RNA–Protein interactions for RNA: ENST00000410782.1

RN7SKP38-201, Transcript of RNA, 7SK small nuclear pseudogene 38, humanhuman

BASIC

Gene RN7SKP38, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP38-201ENST00000410782 CCDC116Q8IYX3 515 aa11.5□□□□□ -0.57
RN7SKP38-201ENST00000410782 MAGI3Q5TCQ9 1506 aa11.5□□□□□ -0.57
RN7SKP38-201ENST00000410782 DHX9Q08211 1270 aaKnown RBP11.49□□□□□ -0.57
RN7SKP38-201ENST00000410782 TRIM26Q12899 539 aaPredicted RBP11.49□□□□□ -0.57
RN7SKP38-201ENST00000410782 NBPF20Q3BBV1 942 aa11.49□□□□□ -0.57
RN7SKP38-201ENST00000410782 MCCD1P59942 119 aaPredicted RBP11.48□□□□□ -0.57
RN7SKP38-201ENST00000410782 DZIP3Q86Y13 1208 aaKnown RBP11.48□□□□□ -0.57
RN7SKP38-201ENST00000410782 ITPKCQ96DU7 683 aa11.48□□□□□ -0.57
RN7SKP38-201ENST00000410782 SKIP12755 728 aa11.47□□□□□ -0.57
RN7SKP38-201ENST00000410782 MRPL14Q6P1L8 145 aaKnown RBP11.47□□□□□ -0.57
RN7SKP38-201ENST00000410782 TRIM46Q7Z4K8 759 aa11.47□□□□□ -0.57
RN7SKP38-201ENST00000410782 PHTF2Q8N3S3 785 aa11.47□□□□□ -0.57
RN7SKP38-201ENST00000410782 SCARF1Q14162 830 aa11.46□□□□□ -0.57
RN7SKP38-201ENST00000410782 NFATC2IPQ8NCF5 419 aa11.46□□□□□ -0.57
RN7SKP38-201ENST00000410782 FBXO41Q8TF61 875 aa11.46□□□□□ -0.57
RN7SKP38-201ENST00000410782 ZNF592Q92610 1267 aa11.46□□□□□ -0.57
RN7SKP38-201ENST00000410782 TRAIPQ9BWF2 469 aa11.46□□□□□ -0.57
RN7SKP38-201ENST00000410782 ZFAND3Q9H8U3 227 aa11.46□□□□□ -0.57
RN7SKP38-201ENST00000410782 PGPEP1Q9NXJ5 209 aa11.46□□□□□ -0.57
RN7SKP38-201ENST00000410782 GOLGA3Q08378 1498 aa11.45□□□□□ -0.58
RN7SKP38-201ENST00000410782 BMP1P13497 986 aa11.45□□□□□ -0.58
RN7SKP38-201ENST00000410782 PPP1R26Q5T8A7 1209 aaPredicted RBP11.45□□□□□ -0.58
RN7SKP38-201ENST00000410782 CFAP43Q8NDM7 1665 aa11.45□□□□□ -0.58
RN7SKP38-201ENST00000410782 SLFNL1Q499Z3 407 aa11.44□□□□□ -0.58
RN7SKP38-201ENST00000410782 KANK4Q5T7N3 995 aaPredicted RBP11.44□□□□□ -0.58
RN7SKP38-201ENST00000410782 ZNF775Q96BV0 537 aaPredicted RBP11.44□□□□□ -0.58
RN7SKP38-201ENST00000410782 ABCA8O94911 1581 aa11.43□□□□□ -0.58
RN7SKP38-201ENST00000410782 SNRPBP14678 240 aaKnown RBP11.43□□□□□ -0.58
RN7SKP38-201ENST00000410782 TSGA10IPQ3SY00 556 aa11.43□□□□□ -0.58
RN7SKP38-201ENST00000410782 INTS6LQ5JSJ4 861 aaKnown RBP11.43□□□□□ -0.58
RN7SKP38-201ENST00000410782 RNF135Q8IUD6 432 aa11.43□□□□□ -0.58
RN7SKP38-201ENST00000410782 DEPDC4Q8N2C3 294 aa11.43□□□□□ -0.58
RN7SKP38-201ENST00000410782 TRIM52Q96A61 297 aa11.43□□□□□ -0.58
RN7SKP38-201ENST00000410782 VRTNQ9H8Y1 702 aa11.43□□□□□ -0.58
RN7SKP38-201ENST00000410782 USP17L5A8MUK1 530 aa11.42□□□□□ -0.58
RN7SKP38-201ENST00000410782 UPP2O95045 317 aa11.42□□□□□ -0.58
RN7SKP38-201ENST00000410782 CCDC125Q86Z20 511 aa11.42□□□□□ -0.58
RN7SKP38-201ENST00000410782 SEPT12Q8IYM1 358 aa11.42□□□□□ -0.58
RN7SKP38-201ENST00000410782 ZFP42Q96MM3 310 aa11.42□□□□□ -0.58
RN7SKP38-201ENST00000410782 KIF21BO75037 1637 aa11.42□□□□□ -0.58
RN7SKP38-201ENST00000410782 ARAP3Q8WWN8 1544 aa11.41□□□□□ -0.58
RN7SKP38-201ENST00000410782 USP17L3A6NCW0 530 aa11.41□□□□□ -0.58
RN7SKP38-201ENST00000410782 USP17L4A6NCW7 530 aa11.41□□□□□ -0.58
RN7SKP38-201ENST00000410782 ESPNB1AK53 854 aa11.41□□□□□ -0.58
RN7SKP38-201ENST00000410782 USP17L2Q6R6M4 530 aa11.41□□□□□ -0.58
RN7SKP38-201ENST00000410782 USP17L1Q7RTZ2 530 aa11.41□□□□□ -0.58
RN7SKP38-201ENST00000410782 FAM9AQ8IZU1 332 aaPredicted RBP11.41□□□□□ -0.58
RN7SKP38-201ENST00000410782 MEIOBQ8N635 442 aa11.41□□□□□ -0.58
RN7SKP38-201ENST00000410782 GIGYF1O75420 1035 aaPredicted RBP11.4□□□□□ -0.58
RN7SKP38-201ENST00000410782 ATG7O95352 703 aa11.4□□□□□ -0.58
RN7SKP38-201ENST00000410782 CARNS1A5YM72 827 aa11.39□□□□□ -0.59
RN7SKP38-201ENST00000410782 PLEKHM2Q8IWE5 1019 aa11.39□□□□□ -0.59
RN7SKP38-201ENST00000410782 PLPP7Q8NBV4 271 aa11.39□□□□□ -0.59
RN7SKP38-201ENST00000410782 PURBQ96QR8 312 aaKnown RBP11.39□□□□□ -0.59
RN7SKP38-201ENST00000410782 TSEN34Q9BSV6 310 aaKnown RBP11.39□□□□□ -0.59
RN7SKP38-201ENST00000410782 CHIC2Q9UKJ5 165 aa11.39□□□□□ -0.59
RN7SKP38-201ENST00000410782 PTPRMP28827 1452 aa11.38□□□□□ -0.59
RN7SKP38-201ENST00000410782 CSB-PGBD3P0DP91 1061 aa11.38□□□□□ -0.59
RN7SKP38-201ENST00000410782 Q6ZVU0 165 aa11.38□□□□□ -0.59
RN7SKP38-201ENST00000410782 CTTNBP2Q8WZ74 1663 aa11.38□□□□□ -0.59
RN7SKP38-201ENST00000410782 PHLDB1Q86UU1 1377 aa11.38□□□□□ -0.59
RN7SKP38-201ENST00000410782 NCOA4Q13772 614 aa11.37□□□□□ -0.59
RN7SKP38-201ENST00000410782 LINC00528Q8N1L1 170 aa11.37□□□□□ -0.59
RN7SKP38-201ENST00000410782 CCDC85AQ96PX6 553 aaPredicted RBP11.37□□□□□ -0.59
RN7SKP38-201ENST00000410782 MKRN1Q9UHC7 482 aaKnown RBP11.37□□□□□ -0.59
RN7SKP38-201ENST00000410782 RAPGEF3O95398 923 aa11.36□□□□□ -0.59
RN7SKP38-201ENST00000410782 RNF20Q5VTR2 975 aa11.36□□□□□ -0.59
RN7SKP38-201ENST00000410782 ARID4BQ4LE39 1312 aaPredicted RBP11.35□□□□□ -0.59
RN7SKP38-201ENST00000410782 BMP2P12643 396 aa11.35□□□□□ -0.59
RN7SKP38-201ENST00000410782 PDE4CQ08493 712 aa11.35□□□□□ -0.59
RN7SKP38-201ENST00000410782 MAP7D1Q3KQU3 841 aa11.35□□□□□ -0.59
RN7SKP38-201ENST00000410782 ATP10BO94823 1461 aa11.35□□□□□ -0.59
RN7SKP38-201ENST00000410782 ADAMTSL3P82987 1691 aa11.34□□□□□ -0.59
RN7SKP38-201ENST00000410782 ERVH48-1M5A8F1 160 aa11.34□□□□□ -0.59
RN7SKP38-201ENST00000410782 C6orf118Q5T5N4 469 aa11.34□□□□□ -0.59
RN7SKP38-201ENST00000410782 AEBP1Q8IUX7 1158 aa11.34□□□□□ -0.59
RN7SKP38-201ENST00000410782 PODXL2Q9NZ53 605 aa11.34□□□□□ -0.59
RN7SKP38-201ENST00000410782 NEO1Q92859 1461 aa11.33□□□□□ -0.6
RN7SKP38-201ENST00000410782 PRXQ9BXM0 1461 aa11.33□□□□□ -0.6
RN7SKP38-201ENST00000410782 LZTS3O60299 673 aaPredicted RBP11.33□□□□□ -0.6
RN7SKP38-201ENST00000410782 RAB15P59190 212 aa11.33□□□□□ -0.6
RN7SKP38-201ENST00000410782 USTQ9Y2C2 406 aa11.33□□□□□ -0.6
RN7SKP38-201ENST00000410782 ABCA9Q8IUA7 1624 aa11.33□□□□□ -0.6
RN7SKP38-201ENST00000410782 CBLBQ13191 982 aa11.32□□□□□ -0.6
RN7SKP38-201ENST00000410782 TMPRSS4Q9NRS4 437 aa11.32□□□□□ -0.6
RN7SKP38-201ENST00000410782 PCF11O94913 1555 aaKnown RBP11.32□□□□□ -0.6
RN7SKP38-201ENST00000410782 ZBTB7CA1YPR0 619 aa11.31□□□□□ -0.6
RN7SKP38-201ENST00000410782 TMEM88BA6NKF7 163 aa11.31□□□□□ -0.6
RN7SKP38-201ENST00000410782 EML3Q32P44 896 aa11.31□□□□□ -0.6
RN7SKP38-201ENST00000410782 CRTC2Q53ET0 693 aaPredicted RBP11.31□□□□□ -0.6
RN7SKP38-201ENST00000410782 TREML4Q6UXN2 200 aa11.31□□□□□ -0.6
RN7SKP38-201ENST00000410782 ZNF784Q8NCA9 323 aaPredicted RBP11.31□□□□□ -0.6
RN7SKP38-201ENST00000410782 CDCA7Q9BWT1 371 aaPredicted RBP11.31□□□□□ -0.6
RN7SKP38-201ENST00000410782 DOLKQ9UPQ8 538 aa11.31□□□□□ -0.6
RN7SKP38-201ENST00000410782 RASA1P20936 1047 aa11.3□□□□□ -0.6
RN7SKP38-201ENST00000410782 ELOAQ14241 798 aaKnown RBP11.3□□□□□ -0.6
RN7SKP38-201ENST00000410782 KCTD17Q8N5Z5 321 aa11.3□□□□□ -0.6
RN7SKP38-201ENST00000410782 ZMIZ1Q9ULJ6 1067 aa11.3□□□□□ -0.6
RN7SKP38-201ENST00000410782 NOVA2Q9UNW9 492 aaKnown RBP11.3□□□□□ -0.6
RN7SKP38-201ENST00000410782 LMTK3Q96Q04 1460 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms