RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 BARGINQ6ZT62 677 aa18.29■□□□□ 0.52
HMGA1P1-201ENST00000415560 FRAT1Q92837 279 aaPredicted RBP18.29■□□□□ 0.52
HMGA1P1-201ENST00000415560 SLC52A2Q9HAB3 445 aa18.29■□□□□ 0.52
HMGA1P1-201ENST00000415560 USP21Q9UK80 565 aa18.29■□□□□ 0.52
HMGA1P1-201ENST00000415560 ERVV-2B6SEH9 535 aa18.28■□□□□ 0.52
HMGA1P1-201ENST00000415560 PLIN1O60240 522 aa18.28■□□□□ 0.52
HMGA1P1-201ENST00000415560 TSPYL6Q8N831 410 aa18.28■□□□□ 0.52
HMGA1P1-201ENST00000415560 SSH1Q8WYL5 1049 aa18.28■□□□□ 0.52
HMGA1P1-201ENST00000415560 DISP2A7MBM2 1401 aa18.27■□□□□ 0.52
HMGA1P1-201ENST00000415560 BRPF1P55201 1214 aaPredicted RBP18.27■□□□□ 0.52
HMGA1P1-201ENST00000415560 PDE3AQ14432 1141 aa18.27■□□□□ 0.52
HMGA1P1-201ENST00000415560 ZKSCAN2Q63HK3 967 aa18.27■□□□□ 0.52
HMGA1P1-201ENST00000415560 WNK3Q9BYP7 1800 aa18.27■□□□□ 0.52
HMGA1P1-201ENST00000415560 KIF16BQ96L93 1317 aa18.26■□□□□ 0.51
HMGA1P1-201ENST00000415560 DDB1Q16531 1140 aa18.26■□□□□ 0.51
HMGA1P1-201ENST00000415560 NFATC2IPQ8NCF5 419 aa18.26■□□□□ 0.51
HMGA1P1-201ENST00000415560 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.26■□□□□ 0.51
HMGA1P1-201ENST00000415560 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
HMGA1P1-201ENST00000415560 LRP6O75581 1613 aa18.25■□□□□ 0.51
HMGA1P1-201ENST00000415560 BCL2L13Q9BXK5 485 aa18.25■□□□□ 0.51
HMGA1P1-201ENST00000415560 BCL9LQ86UU0 1499 aa18.25■□□□□ 0.51
HMGA1P1-201ENST00000415560 KDM3BQ7LBC6 1761 aa18.25■□□□□ 0.51
HMGA1P1-201ENST00000415560 KDM6AO15550 1401 aaPredicted RBP18.24■□□□□ 0.51
HMGA1P1-201ENST00000415560 HOXB7P09629 217 aa18.24■□□□□ 0.51
HMGA1P1-201ENST00000415560 EIF4A1P60842 406 aaKnown RBP18.24■□□□□ 0.51
HMGA1P1-201ENST00000415560 CCDC30Q5VVM6 783 aa18.24■□□□□ 0.51
HMGA1P1-201ENST00000415560 TTC5Q8N0Z6 440 aa18.24■□□□□ 0.51
HMGA1P1-201ENST00000415560 STK31Q9BXU1 1019 aa18.24■□□□□ 0.51
HMGA1P1-201ENST00000415560 PPP4R2Q9NY27 417 aa18.24■□□□□ 0.51
HMGA1P1-201ENST00000415560 MRPL50Q8N5N7 158 aaKnown RBP18.23■□□□□ 0.51
HMGA1P1-201ENST00000415560 ARHGAP45Q92619 1136 aa18.23■□□□□ 0.51
HMGA1P1-201ENST00000415560 SHANK3Q9BYB0 1731 aa18.23■□□□□ 0.51
HMGA1P1-201ENST00000415560 NOB1Q9ULX3 412 aaKnown RBP18.22■□□□□ 0.51
HMGA1P1-201ENST00000415560 MRC1P22897 1456 aa18.21■□□□□ 0.51
HMGA1P1-201ENST00000415560 CACNA1FO60840 1977 aa18.21■□□□□ 0.51
HMGA1P1-201ENST00000415560 KRT24Q2M2I5 525 aa18.21■□□□□ 0.51
HMGA1P1-201ENST00000415560 ZNF790Q6PG37 636 aa18.21■□□□□ 0.51
HMGA1P1-201ENST00000415560 TRPC5Q9UL62 973 aaPredicted RBP18.21■□□□□ 0.51
HMGA1P1-201ENST00000415560 AFF2P51816 1311 aa18.21■□□□□ 0.51
HMGA1P1-201ENST00000415560 ATF7IPQ6VMQ6 1270 aa18.2■□□□□ 0.5
HMGA1P1-201ENST00000415560 FTSJ3Q8IY81 847 aaKnown RBP18.2■□□□□ 0.5
HMGA1P1-201ENST00000415560 DZIP1LQ8IYY4 767 aaKnown RBP18.2■□□□□ 0.5
HMGA1P1-201ENST00000415560 TNS2Q63HR2 1409 aa18.2■□□□□ 0.5
HMGA1P1-201ENST00000415560 CRBNQ96SW2 442 aa18.19■□□□□ 0.5
HMGA1P1-201ENST00000415560 API5Q9BZZ5 524 aaKnown RBP18.19■□□□□ 0.5
HMGA1P1-201ENST00000415560 TMOD3Q9NYL9 352 aa18.19■□□□□ 0.5
HMGA1P1-201ENST00000415560 KCNQ3O43525 872 aa18.18■□□□□ 0.5
HMGA1P1-201ENST00000415560 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
HMGA1P1-201ENST00000415560 AAMPQ13685 434 aa18.18■□□□□ 0.5
HMGA1P1-201ENST00000415560 FAM98CQ17RN3 349 aaKnown RBP18.18■□□□□ 0.5
HMGA1P1-201ENST00000415560 HDGFL1Q5TGJ6 251 aa18.18■□□□□ 0.5
HMGA1P1-201ENST00000415560 EXOC6Q8TAG9 804 aa18.18■□□□□ 0.5
HMGA1P1-201ENST00000415560 FBXO41Q8TF61 875 aa18.18■□□□□ 0.5
HMGA1P1-201ENST00000415560 GJD4Q96KN9 370 aaPredicted RBP18.18■□□□□ 0.5
HMGA1P1-201ENST00000415560 FMNL2Q96PY5 1086 aa18.18■□□□□ 0.5
HMGA1P1-201ENST00000415560 A0A0G2JS52 829 aa18.17■□□□□ 0.5
HMGA1P1-201ENST00000415560 MYT1Q01538 1121 aa18.17■□□□□ 0.5
HMGA1P1-201ENST00000415560 C20orf194Q5TEA3 1177 aa18.17■□□□□ 0.5
HMGA1P1-201ENST00000415560 CHMP4BQ9H444 224 aaKnown RBP18.17■□□□□ 0.5
HMGA1P1-201ENST00000415560 TCERG1O14776 1098 aaKnown RBP18.16■□□□□ 0.5
HMGA1P1-201ENST00000415560 GIGYF1O75420 1035 aaPredicted RBP18.16■□□□□ 0.5
HMGA1P1-201ENST00000415560 EIF2S2P20042 333 aaKnown RBP18.16■□□□□ 0.5
HMGA1P1-201ENST00000415560 SLC39A6Q13433 755 aa18.16■□□□□ 0.5
HMGA1P1-201ENST00000415560 PTPRCP08575 1304 aa18.16■□□□□ 0.5
HMGA1P1-201ENST00000415560 SNRPA1P09661 255 aaKnown RBP18.15■□□□□ 0.5
HMGA1P1-201ENST00000415560 QTRT2Q9H974 415 aaKnown RBP18.15■□□□□ 0.5
HMGA1P1-201ENST00000415560 HEG1Q9ULI3 1381 aa18.15■□□□□ 0.5
HMGA1P1-201ENST00000415560 TRIM27P14373 513 aa18.14■□□□□ 0.49
HMGA1P1-201ENST00000415560 PANK1Q8TE04 598 aa18.14■□□□□ 0.49
HMGA1P1-201ENST00000415560 CLUAP1Q96AJ1 413 aa18.14■□□□□ 0.49
HMGA1P1-201ENST00000415560 KAT6BQ8WYB5 2073 aa18.13■□□□□ 0.49
HMGA1P1-201ENST00000415560 CCDC136Q96JN2 1154 aa18.13■□□□□ 0.49
HMGA1P1-201ENST00000415560 DBF4Q9UBU7 674 aaPredicted RBP18.13■□□□□ 0.49
HMGA1P1-201ENST00000415560 COG6Q9Y2V7 657 aa18.13■□□□□ 0.49
HMGA1P1-201ENST00000415560 ITGB4P16144 1822 aa18.13■□□□□ 0.49
HMGA1P1-201ENST00000415560 ATRNO75882 1429 aa18.13■□□□□ 0.49
HMGA1P1-201ENST00000415560 MVPQ14764 893 aaKnown RBP18.12■□□□□ 0.49
HMGA1P1-201ENST00000415560 ZNF772Q68DY9 489 aaPredicted RBP18.12■□□□□ 0.49
HMGA1P1-201ENST00000415560 MARCH10Q8NA82 808 aaPredicted RBP18.12■□□□□ 0.49
HMGA1P1-201ENST00000415560 NECTIN2Q92692 538 aa18.12■□□□□ 0.49
HMGA1P1-201ENST00000415560 ZNF496Q96IT1 587 aaPredicted RBP18.12■□□□□ 0.49
HMGA1P1-201ENST00000415560 DDX19BQ9UMR2 479 aa18.12■□□□□ 0.49
HMGA1P1-201ENST00000415560 SYTL4Q96C24 671 aaPredicted RBP18.11■□□□□ 0.49
HMGA1P1-201ENST00000415560 TEX13AQ9BXU3 409 aaPredicted RBP18.11■□□□□ 0.49
HMGA1P1-201ENST00000415560 TOGARAM1Q9Y4F4 1720 aa18.1■□□□□ 0.49
HMGA1P1-201ENST00000415560 ONECUT3O60422 494 aaPredicted RBP18.1■□□□□ 0.49
HMGA1P1-201ENST00000415560 PIGBQ92521 554 aa18.1■□□□□ 0.49
HMGA1P1-201ENST00000415560 PRIM1P49642 420 aaKnown RBP18.09■□□□□ 0.49
HMGA1P1-201ENST00000415560 ITPRIPQ8IWB1 547 aa18.09■□□□□ 0.49
HMGA1P1-201ENST00000415560 HYPKQ9NX55 129 aa18.09■□□□□ 0.49
HMGA1P1-201ENST00000415560 RLBP1P12271 317 aa18.08■□□□□ 0.48
HMGA1P1-201ENST00000415560 FLIIQ13045 1269 aa18.08■□□□□ 0.48
HMGA1P1-201ENST00000415560 VSIG10Q8N0Z9 540 aa18.08■□□□□ 0.48
HMGA1P1-201ENST00000415560 GLI3P10071 1580 aa18.08■□□□□ 0.48
HMGA1P1-201ENST00000415560 BCL9O00512 1426 aa18.07■□□□□ 0.48
HMGA1P1-201ENST00000415560 FKBP5Q13451 457 aaPredicted RBP18.07■□□□□ 0.48
HMGA1P1-201ENST00000415560 TMEM57Q8N5G2 664 aa18.07■□□□□ 0.48
HMGA1P1-201ENST00000415560 DDX21Q9NR30 783 aaKnown RBP eCLIP18.07■□□□□ 0.48
HMGA1P1-201ENST00000415560 CHPF2Q9P2E5 772 aa18.07■□□□□ 0.48
HMGA1P1-201ENST00000415560 TNNQ9UQP3 1299 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms