RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 STK26Q9P289 416 aa9.8□□□□□ -0.84
LINC00343-201ENST00000414368 GTF3C3Q9Y5Q9 886 aa9.8□□□□□ -0.84
LINC00343-201ENST00000414368 ZPR1O75312 459 aa9.79□□□□□ -0.84
LINC00343-201ENST00000414368 NBPF8Q3BBV2 869 aa9.79□□□□□ -0.84
LINC00343-201ENST00000414368 TATDN2Q93075 761 aa9.79□□□□□ -0.84
LINC00343-201ENST00000414368 REPIN1Q9BWE0 567 aaKnown RBP9.79□□□□□ -0.84
LINC00343-201ENST00000414368 AMOTL2Q9Y2J4 779 aa9.79□□□□□ -0.84
LINC00343-201ENST00000414368 ASXL1Q8IXJ9 1541 aa9.78□□□□□ -0.84
LINC00343-201ENST00000414368 NBPF1Q3BBV0 1214 aa9.78□□□□□ -0.84
LINC00343-201ENST00000414368 PROSER2Q86WR7 435 aaPredicted RBP9.78□□□□□ -0.84
LINC00343-201ENST00000414368 CRIPAKQ8N1N5 446 aa9.78□□□□□ -0.84
LINC00343-201ENST00000414368 PRAG1Q86YV5 1406 aa9.78□□□□□ -0.84
LINC00343-201ENST00000414368 XIRP1Q702N8 1843 aaKnown RBP9.77□□□□□ -0.84
LINC00343-201ENST00000414368 PIK3R4Q99570 1358 aa9.77□□□□□ -0.84
LINC00343-201ENST00000414368 NWD1Q149M9 1564 aa9.77□□□□□ -0.85
LINC00343-201ENST00000414368 RCCD1A6NED2 376 aa9.77□□□□□ -0.85
LINC00343-201ENST00000414368 SSTR3P32745 418 aaPredicted RBP9.77□□□□□ -0.85
LINC00343-201ENST00000414368 LIAT1Q6ZQX7 453 aa9.77□□□□□ -0.85
LINC00343-201ENST00000414368 EYA1Q99502 592 aa9.77□□□□□ -0.85
LINC00343-201ENST00000414368 LRRC7Q96NW7 1537 aa9.77□□□□□ -0.85
LINC00343-201ENST00000414368 XRN1Q8IZH2 1706 aaKnown RBP9.76□□□□□ -0.85
LINC00343-201ENST00000414368 LAMC1P11047 1609 aa9.76□□□□□ -0.85
LINC00343-201ENST00000414368 MS4A1P11836 297 aa9.76□□□□□ -0.85
LINC00343-201ENST00000414368 DNAJB2P25686 324 aa9.76□□□□□ -0.85
LINC00343-201ENST00000414368 LCE2CQ5TA81 110 aa9.76□□□□□ -0.85
LINC00343-201ENST00000414368 CPS1P31327 1500 aa9.76□□□□□ -0.85
LINC00343-201ENST00000414368 YTHDC2Q9H6S0 1430 aaKnown RBP9.75□□□□□ -0.85
LINC00343-201ENST00000414368 WAPLQ7Z5K2 1190 aa9.75□□□□□ -0.85
LINC00343-201ENST00000414368 ANKLE1Q8NAG6 615 aa9.75□□□□□ -0.85
LINC00343-201ENST00000414368 FAM217BQ9NTX9 383 aaPredicted RBP9.75□□□□□ -0.85
LINC00343-201ENST00000414368 ADGRB1O14514 1584 aa9.75□□□□□ -0.85
LINC00343-201ENST00000414368 LRPPRCP42704 1394 aaKnown RBP9.75□□□□□ -0.85
LINC00343-201ENST00000414368 TMEM94Q12767 1356 aa9.75□□□□□ -0.85
LINC00343-201ENST00000414368 ROBO2Q9HCK4 1378 aa9.75□□□□□ -0.85
LINC00343-201ENST00000414368 TRPM1Q7Z4N2 1603 aa9.74□□□□□ -0.85
LINC00343-201ENST00000414368 KIAA1210Q9ULL0 1709 aa9.74□□□□□ -0.85
LINC00343-201ENST00000414368 NECTIN2Q92692 538 aa9.74□□□□□ -0.85
LINC00343-201ENST00000414368 TRAK1Q9UPV9 953 aa9.74□□□□□ -0.85
LINC00343-201ENST00000414368 NKTRP30414 1462 aaKnown RBP9.73□□□□□ -0.85
LINC00343-201ENST00000414368 PLEKHG3A1L390 1219 aa9.73□□□□□ -0.85
LINC00343-201ENST00000414368 C3orf80F5H4A9 247 aa9.73□□□□□ -0.85
LINC00343-201ENST00000414368 TERTO14746 1132 aaKnown RBP9.73□□□□□ -0.85
LINC00343-201ENST00000414368 AXIN1O15169 862 aa9.73□□□□□ -0.85
LINC00343-201ENST00000414368 TIMELESSQ9UNS1 1208 aa9.73□□□□□ -0.85
LINC00343-201ENST00000414368 ABCC11Q96J66 1382 aa9.73□□□□□ -0.85
LINC00343-201ENST00000414368 PLEKHH1Q9ULM0 1364 aa9.73□□□□□ -0.85
LINC00343-201ENST00000414368 SAFB2Q14151 953 aaKnown RBP eCLIP9.72□□□□□ -0.85
LINC00343-201ENST00000414368 C14orf37Q86TY3 774 aa9.72□□□□□ -0.85
LINC00343-201ENST00000414368 SULF1Q8IWU6 871 aa9.72□□□□□ -0.85
LINC00343-201ENST00000414368 BEGAINQ9BUH8 593 aa9.72□□□□□ -0.85
LINC00343-201ENST00000414368 KNDC1Q76NI1 1749 aa9.71□□□□□ -0.85
LINC00343-201ENST00000414368 PRAM1Q96QH2 718 aa9.71□□□□□ -0.86
LINC00343-201ENST00000414368 TMEM134Q9H6X4 195 aa9.71□□□□□ -0.86
LINC00343-201ENST00000414368 ROCK2O75116 1388 aaKnown RBP9.71□□□□□ -0.86
LINC00343-201ENST00000414368 DDX11L8A8MPP1 907 aa9.7□□□□□ -0.86
LINC00343-201ENST00000414368 PPEF1O14829 653 aaPredicted RBP9.7□□□□□ -0.86
LINC00343-201ENST00000414368 POGKQ9P215 609 aa9.7□□□□□ -0.86
LINC00343-201ENST00000414368 TECPR2O15040 1411 aa9.7□□□□□ -0.86
LINC00343-201ENST00000414368 PTCH1Q13635 1447 aa9.7□□□□□ -0.86
LINC00343-201ENST00000414368 NALCNQ8IZF0 1738 aa9.7□□□□□ -0.86
LINC00343-201ENST00000414368 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.7□□□□□ -0.86
LINC00343-201ENST00000414368 UBAP1LF5GYI3 381 aa9.69□□□□□ -0.86
LINC00343-201ENST00000414368 SLC4A3P48751 1232 aa9.69□□□□□ -0.86
LINC00343-201ENST00000414368 RALGAPBQ86X10 1494 aa9.69□□□□□ -0.86
LINC00343-201ENST00000414368 ARHGEF28Q8N1W1 1705 aaKnown RBP9.69□□□□□ -0.86
LINC00343-201ENST00000414368 SIRT1Q96EB6 747 aa9.69□□□□□ -0.86
LINC00343-201ENST00000414368 CARD11Q9BXL7 1154 aa9.69□□□□□ -0.86
LINC00343-201ENST00000414368 RSPH6AQ9H0K4 717 aa9.69□□□□□ -0.86
LINC00343-201ENST00000414368 MSH6P52701 1360 aa9.68□□□□□ -0.86
LINC00343-201ENST00000414368 AVPP01185 164 aa9.68□□□□□ -0.86
LINC00343-201ENST00000414368 HIRIP3Q9BW71 556 aaPredicted RBP9.68□□□□□ -0.86
LINC00343-201ENST00000414368 C19orf44Q9H6X5 657 aa9.68□□□□□ -0.86
LINC00343-201ENST00000414368 DLC1Q96QB1 1528 aa9.67□□□□□ -0.86
LINC00343-201ENST00000414368 IQSEC2Q5JU85 1478 aa9.67□□□□□ -0.86
LINC00343-201ENST00000414368 FAM135BQ49AJ0 1406 aa9.67□□□□□ -0.86
LINC00343-201ENST00000414368 GPRASP1Q5JY77 1395 aa9.67□□□□□ -0.86
LINC00343-201ENST00000414368 RDH13Q8NBN7 331 aa9.67□□□□□ -0.86
LINC00343-201ENST00000414368 PCMTD1Q96MG8 357 aaPredicted RBP9.67□□□□□ -0.86
LINC00343-201ENST00000414368 ADGRL3Q9HAR2 1447 aa9.66□□□□□ -0.86
LINC00343-201ENST00000414368 NCOA3Q9Y6Q9 1424 aa9.66□□□□□ -0.86
LINC00343-201ENST00000414368 ATF3P18847 181 aa9.66□□□□□ -0.86
LINC00343-201ENST00000414368 PIP4K2BP78356 416 aa9.66□□□□□ -0.86
LINC00343-201ENST00000414368 FOXC1Q12948 553 aa9.66□□□□□ -0.86
LINC00343-201ENST00000414368 CTC1Q2NKJ3 1217 aa9.66□□□□□ -0.86
LINC00343-201ENST00000414368 GOPCQ9HD26 462 aa9.66□□□□□ -0.86
LINC00343-201ENST00000414368 TOM1O60784 492 aa9.65□□□□□ -0.86
LINC00343-201ENST00000414368 DIXDC1Q155Q3 683 aa9.65□□□□□ -0.86
LINC00343-201ENST00000414368 ERICH6Q7L0X2 663 aa9.65□□□□□ -0.86
LINC00343-201ENST00000414368 ZSCAN1Q8NBB4 408 aa9.65□□□□□ -0.86
LINC00343-201ENST00000414368 RGPD8O14715 1765 aaPredicted RBP9.65□□□□□ -0.87
LINC00343-201ENST00000414368 QRICH2Q9H0J4 1663 aa9.64□□□□□ -0.87
LINC00343-201ENST00000414368 CENPJQ9HC77 1338 aaPredicted RBP9.64□□□□□ -0.87
LINC00343-201ENST00000414368 CD46P15529 392 aa9.64□□□□□ -0.87
LINC00343-201ENST00000414368 SH3D19Q5HYK7 790 aa9.64□□□□□ -0.87
LINC00343-201ENST00000414368 SWT1Q5T5J6 900 aaKnown RBP9.64□□□□□ -0.87
LINC00343-201ENST00000414368 NUTM1Q86Y26 1132 aa9.64□□□□□ -0.87
LINC00343-201ENST00000414368 PKD2L1Q9P0L9 805 aa9.64□□□□□ -0.87
LINC00343-201ENST00000414368 SLAIN2Q9P270 581 aa9.64□□□□□ -0.87
LINC00343-201ENST00000414368 PCDHB3Q9Y5E6 796 aa9.64□□□□□ -0.87
LINC00343-201ENST00000414368 ST20-MTHFSA0A0A6YYL1 179 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms