -0.66
MECP2-204ENST00000415944 COG6Q9Y2V7 657 aa10.93□□□□□ -0.66
MECP2-204ENST00000415944 SBF2Q86WG5 1849 aa10.93□□□□□ -0.66
MECP2-204ENST00000415944 TATP17735 454 aaPredicted RBP10.92□□□□□ -0.66
MECP2-204ENST00000415944 SSH1Q8WYL5 1049 aa10.92□□□□□ -0.66
MECP2-204ENST00000415944 GCC1Q96CN9 775 aa10.92□□□□□ -0.66
MECP2-204ENST00000415944 PTPRCP08575 1304 aa10.91□□□□□ -0.66
MECP2-204ENST00000415944 HMOX1P09601 288 aa10.91□□□□□ -0.66
MECP2-204ENST00000415944 TRIM27P14373 513 aa10.91□□□□□ -0.66
MECP2-204ENST00000415944 DDB1Q16531 1140 aa10.91□□□□□ -0.66
MECP2-204ENST00000415944 PANK1Q8TE04 598 aa10.91□□□□□ -0.66
MECP2-204ENST00000415944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.91□□□□□ -0.66
MECP2-204ENST00000415944 DLG5Q8TDM6 1919 aa10.91□□□□□ -0.66
MECP2-204ENST00000415944 BCL9O00512 1426 aa10.91□□□□□ -0.66
MECP2-204ENST00000415944 KAT6BQ8WYB5 2073 aa10.9□□□□□ -0.66
MECP2-204ENST00000415944 ADAMTS7Q9UKP4 1686 aa10.9□□□□□ -0.66
MECP2-204ENST00000415944 A0A0G2JS52 829 aa10.9□□□□□ -0.66
MECP2-204ENST00000415944 VAMP4O75379 141 aa10.9□□□□□ -0.66
MECP2-204ENST00000415944 BECN1Q14457 450 aa10.9□□□□□ -0.66
MECP2-204ENST00000415944 IL27Q8NEV9 243 aa10.9□□□□□ -0.66
MECP2-204ENST00000415944 ZCRB1Q8TBF4 217 aaKnown RBP10.9□□□□□ -0.66
MECP2-204ENST00000415944 RTF1Q92541 710 aaKnown RBP10.9□□□□□ -0.66
MECP2-204ENST00000415944 EP400Q96L91 3159 aa10.9□□□□□ -0.66
MECP2-204ENST00000415944 TOGARAM1Q9Y4F4 1720 aa10.89□□□□□ -0.67
MECP2-204ENST00000415944 PCDH11XQ9BZA7 1347 aa10.89□□□□□ -0.67
MECP2-204ENST00000415944 PCDH11YQ9BZA8 1340 aa10.89□□□□□ -0.67
MECP2-204ENST00000415944 EXOC5O00471 708 aa10.89□□□□□ -0.67
MECP2-204ENST00000415944 CHL1O00533 1208 aa10.89□□□□□ -0.67
MECP2-204ENST00000415944 AMOTQ4VCS5 1084 aa10.89□□□□□ -0.67
MECP2-204ENST00000415944 KRT27Q7Z3Y8 459 aa10.89□□□□□ -0.67
MECP2-204ENST00000415944 SMC5Q8IY18 1101 aa10.89□□□□□ -0.67
MECP2-204ENST00000415944 ZBTB40Q9NUA8 1239 aa10.89□□□□□ -0.67
MECP2-204ENST00000415944 SCN11AQ9UI33 1791 aa10.89□□□□□ -0.67
MECP2-204ENST00000415944 DOT1LQ8TEK3 1739 aa10.89□□□□□ -0.67
MECP2-204ENST00000415944 TWISTNBQ3B726 338 aaPredicted RBP10.88□□□□□ -0.67
MECP2-204ENST00000415944 ITPRIPQ8IWB1 547 aa10.88□□□□□ -0.67
MECP2-204ENST00000415944 MARCH10Q8NA82 808 aaPredicted RBP10.88□□□□□ -0.67
MECP2-204ENST00000415944 NOB1Q9ULX3 412 aaKnown RBP10.88□□□□□ -0.67
MECP2-204ENST00000415944 SPG7Q9UQ90 795 aa10.88□□□□□ -0.67
MECP2-204ENST00000415944 ITGB4P16144 1822 aa10.88□□□□□ -0.67
MECP2-204ENST00000415944 NHSQ6T4R5 1651 aa10.88□□□□□ -0.67
MECP2-204ENST00000415944 ABCC4O15439 1325 aa10.87□□□□□ -0.67
MECP2-204ENST00000415944 CYP27B1O15528 508 aa10.87□□□□□ -0.67
MECP2-204ENST00000415944 MSH5O43196 834 aa10.87□□□□□ -0.67
MECP2-204ENST00000415944 C8orf34Q49A92 452 aa10.87□□□□□ -0.67
MECP2-204ENST00000415944 PLEKHO1Q53GL0 409 aaPredicted RBP10.87□□□□□ -0.67
MECP2-204ENST00000415944 ILDR2Q71H61 639 aa10.87□□□□□ -0.67
MECP2-204ENST00000415944 TSR2Q969E8 191 aaKnown RBP10.87□□□□□ -0.67
MECP2-204ENST00000415944 TNS1Q9HBL0 1735 aaKnown RBP10.87□□□□□ -0.67
MECP2-204ENST00000415944 IGHDP01880 384 aa10.86□□□□□ -0.67
MECP2-204ENST00000415944 RTL5Q5HYW3 569 aaPredicted RBP10.86□□□□□ -0.67
MECP2-204ENST00000415944 MRPL50Q8N5N7 158 aaKnown RBP10.86□□□□□ -0.67
MECP2-204ENST00000415944 PHACTR3Q96KR7 559 aa10.86□□□□□ -0.67
MECP2-204ENST00000415944 MBIPQ9NS73 344 aa10.86□□□□□ -0.67
MECP2-204ENST00000415944 HOXB7P09629 217 aa10.85□□□□□ -0.67
MECP2-204ENST00000415944 RLBP1P12271 317 aa10.85□□□□□ -0.67
MECP2-204ENST00000415944 PHKG2P15735 406 aa10.85□□□□□ -0.67
MECP2-204ENST00000415944 NKX1-1Q15270 411 aaPredicted RBP10.85□□□□□ -0.67
MECP2-204ENST00000415944 MTHFSDQ2M296 383 aaKnown RBP10.85□□□□□ -0.67
MECP2-204ENST00000415944 INTS3Q68E01 1043 aaKnown RBP10.85□□□□□ -0.67
MECP2-204ENST00000415944 ZNF530Q6P9A1 599 aaPredicted RBP10.85□□□□□ -0.67
MECP2-204ENST00000415944 RPAP2Q8IXW5 612 aaPredicted RBP10.85□□□□□ -0.67
MECP2-204ENST00000415944 IFNL2Q8IZJ0 200 aa10.85□□□□□ -0.67
MECP2-204ENST00000415944 HDAC5Q9UQL6 1122 aa10.85□□□□□ -0.67
MECP2-204ENST00000415944 PCDHB15Q9Y5E8 787 aa10.85□□□□□ -0.67
MECP2-204ENST00000415944 MRC1P22897 1456 aa10.85□□□□□ -0.67
MECP2-204ENST00000415944 SIPA1L3O60292 1781 aaPredicted RBP10.85□□□□□ -0.67
MECP2-204ENST00000415944 KDM6AO15550 1401 aaPredicted RBP10.84□□□□□ -0.67
MECP2-204ENST00000415944 BTAF1O14981 1849 aa10.84□□□□□ -0.67
MECP2-204ENST00000415944 RGS3P49796 1198 aa10.84□□□□□ -0.67
MECP2-204ENST00000415944 FAM196AQ6ZSG2 479 aa10.84□□□□□ -0.67
MECP2-204ENST00000415944 DDX54Q8TDD1 881 aaKnown RBP10.84□□□□□ -0.67
MECP2-204ENST00000415944 CACNA1FO60840 1977 aa10.84□□□□□ -0.67
MECP2-204ENST00000415944 RGPD3A6NKT7 1758 aaPredicted RBP10.83□□□□□ -0.68
MECP2-204ENST00000415944 RGPD4Q7Z3J3 1758 aa10.83□□□□□ -0.68
MECP2-204ENST00000415944 MAP3K5Q99683 1374 aa10.83□□□□□ -0.68
MECP2-204ENST00000415944 HMMRO75330 724 aa10.83□□□□□ -0.68
MECP2-204ENST00000415944 AKAP4Q5JQC9 854 aa10.83□□□□□ -0.68
MECP2-204ENST00000415944 FAM182BQ5T319 152 aa10.83□□□□□ -0.68
MECP2-204ENST00000415944 TMEM57Q8N5G2 664 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 867.8 ms