RNA–Protein interactions for RNA: ENST00000413718.1

LINC00111-201, long intergenic non-protein coding RNA 111, humanhuman

TSL 3 BASIC

Gene LINC00111, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00111-201ENST00000413718 GNPATO15228 680 aa13.17□□□□□ -0.3
LINC00111-201ENST00000413718 EYA1Q99502 592 aa13.17□□□□□ -0.3
LINC00111-201ENST00000413718 C4AP0C0L4 1744 aa13.16□□□□□ -0.3
LINC00111-201ENST00000413718 MMP10P09238 476 aa13.16□□□□□ -0.3
LINC00111-201ENST00000413718 PHKG2P15735 406 aa13.16□□□□□ -0.3
LINC00111-201ENST00000413718 TRIM26Q12899 539 aaPredicted RBP13.16□□□□□ -0.3
LINC00111-201ENST00000413718 SLC4A9Q96Q91 983 aa13.16□□□□□ -0.3
LINC00111-201ENST00000413718 N4BP2Q86UW6 1770 aaPredicted RBP13.16□□□□□ -0.3
LINC00111-201ENST00000413718 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
LINC00111-201ENST00000413718 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.3
LINC00111-201ENST00000413718 SPG7Q9UQ90 795 aa13.15□□□□□ -0.3
LINC00111-201ENST00000413718 KDM6AO15550 1401 aaPredicted RBP13.14□□□□□ -0.31
LINC00111-201ENST00000413718 POLKQ9UBT6 870 aa13.13□□□□□ -0.31
LINC00111-201ENST00000413718 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
LINC00111-201ENST00000413718 ADAMTS7Q9UKP4 1686 aa13.12□□□□□ -0.31
LINC00111-201ENST00000413718 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
LINC00111-201ENST00000413718 TGFB2P61812 414 aa13.12□□□□□ -0.31
LINC00111-201ENST00000413718 CDCA8Q53HL2 280 aa13.12□□□□□ -0.31
LINC00111-201ENST00000413718 IFNL2Q8IZJ0 200 aa13.12□□□□□ -0.31
LINC00111-201ENST00000413718 DNAJC5GQ8N7S2 189 aa13.12□□□□□ -0.31
LINC00111-201ENST00000413718 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
LINC00111-201ENST00000413718 ARFGEF1Q9Y6D6 1849 aa13.11□□□□□ -0.31
LINC00111-201ENST00000413718 WDR90Q96KV7 1748 aa13.11□□□□□ -0.31
LINC00111-201ENST00000413718 GYS1P13807 737 aa13.11□□□□□ -0.31
LINC00111-201ENST00000413718 APLP1P51693 650 aa13.11□□□□□ -0.31
LINC00111-201ENST00000413718 EIF4A2Q14240 407 aaKnown RBP13.11□□□□□ -0.31
LINC00111-201ENST00000413718 TJP1Q07157 1748 aa13.1□□□□□ -0.31
LINC00111-201ENST00000413718 ADRA2BP18089 450 aa13.1□□□□□ -0.31
LINC00111-201ENST00000413718 RC3H1Q5TC82 1133 aaKnown RBP13.1□□□□□ -0.31
LINC00111-201ENST00000413718 A0A0G2JLW4 131 aa13.09□□□□□ -0.31
LINC00111-201ENST00000413718 PPM1GO15355 546 aaPredicted RBP13.09□□□□□ -0.31
LINC00111-201ENST00000413718 TOMM70O94826 608 aa13.09□□□□□ -0.31
LINC00111-201ENST00000413718 DPEP1P16444 411 aa13.09□□□□□ -0.31
LINC00111-201ENST00000413718 KCNA3P22001 575 aa13.09□□□□□ -0.31
LINC00111-201ENST00000413718 ARHGEF1Q92888 912 aaKnown RBP13.09□□□□□ -0.31
LINC00111-201ENST00000413718 NMRK2Q9NPI5 230 aa13.09□□□□□ -0.31
LINC00111-201ENST00000413718 BCS1LQ9Y276 419 aa13.09□□□□□ -0.31
LINC00111-201ENST00000413718 RTCBQ9Y3I0 505 aaKnown RBP13.09□□□□□ -0.31
LINC00111-201ENST00000413718 ERVV-2B6SEH9 535 aa13.08□□□□□ -0.32
LINC00111-201ENST00000413718 NLGN1Q8N2Q7 840 aa13.08□□□□□ -0.32
LINC00111-201ENST00000413718 PCNTO95613 3336 aa13.07□□□□□ -0.32
LINC00111-201ENST00000413718 TRAPPC3LQ5T215 181 aa13.07□□□□□ -0.32
LINC00111-201ENST00000413718 RPS6KA4O75676 772 aa13.06□□□□□ -0.32
LINC00111-201ENST00000413718 DDR1Q08345 913 aa13.06□□□□□ -0.32
LINC00111-201ENST00000413718 RBM46Q8TBY0 533 aaKnown RBP13.06□□□□□ -0.32
LINC00111-201ENST00000413718 DCAF5Q96JK2 942 aa13.06□□□□□ -0.32
LINC00111-201ENST00000413718 CCDC87Q9NVE4 849 aa13.06□□□□□ -0.32
LINC00111-201ENST00000413718 KCPQ6ZWJ8 1503 aa13.06□□□□□ -0.32
LINC00111-201ENST00000413718 TNRC6CQ9HCJ0 1690 aaKnown RBP13.05□□□□□ -0.32
LINC00111-201ENST00000413718 MRC1P22897 1456 aa13.05□□□□□ -0.32
LINC00111-201ENST00000413718 USP42Q9H9J4 1324 aaKnown RBP13.05□□□□□ -0.32
LINC00111-201ENST00000413718 FCHSD2O94868 740 aa13.04□□□□□ -0.32
LINC00111-201ENST00000413718 C9orf131Q5VYM1 1079 aa13.04□□□□□ -0.32
LINC00111-201ENST00000413718 NRXN2Q9P2S2 1712 aa13.04□□□□□ -0.32
LINC00111-201ENST00000413718 HSP90AB1P08238 724 aaKnown RBP13.03□□□□□ -0.32
LINC00111-201ENST00000413718 CRKLP46109 303 aaKnown RBP13.03□□□□□ -0.32
LINC00111-201ENST00000413718 ARHGAP27Q6ZUM4 889 aa13.03□□□□□ -0.32
LINC00111-201ENST00000413718 JMYQ8N9B5 988 aa13.03□□□□□ -0.32
LINC00111-201ENST00000413718 RBM42Q9BTD8 480 aaKnown RBP13.03□□□□□ -0.32
LINC00111-201ENST00000413718 SRP68Q9UHB9 627 aaKnown RBP13.03□□□□□ -0.32
LINC00111-201ENST00000413718 PARP3Q9Y6F1 533 aa13.03□□□□□ -0.32
LINC00111-201ENST00000413718 RFC4P35249 363 aa13.02□□□□□ -0.33
LINC00111-201ENST00000413718 FKBP8Q14318 412 aa13.02□□□□□ -0.33
LINC00111-201ENST00000413718 ZNF530Q6P9A1 599 aaPredicted RBP13.02□□□□□ -0.33
LINC00111-201ENST00000413718 AEBP1Q8IUX7 1158 aa13.02□□□□□ -0.33
LINC00111-201ENST00000413718 SCN11AQ9UI33 1791 aa13.02□□□□□ -0.33
LINC00111-201ENST00000413718 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.33
LINC00111-201ENST00000413718 POLRMTO00411 1230 aaKnown RBP13.01□□□□□ -0.33
LINC00111-201ENST00000413718 HTRA3P83110 453 aa13.01□□□□□ -0.33
LINC00111-201ENST00000413718 FSTL1Q12841 308 aa13.01□□□□□ -0.33
LINC00111-201ENST00000413718 KLRG1Q96E93 195 aa13.01□□□□□ -0.33
LINC00111-201ENST00000413718 SBF1O95248 1867 aa13.01□□□□□ -0.33
LINC00111-201ENST00000413718 AMOTQ4VCS5 1084 aa13□□□□□ -0.33
LINC00111-201ENST00000413718 PLEKHO1Q53GL0 409 aaPredicted RBP13□□□□□ -0.33
LINC00111-201ENST00000413718 INTS5Q6P9B9 1019 aaKnown RBP13□□□□□ -0.33
LINC00111-201ENST00000413718 PIM2Q9P1W9 311 aa13□□□□□ -0.33
LINC00111-201ENST00000413718 SOS1Q07889 1333 aaPredicted RBP12.99□□□□□ -0.33
LINC00111-201ENST00000413718 CHRNA5P30532 468 aa12.99□□□□□ -0.33
LINC00111-201ENST00000413718 TNNT2P45379 298 aaPredicted RBP12.99□□□□□ -0.33
LINC00111-201ENST00000413718 CABP4P57796 275 aa12.99□□□□□ -0.33
LINC00111-201ENST00000413718 DALRD3Q5D0E6 543 aaKnown RBP12.99□□□□□ -0.33
LINC00111-201ENST00000413718 RNF181Q9P0P0 153 aa12.99□□□□□ -0.33
LINC00111-201ENST00000413718 ZC3H4Q9UPT8 1303 aaKnown RBP12.98□□□□□ -0.33
LINC00111-201ENST00000413718 AFDNP55196 1824 aaKnown RBP12.98□□□□□ -0.33
LINC00111-201ENST00000413718 PTCD1O75127 700 aaKnown RBP12.98□□□□□ -0.33
LINC00111-201ENST00000413718 TM4SF1P30408 202 aa12.98□□□□□ -0.33
LINC00111-201ENST00000413718 PRELPP51888 382 aa12.98□□□□□ -0.33
LINC00111-201ENST00000413718 TIAM2Q8IVF5 1701 aa12.98□□□□□ -0.33
LINC00111-201ENST00000413718 KDM2BQ8NHM5 1336 aa12.97□□□□□ -0.33
LINC00111-201ENST00000413718 COL13A1Q5TAT6 717 aaPredicted RBP12.97□□□□□ -0.33
LINC00111-201ENST00000413718 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
LINC00111-201ENST00000413718 CARMIL3Q8ND23 1372 aa12.96□□□□□ -0.33
LINC00111-201ENST00000413718 MTHFSP49914 203 aa12.96□□□□□ -0.33
LINC00111-201ENST00000413718 RASSF7Q02833 373 aa12.96□□□□□ -0.33
LINC00111-201ENST00000413718 NFATC2IPQ8NCF5 419 aa12.96□□□□□ -0.33
LINC00111-201ENST00000413718 PCGF6Q9BYE7 350 aa12.96□□□□□ -0.33
LINC00111-201ENST00000413718 COL15A1P39059 1388 aa12.95□□□□□ -0.34
LINC00111-201ENST00000413718 IL13P35225 146 aa12.95□□□□□ -0.34
LINC00111-201ENST00000413718 DNAJC10Q8IXB1 793 aa12.95□□□□□ -0.34
LINC00111-201ENST00000413718 BCL2L12Q9HB09 334 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms