RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 HOXB1P14653 301 aaPredicted RBP7.03□□□□□ -1.28
VPS41-205ENST00000414632 KIAA1210Q9ULL0 1709 aa7.03□□□□□ -1.28
VPS41-205ENST00000414632 PLEKHH1Q9ULM0 1364 aa7.03□□□□□ -1.28
VPS41-205ENST00000414632 ADGRB1O14514 1584 aa7.03□□□□□ -1.28
VPS41-205ENST00000414632 PTCH1Q13635 1447 aa7.02□□□□□ -1.29
VPS41-205ENST00000414632 ADGRL3Q9HAR2 1447 aa7.02□□□□□ -1.29
VPS41-205ENST00000414632 TRPM1Q7Z4N2 1603 aa7.02□□□□□ -1.29
VPS41-205ENST00000414632 FMN2Q9NZ56 1722 aa7.02□□□□□ -1.29
VPS41-205ENST00000414632 HOXA2O43364 376 aa7.02□□□□□ -1.29
VPS41-205ENST00000414632 SLC10A3P09131 477 aa7.02□□□□□ -1.29
VPS41-205ENST00000414632 SAFB2Q14151 953 aaKnown RBP eCLIP7.02□□□□□ -1.29
VPS41-205ENST00000414632 WAPLQ7Z5K2 1190 aa7.02□□□□□ -1.29
VPS41-205ENST00000414632 GLMNQ92990 594 aa7.02□□□□□ -1.29
VPS41-205ENST00000414632 PCDHGC3Q9UN70 934 aa7.02□□□□□ -1.29
VPS41-205ENST00000414632 LRPPRCP42704 1394 aaKnown RBP7.01□□□□□ -1.29
VPS41-205ENST00000414632 ATF3P18847 181 aa7.01□□□□□ -1.29
VPS41-205ENST00000414632 CTDSPL2Q05D32 466 aa7.01□□□□□ -1.29
VPS41-205ENST00000414632 ILDR2Q71H61 639 aa7.01□□□□□ -1.29
VPS41-205ENST00000414632 RETREG2Q8NC44 543 aa7.01□□□□□ -1.29
VPS41-205ENST00000414632 GJD4Q96KN9 370 aaPredicted RBP7.01□□□□□ -1.29
VPS41-205ENST00000414632 C14orf93Q9H972 538 aaKnown RBP7.01□□□□□ -1.29
VPS41-205ENST00000414632 NHSL1Q5SYE7 1610 aa7.01□□□□□ -1.29
VPS41-205ENST00000414632 MST1RQ04912 1400 aa7.01□□□□□ -1.29
VPS41-205ENST00000414632 CDC42BPGQ6DT37 1551 aa7□□□□□ -1.29
VPS41-205ENST00000414632 GUCA2AQ02747 115 aa7□□□□□ -1.29
VPS41-205ENST00000414632 IRF5Q13568 498 aa7□□□□□ -1.29
VPS41-205ENST00000414632 SWT1Q5T5J6 900 aaKnown RBP7□□□□□ -1.29
VPS41-205ENST00000414632 HDGFL1Q5TGJ6 251 aa7□□□□□ -1.29
VPS41-205ENST00000414632 KCTD17Q8N5Z5 321 aa7□□□□□ -1.29
VPS41-205ENST00000414632 HLA-CQ95604 372 aa7□□□□□ -1.29
VPS41-205ENST00000414632 L3MBTL2Q969R5 705 aa7□□□□□ -1.29
VPS41-205ENST00000414632 FAM163AQ96GL9 167 aaPredicted RBP7□□□□□ -1.29
VPS41-205ENST00000414632 ZBED2Q9BTP6 218 aa7□□□□□ -1.29
VPS41-205ENST00000414632 C19orf44Q9H6X5 657 aa7□□□□□ -1.29
VPS41-205ENST00000414632 SLAIN2Q9P270 581 aa7□□□□□ -1.29
VPS41-205ENST00000414632 TRAK1Q9UPV9 953 aa7□□□□□ -1.29
VPS41-205ENST00000414632 CCDC9Q9Y3X0 531 aaKnown RBP7□□□□□ -1.29
VPS41-205ENST00000414632 NDUFB9Q9Y6M9 179 aa7□□□□□ -1.29
VPS41-205ENST00000414632 COL16A1Q07092 1604 aaPredicted RBP7□□□□□ -1.29
VPS41-205ENST00000414632 TECPR2O15040 1411 aa7□□□□□ -1.29
VPS41-205ENST00000414632 PRAG1Q86YV5 1406 aa7□□□□□ -1.29
VPS41-205ENST00000414632 NCOA3Q9Y6Q9 1424 aa7□□□□□ -1.29
VPS41-205ENST00000414632 QRICH2Q9H0J4 1663 aa7□□□□□ -1.29
VPS41-205ENST00000414632 USP32Q8NFA0 1604 aa6.99□□□□□ -1.29
VPS41-205ENST00000414632 ST18O60284 1047 aa6.99□□□□□ -1.29
VPS41-205ENST00000414632 AEBP1Q8IUX7 1158 aa6.99□□□□□ -1.29
VPS41-205ENST00000414632 DDX17Q92841 729 aaKnown RBP6.99□□□□□ -1.29
VPS41-205ENST00000414632 PRAM1Q96QH2 718 aa6.99□□□□□ -1.29
VPS41-205ENST00000414632 DCCP43146 1447 aa6.99□□□□□ -1.29
VPS41-205ENST00000414632 FAM135BQ49AJ0 1406 aa6.99□□□□□ -1.29
VPS41-205ENST00000414632 MED1Q15648 1581 aaPredicted RBP6.99□□□□□ -1.29
VPS41-205ENST00000414632 AHDC1Q5TGY3 1603 aaPredicted RBP6.98□□□□□ -1.29
VPS41-205ENST00000414632 ABCC11Q96J66 1382 aa6.98□□□□□ -1.29
VPS41-205ENST00000414632 DLC1Q96QB1 1528 aa6.98□□□□□ -1.29
VPS41-205ENST00000414632 PSEN2P49810 448 aa6.98□□□□□ -1.29
VPS41-205ENST00000414632 MTMR2Q13614 643 aa6.98□□□□□ -1.29
VPS41-205ENST00000414632 NBPF1Q3BBV0 1214 aa6.98□□□□□ -1.29
VPS41-205ENST00000414632 NPM2Q86SE8 214 aaKnown RBP6.98□□□□□ -1.29
VPS41-205ENST00000414632 HIRIP3Q9BW71 556 aaPredicted RBP6.98□□□□□ -1.29
VPS41-205ENST00000414632 TRIM34Q9BYJ4 488 aa6.98□□□□□ -1.29
VPS41-205ENST00000414632 HMX1Q9NP08 348 aaPredicted RBP6.98□□□□□ -1.29
VPS41-205ENST00000414632 POGKQ9P215 609 aa6.98□□□□□ -1.29
VPS41-205ENST00000414632 C1orf167Q5SNV9 1468 aa6.98□□□□□ -1.29
VPS41-205ENST00000414632 TONSLQ96HA7 1378 aa6.97□□□□□ -1.29
VPS41-205ENST00000414632 ADGRB2O60241 1585 aa6.97□□□□□ -1.29
VPS41-205ENST00000414632 WASHC4Q2M389 1173 aa6.97□□□□□ -1.29
VPS41-205ENST00000414632 BRINP3Q76B58 766 aa6.97□□□□□ -1.29
VPS41-205ENST00000414632 TSC1Q92574 1164 aa6.97□□□□□ -1.29
VPS41-205ENST00000414632 ORAI2Q96SN7 254 aa6.97□□□□□ -1.29
VPS41-205ENST00000414632 SEPT9Q9UHD8 586 aaPredicted RBP6.97□□□□□ -1.29
VPS41-205ENST00000414632 RABGEF1Q9UJ41 708 aa6.97□□□□□ -1.29
VPS41-205ENST00000414632 SHPRHQ149N8 1683 aa6.96□□□□□ -1.29
VPS41-205ENST00000414632 ITSN1Q15811 1721 aa6.96□□□□□ -1.29
VPS41-205ENST00000414632 C6orf229H3BNL8 230 aa6.96□□□□□ -1.3
VPS41-205ENST00000414632 NBPF8Q3BBV2 869 aa6.96□□□□□ -1.3
VPS41-205ENST00000414632 HELBQ8NG08 1087 aaPredicted RBP6.96□□□□□ -1.3
VPS41-205ENST00000414632 ADAMTS19Q8TE59 1207 aa6.96□□□□□ -1.3
VPS41-205ENST00000414632 LRRN4Q8WUT4 740 aa6.96□□□□□ -1.3
VPS41-205ENST00000414632 KIF1AQ12756 1690 aa6.96□□□□□ -1.3
VPS41-205ENST00000414632 DISP3Q9P2K9 1392 aa6.95□□□□□ -1.3
VPS41-205ENST00000414632 CFAP99D6REC4 459 aa6.95□□□□□ -1.3
VPS41-205ENST00000414632 SLC4A3P48751 1232 aa6.95□□□□□ -1.3
VPS41-205ENST00000414632 FUT2Q10981 343 aa6.95□□□□□ -1.3
VPS41-205ENST00000414632 GRIPAP1Q4V328 841 aa6.95□□□□□ -1.3
VPS41-205ENST00000414632 TOPAZ1Q8N9V7 1692 aa6.94□□□□□ -1.3
VPS41-205ENST00000414632 ARHGAP33O14559 1287 aa6.94□□□□□ -1.3
VPS41-205ENST00000414632 GPR37L1O60883 481 aa6.94□□□□□ -1.3
VPS41-205ENST00000414632 RFX1P22670 979 aa6.94□□□□□ -1.3
VPS41-205ENST00000414632 XPCQ01831 940 aaPredicted RBP6.94□□□□□ -1.3
VPS41-205ENST00000414632 VAC14Q08AM6 782 aa6.94□□□□□ -1.3
VPS41-205ENST00000414632 ESCO1Q5FWF5 840 aa6.94□□□□□ -1.3
VPS41-205ENST00000414632 CCER1Q8TC90 406 aaPredicted RBP6.94□□□□□ -1.3
VPS41-205ENST00000414632 STAC3Q96MF2 364 aa6.94□□□□□ -1.3
VPS41-205ENST00000414632 SLC4A5Q9BY07 1137 aa6.94□□□□□ -1.3
VPS41-205ENST00000414632 ROCK2O75116 1388 aaKnown RBP6.94□□□□□ -1.3
VPS41-205ENST00000414632 TULP4Q9NRJ4 1543 aa6.93□□□□□ -1.3
VPS41-205ENST00000414632 EMP3P54852 163 aa6.93□□□□□ -1.3
VPS41-205ENST00000414632 PDE4CQ08493 712 aa6.93□□□□□ -1.3
VPS41-205ENST00000414632 FAM98CQ17RN3 349 aaKnown RBP6.93□□□□□ -1.3
VPS41-205ENST00000414632 SLF2Q8IX21 1173 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms