RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 ABCC6O95255 1503 aa17.27■□□□□ 0.36
SNHG17-202ENST00000414142 CACNA1FO60840 1977 aa17.26■□□□□ 0.35
SNHG17-202ENST00000414142 C8orf34Q49A92 452 aa17.26■□□□□ 0.35
SNHG17-202ENST00000414142 SMC5Q8IY18 1101 aa17.26■□□□□ 0.35
SNHG17-202ENST00000414142 PRDM11Q9NQV5 511 aa17.26■□□□□ 0.35
SNHG17-202ENST00000414142 EIF4A1P60842 406 aaKnown RBP17.26■□□□□ 0.35
SNHG17-202ENST00000414142 BCL11AQ9H165 835 aa17.26■□□□□ 0.35
SNHG17-202ENST00000414142 SPG7Q9UQ90 795 aa17.26■□□□□ 0.35
SNHG17-202ENST00000414142 FAM208AQ9UK61 1670 aaKnown RBP17.25■□□□□ 0.35
SNHG17-202ENST00000414142 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
SNHG17-202ENST00000414142 HDGFL1Q5TGJ6 251 aa17.25■□□□□ 0.35
SNHG17-202ENST00000414142 SLC4A10Q6U841 1118 aa17.25■□□□□ 0.35
SNHG17-202ENST00000414142 F6X3S4 739 aa17.24■□□□□ 0.35
SNHG17-202ENST00000414142 KCNQ3O43525 872 aa17.24■□□□□ 0.35
SNHG17-202ENST00000414142 OVOS2A0A0G2JMS6 1433 aa17.24■□□□□ 0.35
SNHG17-202ENST00000414142 EIF2S2P20042 333 aaKnown RBP17.24■□□□□ 0.35
SNHG17-202ENST00000414142 FLIIQ13045 1269 aa17.24■□□□□ 0.35
SNHG17-202ENST00000414142 FKBP5Q13451 457 aaPredicted RBP17.24■□□□□ 0.35
SNHG17-202ENST00000414142 CCT4P50991 539 aaKnown RBP17.23■□□□□ 0.35
SNHG17-202ENST00000414142 CHMP4AQ9BY43 222 aa17.23■□□□□ 0.35
SNHG17-202ENST00000414142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNHG17-202ENST00000414142 MEGF6O75095 1541 aa17.22■□□□□ 0.35
SNHG17-202ENST00000414142 HOXB7P09629 217 aa17.21■□□□□ 0.35
SNHG17-202ENST00000414142 GCC1Q96CN9 775 aa17.21■□□□□ 0.35
SNHG17-202ENST00000414142 PHKG2P15735 406 aa17.21■□□□□ 0.35
SNHG17-202ENST00000414142 SIRT2Q8IXJ6 389 aa17.21■□□□□ 0.35
SNHG17-202ENST00000414142 IFNL2Q8IZJ0 200 aa17.21■□□□□ 0.35
SNHG17-202ENST00000414142 NHSL1Q5SYE7 1610 aa17.21■□□□□ 0.35
SNHG17-202ENST00000414142 NUCB1Q02818 461 aa17.2■□□□□ 0.34
SNHG17-202ENST00000414142 TOM1L2Q6ZVM7 507 aa17.2■□□□□ 0.34
SNHG17-202ENST00000414142 MEIS3Q99687 375 aa17.2■□□□□ 0.34
SNHG17-202ENST00000414142 ANKRD45Q5TZF3 282 aa17.19■□□□□ 0.34
SNHG17-202ENST00000414142 WDR17Q8IZU2 1322 aa17.19■□□□□ 0.34
SNHG17-202ENST00000414142 CHD1LQ86WJ1 897 aa17.18■□□□□ 0.34
SNHG17-202ENST00000414142 DDRGK1Q96HY6 314 aa17.18■□□□□ 0.34
SNHG17-202ENST00000414142 LNPKQ9C0E8 428 aa17.18■□□□□ 0.34
SNHG17-202ENST00000414142 SIPA1L3O60292 1781 aaPredicted RBP17.18■□□□□ 0.34
SNHG17-202ENST00000414142 ABCA3Q99758 1704 aa17.18■□□□□ 0.34
SNHG17-202ENST00000414142 SCN11AQ9UI33 1791 aa17.18■□□□□ 0.34
SNHG17-202ENST00000414142 RPAP2Q8IXW5 612 aaPredicted RBP17.18■□□□□ 0.34
SNHG17-202ENST00000414142 PHAXQ9H814 394 aaKnown RBP17.18■□□□□ 0.34
SNHG17-202ENST00000414142 ADAMTS7Q9UKP4 1686 aa17.18■□□□□ 0.34
SNHG17-202ENST00000414142 ANKRD44Q8N8A2 993 aa17.17■□□□□ 0.34
SNHG17-202ENST00000414142 SLC52A2Q9HAB3 445 aa17.17■□□□□ 0.34
SNHG17-202ENST00000414142 CHPF2Q9P2E5 772 aa17.17■□□□□ 0.34
SNHG17-202ENST00000414142 PLEKHG2Q9H7P9 1386 aa17.17■□□□□ 0.34
SNHG17-202ENST00000414142 EVA1CP58658 441 aa17.17■□□□□ 0.34
SNHG17-202ENST00000414142 KDM6AO15550 1401 aaPredicted RBP17.16■□□□□ 0.34
SNHG17-202ENST00000414142 CYP27B1O15528 508 aa17.15■□□□□ 0.34
SNHG17-202ENST00000414142 GIGYF1O75420 1035 aaPredicted RBP17.15■□□□□ 0.34
SNHG17-202ENST00000414142 CEP85Q6P2H3 762 aa17.15■□□□□ 0.34
SNHG17-202ENST00000414142 NFATC2IPQ8NCF5 419 aa17.15■□□□□ 0.34
SNHG17-202ENST00000414142 DCAF5Q96JK2 942 aa17.15■□□□□ 0.34
SNHG17-202ENST00000414142 STRN4Q9NRL3 753 aa17.15■□□□□ 0.34
SNHG17-202ENST00000414142 COL5A2P05997 1499 aaPredicted RBP17.15■□□□□ 0.34
SNHG17-202ENST00000414142 HSP90AB1P08238 724 aaKnown RBP17.15■□□□□ 0.34
SNHG17-202ENST00000414142 PKD1L3Q7Z443 1732 aa17.14■□□□□ 0.34
SNHG17-202ENST00000414142 SLC39A6Q13433 755 aa17.14■□□□□ 0.33
SNHG17-202ENST00000414142 DCTPP1Q9H773 170 aa17.14■□□□□ 0.33
SNHG17-202ENST00000414142 ATP10DQ9P241 1426 aa17.14■□□□□ 0.33
SNHG17-202ENST00000414142 DBF4Q9UBU7 674 aaPredicted RBP17.14■□□□□ 0.33
SNHG17-202ENST00000414142 HEG1Q9ULI3 1381 aa17.13■□□□□ 0.33
SNHG17-202ENST00000414142 ANXA1P04083 346 aa17.13■□□□□ 0.33
SNHG17-202ENST00000414142 GNAI2P04899 355 aa17.13■□□□□ 0.33
SNHG17-202ENST00000414142 GNAI3P08754 354 aa17.13■□□□□ 0.33
SNHG17-202ENST00000414142 ZNF790Q6PG37 636 aa17.13■□□□□ 0.33
SNHG17-202ENST00000414142 ZCRB1Q8TBF4 217 aaKnown RBP17.12■□□□□ 0.33
SNHG17-202ENST00000414142 CARD10Q9BWT7 1032 aa17.12■□□□□ 0.33
SNHG17-202ENST00000414142 PARP4Q9UKK3 1724 aaKnown RBP17.12■□□□□ 0.33
SNHG17-202ENST00000414142 PRAMEF22A3QJZ6 481 aa17.12■□□□□ 0.33
SNHG17-202ENST00000414142 HMMRO75330 724 aa17.12■□□□□ 0.33
SNHG17-202ENST00000414142 PXDNLA1KZ92 1463 aa17.12■□□□□ 0.33
SNHG17-202ENST00000414142 ROBO1Q9Y6N7 1651 aa17.11■□□□□ 0.33
SNHG17-202ENST00000414142 CABP4P57796 275 aa17.11■□□□□ 0.33
SNHG17-202ENST00000414142 LARP1Q6PKG0 1096 aaKnown RBP17.11■□□□□ 0.33
SNHG17-202ENST00000414142 IL2RBP14784 551 aa17.11■□□□□ 0.33
SNHG17-202ENST00000414142 PCDH11XQ9BZA7 1347 aa17.1■□□□□ 0.33
SNHG17-202ENST00000414142 PCDH11YQ9BZA8 1340 aa17.1■□□□□ 0.33
SNHG17-202ENST00000414142 SEC24BO95487 1268 aa17.1■□□□□ 0.33
SNHG17-202ENST00000414142 TTC5Q8N0Z6 440 aa17.1■□□□□ 0.33
SNHG17-202ENST00000414142 N4BP2Q86UW6 1770 aaPredicted RBP17.1■□□□□ 0.33
SNHG17-202ENST00000414142 PI4KAP2A4QPH2 592 aa17.09■□□□□ 0.33
SNHG17-202ENST00000414142 PI4KAP1Q8N8J0 262 aa17.09■□□□□ 0.33
SNHG17-202ENST00000414142 DNAAF4Q8WXU2 420 aa17.09■□□□□ 0.33
SNHG17-202ENST00000414142 SRCIN1Q9C0H9 1055 aa17.09■□□□□ 0.33
SNHG17-202ENST00000414142 HYPKQ9NX55 129 aa17.08■□□□□ 0.33
SNHG17-202ENST00000414142 UBTFL1P0CB47 393 aaPredicted RBP17.08■□□□□ 0.32
SNHG17-202ENST00000414142 PROSER3Q2NL68 480 aa17.08■□□□□ 0.32
SNHG17-202ENST00000414142 USP44Q9H0E7 712 aa17.08■□□□□ 0.32
SNHG17-202ENST00000414142 BTG4Q9NY30 223 aa17.08■□□□□ 0.32
SNHG17-202ENST00000414142 LTBP4Q8N2S1 1624 aa17.07■□□□□ 0.32
SNHG17-202ENST00000414142 DDX54Q8TDD1 881 aaKnown RBP17.07■□□□□ 0.32
SNHG17-202ENST00000414142 ZNF496Q96IT1 587 aaPredicted RBP17.07■□□□□ 0.32
SNHG17-202ENST00000414142 UPF2Q9HAU5 1272 aaKnown RBP17.07■□□□□ 0.32
SNHG17-202ENST00000414142 USP35Q9P2H5 1018 aa17.07■□□□□ 0.32
SNHG17-202ENST00000414142 MRC1P22897 1456 aa17.07■□□□□ 0.32
SNHG17-202ENST00000414142 APBB1O00213 710 aa17.06■□□□□ 0.32
SNHG17-202ENST00000414142 DDX21Q9NR30 783 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNHG17-202ENST00000414142 LRRFIP2Q9Y608 721 aaKnown RBP17.06■□□□□ 0.32
SNHG17-202ENST00000414142 BEND3Q5T5X7 828 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms