RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 FHOD3Q2V2M9 1422 aa9.65□□□□□ -0.87
LSM5-203ENST00000409782 SMPD1P17405 629 aa9.64□□□□□ -0.87
LSM5-203ENST00000409782 Q6ZNB5 142 aa9.64□□□□□ -0.87
LSM5-203ENST00000409782 VASH1Q7L8A9 365 aaPredicted RBP9.64□□□□□ -0.87
LSM5-203ENST00000409782 PPRC1Q5VV67 1664 aaKnown RBP9.64□□□□□ -0.87
LSM5-203ENST00000409782 KDM6BO15054 1643 aa9.64□□□□□ -0.87
LSM5-203ENST00000409782 ADH1CP00326 375 aa9.63□□□□□ -0.87
LSM5-203ENST00000409782 MAP4K5Q9Y4K4 846 aa9.63□□□□□ -0.87
LSM5-203ENST00000409782 TEX14Q8IWB6 1497 aa9.63□□□□□ -0.87
LSM5-203ENST00000409782 TSPOAP1O95153 1857 aa9.62□□□□□ -0.87
LSM5-203ENST00000409782 NUP153P49790 1475 aaKnown RBP9.62□□□□□ -0.87
LSM5-203ENST00000409782 PCDHB9Q9Y5E1 797 aa9.62□□□□□ -0.87
LSM5-203ENST00000409782 CFAP43Q8NDM7 1665 aa9.61□□□□□ -0.87
LSM5-203ENST00000409782 ATP10BO94823 1461 aa9.61□□□□□ -0.87
LSM5-203ENST00000409782 CARNS1A5YM72 827 aa9.61□□□□□ -0.87
LSM5-203ENST00000409782 MCCD1P59942 119 aaPredicted RBP9.61□□□□□ -0.87
LSM5-203ENST00000409782 NR5A1Q13285 461 aa9.61□□□□□ -0.87
LSM5-203ENST00000409782 NBPF20Q3BBV1 942 aa9.61□□□□□ -0.87
LSM5-203ENST00000409782 CCER1Q8TC90 406 aaPredicted RBP9.61□□□□□ -0.87
LSM5-203ENST00000409782 ZMIZ1Q9ULJ6 1067 aa9.61□□□□□ -0.87
LSM5-203ENST00000409782 FAM196BA6NMK8 535 aa9.6□□□□□ -0.87
LSM5-203ENST00000409782 TXNDC2Q86VQ3 553 aa9.6□□□□□ -0.87
LSM5-203ENST00000409782 ZNF428Q96B54 188 aa9.6□□□□□ -0.87
LSM5-203ENST00000409782 MAGI3Q5TCQ9 1506 aa9.6□□□□□ -0.87
LSM5-203ENST00000409782 USP17L3A6NCW0 530 aa9.59□□□□□ -0.87
LSM5-203ENST00000409782 USP17L4A6NCW7 530 aa9.59□□□□□ -0.87
LSM5-203ENST00000409782 ERCC3P19447 782 aa9.59□□□□□ -0.87
LSM5-203ENST00000409782 GRM5P41594 1212 aa9.59□□□□□ -0.87
LSM5-203ENST00000409782 NNTQ13423 1086 aa9.59□□□□□ -0.87
LSM5-203ENST00000409782 USP17L2Q6R6M4 530 aa9.59□□□□□ -0.87
LSM5-203ENST00000409782 USP17L1Q7RTZ2 530 aa9.59□□□□□ -0.87
LSM5-203ENST00000409782 KCTD15Q96SI1 283 aaPredicted RBP9.59□□□□□ -0.87
LSM5-203ENST00000409782 ARHGAP35Q9NRY4 1499 aa9.59□□□□□ -0.87
LSM5-203ENST00000409782 FMN1Q68DA7 1419 aa9.58□□□□□ -0.88
LSM5-203ENST00000409782 LZTS3O60299 673 aaPredicted RBP9.58□□□□□ -0.88
LSM5-203ENST00000409782 FSHRP23945 695 aa9.58□□□□□ -0.88
LSM5-203ENST00000409782 CDCA8Q53HL2 280 aa9.58□□□□□ -0.88
LSM5-203ENST00000409782 TMEM164Q5U3C3 297 aa9.58□□□□□ -0.88
LSM5-203ENST00000409782 HPS1Q92902 700 aa9.58□□□□□ -0.88
LSM5-203ENST00000409782 HECW1Q76N89 1606 aa9.57□□□□□ -0.88
LSM5-203ENST00000409782 ABCA9Q8IUA7 1624 aa9.57□□□□□ -0.88
LSM5-203ENST00000409782 AVPP01185 164 aa9.57□□□□□ -0.88
LSM5-203ENST00000409782 CTC1Q2NKJ3 1217 aa9.57□□□□□ -0.88
LSM5-203ENST00000409782 NOVA2Q9UNW9 492 aaKnown RBP9.57□□□□□ -0.88
LSM5-203ENST00000409782 CD109Q6YHK3 1445 aa9.56□□□□□ -0.88
LSM5-203ENST00000409782 USP17L5A8MUK1 530 aa9.56□□□□□ -0.88
LSM5-203ENST00000409782 TRAF7Q6Q0C0 670 aa9.56□□□□□ -0.88
LSM5-203ENST00000409782 MYT1Q01538 1121 aa9.55□□□□□ -0.88
LSM5-203ENST00000409782 CCDC116Q8IYX3 515 aa9.55□□□□□ -0.88
LSM5-203ENST00000409782 STK32AQ8WU08 396 aa9.55□□□□□ -0.88
LSM5-203ENST00000409782 RBM47A0AV96 593 aaKnown RBP9.54□□□□□ -0.88
LSM5-203ENST00000409782 PIK3CDO00329 1044 aa9.54□□□□□ -0.88
LSM5-203ENST00000409782 AXIN1O15169 862 aa9.54□□□□□ -0.88
LSM5-203ENST00000409782 ARID4AP29374 1257 aaPredicted RBP9.54□□□□□ -0.88
LSM5-203ENST00000409782 DHX9Q08211 1270 aaKnown RBP9.54□□□□□ -0.88
LSM5-203ENST00000409782 PHLDB3Q6NSJ2 640 aa9.54□□□□□ -0.88
LSM5-203ENST00000409782 USP17L15C9J2P7 530 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 USP17L10C9JJH3 530 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 USP17L13C9JLJ4 530 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 USP17L12C9JPN9 530 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 USP17L11C9JVI0 530 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 USP17L21D6R901 530 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 USP17L18D6R9N7 530 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 USP17L22D6RA61 530 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 USP17L17D6RBQ6 530 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 USP17L19D6RCP7 530 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 USP17L20D6RJB6 530 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 ATP5J2-PTCD1G3V325 749 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 NR3C2P08235 984 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 SKIP12755 728 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 SSFA2P28290 1259 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 RAB15P59190 212 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 USP17L24Q0WX57 530 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 RNF20Q5VTR2 975 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 SEPT12Q8IYM1 358 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 CLP1Q92989 425 aaKnown RBP9.53□□□□□ -0.88
LSM5-203ENST00000409782 TRIM52Q96A61 297 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 EMILIN1Q9Y6C2 1016 aa9.53□□□□□ -0.88
LSM5-203ENST00000409782 COL17A1Q9UMD9 1497 aaPredicted RBP9.53□□□□□ -0.88
LSM5-203ENST00000409782 CDK13Q14004 1512 aaKnown RBP9.52□□□□□ -0.88
LSM5-203ENST00000409782 CAPN5O15484 640 aaPredicted RBP9.52□□□□□ -0.89
LSM5-203ENST00000409782 SMCPP49901 116 aaPredicted RBP9.52□□□□□ -0.89
LSM5-203ENST00000409782 WDR4P57081 412 aaKnown RBP9.52□□□□□ -0.89
LSM5-203ENST00000409782 CCDC125Q86Z20 511 aa9.52□□□□□ -0.89
LSM5-203ENST00000409782 CRIPAKQ8N1N5 446 aa9.52□□□□□ -0.89
LSM5-203ENST00000409782 PGPEP1Q9NXJ5 209 aa9.52□□□□□ -0.89
LSM5-203ENST00000409782 CHIC2Q9UKJ5 165 aa9.52□□□□□ -0.89
LSM5-203ENST00000409782 PHLDB1Q86UU1 1377 aa9.51□□□□□ -0.89
LSM5-203ENST00000409782 ESPNB1AK53 854 aa9.51□□□□□ -0.89
LSM5-203ENST00000409782 GIGYF1O75420 1035 aaPredicted RBP9.51□□□□□ -0.89
LSM5-203ENST00000409782 INTS6LQ5JSJ4 861 aaKnown RBP9.51□□□□□ -0.89
LSM5-203ENST00000409782 CDCA7Q9BWT1 371 aaPredicted RBP9.51□□□□□ -0.89
LSM5-203ENST00000409782 NEO1Q92859 1461 aa9.51□□□□□ -0.89
LSM5-203ENST00000409782 ARAP3Q8WWN8 1544 aa9.51□□□□□ -0.89
LSM5-203ENST00000409782 PCF11O94913 1555 aaKnown RBP9.5□□□□□ -0.89
LSM5-203ENST00000409782 CLIP1P30622 1438 aa9.5□□□□□ -0.89
LSM5-203ENST00000409782 ZIC2O95409 532 aaPredicted RBP9.5□□□□□ -0.89
LSM5-203ENST00000409782 PTK7Q13308 1070 aa9.5□□□□□ -0.89
LSM5-203ENST00000409782 SWI5Q1ZZU3 235 aa9.5□□□□□ -0.89
LSM5-203ENST00000409782 PPP1R26Q5T8A7 1209 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms