RNA–Protein interactions for RNA: ENST00000415495.5

CEACAM3-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 1 (best)

Gene CEACAM3, Length 1,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-203ENST00000415495 PDE3AQ14432 1141 aa27.53■■■□□ 2
CEACAM3-203ENST00000415495 MRPL50Q8N5N7 158 aaKnown RBP27.53■■■□□ 2
CEACAM3-203ENST00000415495 EXOC6Q8TAG9 804 aa27.53■■■□□ 2
CEACAM3-203ENST00000415495 FRAT1Q92837 279 aaPredicted RBP27.53■■■□□ 2
CEACAM3-203ENST00000415495 SLC52A2Q9HAB3 445 aa27.53■■■□□ 2
CEACAM3-203ENST00000415495 KDM3BQ7LBC6 1761 aa27.53■■■□□ 2
CEACAM3-203ENST00000415495 KCNQ3O43525 872 aa27.52■■■□□ 2
CEACAM3-203ENST00000415495 CRBNQ96SW2 442 aa27.52■■■□□ 2
CEACAM3-203ENST00000415495 PPP4R2Q9NY27 417 aa27.52■■■□□ 2
CEACAM3-203ENST00000415495 MRC1P22897 1456 aa27.52■■■□□ 2
CEACAM3-203ENST00000415495 EIF4A1P60842 406 aaKnown RBP27.51■■□□□ 1.99
CEACAM3-203ENST00000415495 DDX54Q8TDD1 881 aaKnown RBP27.51■■□□□ 1.99
CEACAM3-203ENST00000415495 SOS1Q07889 1333 aaPredicted RBP27.5■■□□□ 1.99
CEACAM3-203ENST00000415495 WNK3Q9BYP7 1800 aa27.5■■□□□ 1.99
CEACAM3-203ENST00000415495 NFATC2IPQ8NCF5 419 aa27.49■■□□□ 1.99
CEACAM3-203ENST00000415495 CDCA7Q9BWT1 371 aaPredicted RBP27.49■■□□□ 1.99
CEACAM3-203ENST00000415495 NOB1Q9ULX3 412 aaKnown RBP27.49■■□□□ 1.99
CEACAM3-203ENST00000415495 ZKSCAN2Q63HK3 967 aa27.49■■□□□ 1.99
CEACAM3-203ENST00000415495 TNNQ9UQP3 1299 aa27.49■■□□□ 1.99
CEACAM3-203ENST00000415495 TCERG1O14776 1098 aaKnown RBP27.48■■□□□ 1.99
CEACAM3-203ENST00000415495 CANXP27824 592 aaKnown RBP27.48■■□□□ 1.99
CEACAM3-203ENST00000415495 VPS72Q15906 364 aa27.48■■□□□ 1.99
CEACAM3-203ENST00000415495 BARGINQ6ZT62 677 aa27.48■■□□□ 1.99
CEACAM3-203ENST00000415495 KIF16BQ96L93 1317 aa27.47■■□□□ 1.99
CEACAM3-203ENST00000415495 HEG1Q9ULI3 1381 aa27.46■■□□□ 1.99
CEACAM3-203ENST00000415495 ERVV-2B6SEH9 535 aa27.45■■□□□ 1.99
CEACAM3-203ENST00000415495 EXOC5O00471 708 aa27.45■■□□□ 1.99
CEACAM3-203ENST00000415495 PANK1Q8TE04 598 aa27.45■■□□□ 1.99
CEACAM3-203ENST00000415495 RLBP1P12271 317 aa27.45■■□□□ 1.98
CEACAM3-203ENST00000415495 IPO8O15397 1037 aaKnown RBP27.44■■□□□ 1.98
CEACAM3-203ENST00000415495 TRIM27P14373 513 aa27.44■■□□□ 1.98
CEACAM3-203ENST00000415495 CABP4P57796 275 aa27.44■■□□□ 1.98
CEACAM3-203ENST00000415495 ATF7IPQ6VMQ6 1270 aa27.44■■□□□ 1.98
CEACAM3-203ENST00000415495 ARHGAP45Q92619 1136 aa27.43■■□□□ 1.98
CEACAM3-203ENST00000415495 USP21Q9UK80 565 aa27.43■■□□□ 1.98
CEACAM3-203ENST00000415495 CCDC9Q9Y3X0 531 aaKnown RBP27.43■■□□□ 1.98
CEACAM3-203ENST00000415495 HOXB7P09629 217 aa27.42■■□□□ 1.98
CEACAM3-203ENST00000415495 ZNF790Q6PG37 636 aa27.42■■□□□ 1.98
CEACAM3-203ENST00000415495 TNS2Q63HR2 1409 aa27.42■■□□□ 1.98
CEACAM3-203ENST00000415495 SLC39A6Q13433 755 aa27.41■■□□□ 1.98
CEACAM3-203ENST00000415495 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.41■■□□□ 1.98
CEACAM3-203ENST00000415495 DZIP1LQ8IYY4 767 aaKnown RBP27.41■■□□□ 1.98
CEACAM3-203ENST00000415495 MS4A1P11836 297 aa27.4■■□□□ 1.98
CEACAM3-203ENST00000415495 MEX3CQ5U5Q3 659 aaKnown RBP27.4■■□□□ 1.98
CEACAM3-203ENST00000415495 CLUAP1Q96AJ1 413 aa27.4■■□□□ 1.98
CEACAM3-203ENST00000415495 CCDC30Q5VVM6 783 aa27.39■■□□□ 1.98
CEACAM3-203ENST00000415495 COG6Q9Y2V7 657 aa27.39■■□□□ 1.98
CEACAM3-203ENST00000415495 GIGYF1O75420 1035 aaPredicted RBP27.38■■□□□ 1.97
CEACAM3-203ENST00000415495 SLC4A2P04920 1241 aa27.38■■□□□ 1.97
CEACAM3-203ENST00000415495 DDB1Q16531 1140 aa27.38■■□□□ 1.97
CEACAM3-203ENST00000415495 TOGARAM1Q9Y4F4 1720 aa27.37■■□□□ 1.97
CEACAM3-203ENST00000415495 B4GALNT3Q6L9W6 998 aa27.36■■□□□ 1.97
CEACAM3-203ENST00000415495 AFF2P51816 1311 aa27.35■■□□□ 1.97
CEACAM3-203ENST00000415495 HDGFL1Q5TGJ6 251 aa27.34■■□□□ 1.97
CEACAM3-203ENST00000415495 ZNF496Q96IT1 587 aaPredicted RBP27.34■■□□□ 1.97
CEACAM3-203ENST00000415495 FAM98CQ17RN3 349 aaKnown RBP27.34■■□□□ 1.97
CEACAM3-203ENST00000415495 FTSJ3Q8IY81 847 aaKnown RBP27.34■■□□□ 1.97
CEACAM3-203ENST00000415495 MVPQ14764 893 aaKnown RBP27.33■■□□□ 1.97
CEACAM3-203ENST00000415495 G2E3Q7L622 706 aa27.33■■□□□ 1.97
CEACAM3-203ENST00000415495 NECTIN2Q92692 538 aa27.33■■□□□ 1.97
CEACAM3-203ENST00000415495 STK31Q9BXU1 1019 aa27.33■■□□□ 1.97
CEACAM3-203ENST00000415495 PRAMEF22A3QJZ6 481 aa27.32■■□□□ 1.96
CEACAM3-203ENST00000415495 MARCH10Q8NA82 808 aaPredicted RBP27.32■■□□□ 1.96
CEACAM3-203ENST00000415495 CHMP4AQ9BY43 222 aa27.32■■□□□ 1.96
CEACAM3-203ENST00000415495 API5Q9BZZ5 524 aaKnown RBP27.32■■□□□ 1.96
CEACAM3-203ENST00000415495 TMEM57Q8N5G2 664 aa27.31■■□□□ 1.96
CEACAM3-203ENST00000415495 ABCC4O15439 1325 aa27.31■■□□□ 1.96
CEACAM3-203ENST00000415495 PTPRCP08575 1304 aa27.31■■□□□ 1.96
CEACAM3-203ENST00000415495 EIF2S2P20042 333 aaKnown RBP27.3■■□□□ 1.96
CEACAM3-203ENST00000415495 TTC5Q8N0Z6 440 aa27.3■■□□□ 1.96
CEACAM3-203ENST00000415495 RGS12O14924 1447 aa27.3■■□□□ 1.96
CEACAM3-203ENST00000415495 PIGBQ92521 554 aa27.3■■□□□ 1.96
CEACAM3-203ENST00000415495 CCDC136Q96JN2 1154 aa27.3■■□□□ 1.96
CEACAM3-203ENST00000415495 TMOD3Q9NYL9 352 aa27.3■■□□□ 1.96
CEACAM3-203ENST00000415495 ATRNO75882 1429 aa27.29■■□□□ 1.96
CEACAM3-203ENST00000415495 CACNA1FO60840 1977 aa27.29■■□□□ 1.96
CEACAM3-203ENST00000415495 PAPPAQ13219 1627 aa27.29■■□□□ 1.96
CEACAM3-203ENST00000415495 GJD4Q96KN9 370 aaPredicted RBP27.29■■□□□ 1.96
CEACAM3-203ENST00000415495 FMNL2Q96PY5 1086 aa27.29■■□□□ 1.96
CEACAM3-203ENST00000415495 GLI3P10071 1580 aa27.27■■□□□ 1.96
CEACAM3-203ENST00000415495 ITGB4P16144 1822 aa27.27■■□□□ 1.96
CEACAM3-203ENST00000415495 SNRPA1P09661 255 aaKnown RBP27.27■■□□□ 1.96
CEACAM3-203ENST00000415495 AAMPQ13685 434 aa27.27■■□□□ 1.96
CEACAM3-203ENST00000415495 TRPC5Q9UL62 973 aaPredicted RBP27.27■■□□□ 1.96
CEACAM3-203ENST00000415495 UBR2Q8IWV8 1755 aa27.26■■□□□ 1.95
CEACAM3-203ENST00000415495 BCL9O00512 1426 aa27.26■■□□□ 1.95
CEACAM3-203ENST00000415495 CHPF2Q9P2E5 772 aa27.26■■□□□ 1.95
CEACAM3-203ENST00000415495 KCPQ6ZWJ8 1503 aa27.26■■□□□ 1.95
CEACAM3-203ENST00000415495 FLIIQ13045 1269 aa27.25■■□□□ 1.95
CEACAM3-203ENST00000415495 C5P01031 1676 aa27.25■■□□□ 1.95
CEACAM3-203ENST00000415495 THSD7AQ9UPZ6 1657 aa27.25■■□□□ 1.95
CEACAM3-203ENST00000415495 ONECUT3O60422 494 aaPredicted RBP27.24■■□□□ 1.95
CEACAM3-203ENST00000415495 ITPRIPQ8IWB1 547 aa27.24■■□□□ 1.95
CEACAM3-203ENST00000415495 DDX19BQ9UMR2 479 aa27.24■■□□□ 1.95
CEACAM3-203ENST00000415495 ATG3Q9NT62 314 aa27.23■■□□□ 1.95
CEACAM3-203ENST00000415495 DBF4Q9UBU7 674 aaPredicted RBP27.23■■□□□ 1.95
CEACAM3-203ENST00000415495 USP16Q9Y5T5 823 aa27.23■■□□□ 1.95
CEACAM3-203ENST00000415495 PRIM1P49642 420 aaKnown RBP27.23■■□□□ 1.95
CEACAM3-203ENST00000415495 PHAXQ9H814 394 aaKnown RBP27.23■■□□□ 1.95
CEACAM3-203ENST00000415495 ASAP1Q9ULH1 1129 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms