RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 KIF20BQ96Q89 1820 aa12.55□□□□□ -0.4
MRPL48-204ENST00000411840 ATG3Q9NT62 314 aa12.55□□□□□ -0.4
MRPL48-204ENST00000411840 CEP350Q5VT06 3117 aa12.55□□□□□ -0.4
MRPL48-204ENST00000411840 C4BP0C0L5 1744 aa12.54□□□□□ -0.4
MRPL48-204ENST00000411840 KAT6BQ8WYB5 2073 aa12.54□□□□□ -0.4
MRPL48-204ENST00000411840 GNPATO15228 680 aa12.54□□□□□ -0.4
MRPL48-204ENST00000411840 PCGF6Q9BYE7 350 aa12.54□□□□□ -0.4
MRPL48-204ENST00000411840 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
MRPL48-204ENST00000411840 WWC3Q9ULE0 1092 aa12.53□□□□□ -0.4
MRPL48-204ENST00000411840 IGSF1Q8N6C5 1336 aa12.53□□□□□ -0.4
MRPL48-204ENST00000411840 PKD1L3Q7Z443 1732 aa12.53□□□□□ -0.4
MRPL48-204ENST00000411840 ATP10DQ9P241 1426 aa12.53□□□□□ -0.4
MRPL48-204ENST00000411840 CHD4Q14839 1912 aa12.52□□□□□ -0.4
MRPL48-204ENST00000411840 ERVV-2B6SEH9 535 aa12.52□□□□□ -0.41
MRPL48-204ENST00000411840 TRAPPC3LQ5T215 181 aa12.52□□□□□ -0.41
MRPL48-204ENST00000411840 PANK3Q9H999 370 aa12.52□□□□□ -0.41
MRPL48-204ENST00000411840 PLEKHO1Q53GL0 409 aaPredicted RBP12.51□□□□□ -0.41
MRPL48-204ENST00000411840 DCAF5Q96JK2 942 aa12.51□□□□□ -0.41
MRPL48-204ENST00000411840 SLC4A9Q96Q91 983 aa12.51□□□□□ -0.41
MRPL48-204ENST00000411840 GPBP1L1Q9HC44 474 aaPredicted RBP12.51□□□□□ -0.41
MRPL48-204ENST00000411840 CLSPNQ9HAW4 1339 aa12.51□□□□□ -0.41
MRPL48-204ENST00000411840 HSP90AB1P08238 724 aaKnown RBP12.5□□□□□ -0.41
MRPL48-204ENST00000411840 MMP10P09238 476 aa12.5□□□□□ -0.41
MRPL48-204ENST00000411840 HSPA5P11021 654 aaKnown RBP12.5□□□□□ -0.41
MRPL48-204ENST00000411840 EIF4G2P78344 907 aaKnown RBP eCLIP12.5□□□□□ -0.41
MRPL48-204ENST00000411840 ZNF526Q8TF50 670 aaPredicted RBP12.5□□□□□ -0.41
MRPL48-204ENST00000411840 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
MRPL48-204ENST00000411840 RTCBQ9Y3I0 505 aaKnown RBP12.5□□□□□ -0.41
MRPL48-204ENST00000411840 PLEKHG2Q9H7P9 1386 aa12.5□□□□□ -0.41
MRPL48-204ENST00000411840 ANKRD26Q9UPS8 1709 aa12.49□□□□□ -0.41
MRPL48-204ENST00000411840 CABP4P57796 275 aa12.49□□□□□ -0.41
MRPL48-204ENST00000411840 AMOTQ4VCS5 1084 aa12.49□□□□□ -0.41
MRPL48-204ENST00000411840 RC3H1Q5TC82 1133 aaKnown RBP12.49□□□□□ -0.41
MRPL48-204ENST00000411840 NLGN1Q8N2Q7 840 aa12.49□□□□□ -0.41
MRPL48-204ENST00000411840 ARHGEF1Q92888 912 aaKnown RBP12.49□□□□□ -0.41
MRPL48-204ENST00000411840 TAF1LQ8IZX4 1826 aa12.48□□□□□ -0.41
MRPL48-204ENST00000411840 ADCY9O60503 1353 aa12.48□□□□□ -0.41
MRPL48-204ENST00000411840 ZNF530Q6P9A1 599 aaPredicted RBP12.48□□□□□ -0.41
MRPL48-204ENST00000411840 MORC1Q86VD1 984 aa12.48□□□□□ -0.41
MRPL48-204ENST00000411840 ITGB4P16144 1822 aa12.48□□□□□ -0.41
MRPL48-204ENST00000411840 KDRP35968 1356 aa12.47□□□□□ -0.41
MRPL48-204ENST00000411840 A0A0G2JLW4 131 aa12.47□□□□□ -0.41
MRPL48-204ENST00000411840 MTHFSP49914 203 aa12.47□□□□□ -0.41
MRPL48-204ENST00000411840 TGFB2P61812 414 aa12.47□□□□□ -0.41
MRPL48-204ENST00000411840 MAP2P11137 1827 aaKnown RBP12.46□□□□□ -0.41
MRPL48-204ENST00000411840 PTCD1O75127 700 aaKnown RBP12.46□□□□□ -0.41
MRPL48-204ENST00000411840 RPS6KA4O75676 772 aa12.46□□□□□ -0.41
MRPL48-204ENST00000411840 GYS1P13807 737 aa12.46□□□□□ -0.41
MRPL48-204ENST00000411840 RFC4P35249 363 aa12.46□□□□□ -0.41
MRPL48-204ENST00000411840 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
MRPL48-204ENST00000411840 AEBP1Q8IUX7 1158 aa12.46□□□□□ -0.41
MRPL48-204ENST00000411840 NFATC2IPQ8NCF5 419 aa12.46□□□□□ -0.41
MRPL48-204ENST00000411840 CNTNAP4Q9C0A0 1308 aa12.45□□□□□ -0.42
MRPL48-204ENST00000411840 UBR3Q6ZT12 1888 aa12.45□□□□□ -0.42
MRPL48-204ENST00000411840 C1orf141Q5JVX7 400 aa12.45□□□□□ -0.42
MRPL48-204ENST00000411840 SULT6B1Q6IMI4 303 aa12.45□□□□□ -0.42
MRPL48-204ENST00000411840 KDM6AO15550 1401 aaPredicted RBP12.45□□□□□ -0.42
MRPL48-204ENST00000411840 BCS1LQ9Y276 419 aa12.44□□□□□ -0.42
MRPL48-204ENST00000411840 PARP3Q9Y6F1 533 aa12.44□□□□□ -0.42
MRPL48-204ENST00000411840 PXDNLA1KZ92 1463 aa12.44□□□□□ -0.42
MRPL48-204ENST00000411840 DPEP1P16444 411 aa12.43□□□□□ -0.42
MRPL48-204ENST00000411840 HSPA6P17066 643 aa12.43□□□□□ -0.42
MRPL48-204ENST00000411840 IL13P35225 146 aa12.43□□□□□ -0.42
MRPL48-204ENST00000411840 ARHGAP27Q6ZUM4 889 aa12.43□□□□□ -0.42
MRPL48-204ENST00000411840 CCDC87Q9NVE4 849 aa12.43□□□□□ -0.42
MRPL48-204ENST00000411840 KNSTRNQ9Y448 316 aa12.43□□□□□ -0.42
MRPL48-204ENST00000411840 KIF3CO14782 793 aa12.42□□□□□ -0.42
MRPL48-204ENST00000411840 CRKLP46109 303 aaKnown RBP12.42□□□□□ -0.42
MRPL48-204ENST00000411840 FCHSD2O94868 740 aa12.41□□□□□ -0.42
MRPL48-204ENST00000411840 KCNA3P22001 575 aa12.41□□□□□ -0.42
MRPL48-204ENST00000411840 C10orf71Q711Q0 1435 aa12.41□□□□□ -0.42
MRPL48-204ENST00000411840 SRP68Q9UHB9 627 aaKnown RBP12.41□□□□□ -0.42
MRPL48-204ENST00000411840 CICQ96RK0 1608 aaPredicted RBP12.4□□□□□ -0.42
MRPL48-204ENST00000411840 FKBP8Q14318 412 aa12.4□□□□□ -0.42
MRPL48-204ENST00000411840 AKAP4Q5JQC9 854 aa12.4□□□□□ -0.42
MRPL48-204ENST00000411840 INTS5Q6P9B9 1019 aaKnown RBP12.4□□□□□ -0.42
MRPL48-204ENST00000411840 CCER1Q8TC90 406 aaPredicted RBP12.4□□□□□ -0.42
MRPL48-204ENST00000411840 LGR6Q9HBX8 967 aa12.4□□□□□ -0.42
MRPL48-204ENST00000411840 ZNF831Q5JPB2 1677 aa12.39□□□□□ -0.43
MRPL48-204ENST00000411840 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
MRPL48-204ENST00000411840 USP42Q9H9J4 1324 aaKnown RBP12.38□□□□□ -0.43
MRPL48-204ENST00000411840 TM4SF1P30408 202 aa12.38□□□□□ -0.43
MRPL48-204ENST00000411840 DDR1Q08345 913 aa12.38□□□□□ -0.43
MRPL48-204ENST00000411840 IFFO2Q5TF58 517 aa12.38□□□□□ -0.43
MRPL48-204ENST00000411840 DNAJC10Q8IXB1 793 aa12.38□□□□□ -0.43
MRPL48-204ENST00000411840 SLC52A2Q9HAB3 445 aa12.38□□□□□ -0.43
MRPL48-204ENST00000411840 PIM2Q9P1W9 311 aa12.38□□□□□ -0.43
MRPL48-204ENST00000411840 TOMM70O94826 608 aa12.37□□□□□ -0.43
MRPL48-204ENST00000411840 HMOX1P09601 288 aa12.37□□□□□ -0.43
MRPL48-204ENST00000411840 C4AP0C0L4 1744 aa12.37□□□□□ -0.43
MRPL48-204ENST00000411840 RNMTO43148 476 aaKnown RBP12.36□□□□□ -0.43
MRPL48-204ENST00000411840 ZPR1O75312 459 aa12.36□□□□□ -0.43
MRPL48-204ENST00000411840 CYP19A1P11511 503 aaPredicted RBP12.36□□□□□ -0.43
MRPL48-204ENST00000411840 DALRD3Q5D0E6 543 aaKnown RBP12.36□□□□□ -0.43
MRPL48-204ENST00000411840 C9orf131Q5VYM1 1079 aa12.36□□□□□ -0.43
MRPL48-204ENST00000411840 USPL1Q5W0Q7 1092 aa12.36□□□□□ -0.43
MRPL48-204ENST00000411840 NMRK2Q9NPI5 230 aa12.36□□□□□ -0.43
MRPL48-204ENST00000411840 COL5A3P25940 1745 aaPredicted RBP12.35□□□□□ -0.43
MRPL48-204ENST00000411840 KIAA1551Q9HCM1 1747 aa12.35□□□□□ -0.43
MRPL48-204ENST00000411840 POLRMTO00411 1230 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms