RNA–Protein interactions for RNA: ENST00000407817.3

TCN2-203, Transcript of transcobalamin 2, humanhuman

TSL 1 (best) BASIC

Gene TCN2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-203ENST00000407817 SCN11AQ9UI33 1791 aa15.29■□□□□ 0.04
TCN2-203ENST00000407817 DDX19BQ9UMR2 479 aa15.29■□□□□ 0.04
TCN2-203ENST00000407817 KDM2BQ8NHM5 1336 aa15.29■□□□□ 0.04
TCN2-203ENST00000407817 OVOS2A0A0G2JMS6 1433 aa15.28■□□□□ 0.04
TCN2-203ENST00000407817 TATP17735 454 aaPredicted RBP15.28■□□□□ 0.04
TCN2-203ENST00000407817 TEFQ10587 303 aa15.28■□□□□ 0.04
TCN2-203ENST00000407817 TOM1L2Q6ZVM7 507 aa15.28■□□□□ 0.04
TCN2-203ENST00000407817 SIPA1L3O60292 1781 aaPredicted RBP15.28■□□□□ 0.04
TCN2-203ENST00000407817 MPRIPQ6WCQ1 1025 aa15.27■□□□□ 0.03
TCN2-203ENST00000407817 TMEM57Q8N5G2 664 aa15.27■□□□□ 0.03
TCN2-203ENST00000407817 DISP2A7MBM2 1401 aa15.26■□□□□ 0.03
TCN2-203ENST00000407817 EVA1CP58658 441 aa15.26■□□□□ 0.03
TCN2-203ENST00000407817 BCL9LQ86UU0 1499 aa15.26■□□□□ 0.03
TCN2-203ENST00000407817 API5Q9BZZ5 524 aaKnown RBP15.26■□□□□ 0.03
TCN2-203ENST00000407817 LGR6Q9HBX8 967 aa15.26■□□□□ 0.03
TCN2-203ENST00000407817 SPG7Q9UQ90 795 aa15.26■□□□□ 0.03
TCN2-203ENST00000407817 KDM3BQ7LBC6 1761 aa15.24■□□□□ 0.03
TCN2-203ENST00000407817 SOS1Q07889 1333 aaPredicted RBP15.24■□□□□ 0.03
TCN2-203ENST00000407817 RNMTO43148 476 aaKnown RBP15.24■□□□□ 0.03
TCN2-203ENST00000407817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.24■□□□□ 0.03
TCN2-203ENST00000407817 STK31Q9BXU1 1019 aa15.23■□□□□ 0.03
TCN2-203ENST00000407817 CHMP4BQ9H444 224 aaKnown RBP15.23■□□□□ 0.03
TCN2-203ENST00000407817 ABCC4O15439 1325 aa15.23■□□□□ 0.03
TCN2-203ENST00000407817 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
TCN2-203ENST00000407817 PTPRCP08575 1304 aa15.22■□□□□ 0.03
TCN2-203ENST00000407817 BTBD11A6QL63 1104 aa15.22■□□□□ 0.03
TCN2-203ENST00000407817 IGHDP01880 384 aa15.22■□□□□ 0.03
TCN2-203ENST00000407817 CCDC30Q5VVM6 783 aa15.22■□□□□ 0.03
TCN2-203ENST00000407817 FNBP4Q8N3X1 1017 aaPredicted RBP15.22■□□□□ 0.03
TCN2-203ENST00000407817 C8orf37Q96NL8 207 aa15.22■□□□□ 0.03
TCN2-203ENST00000407817 PCDHB15Q9Y5E8 787 aa15.22■□□□□ 0.03
TCN2-203ENST00000407817 KDM6AO15550 1401 aaPredicted RBP15.22■□□□□ 0.03
TCN2-203ENST00000407817 SPATA31A1Q5TZJ5 1347 aa15.21■□□□□ 0.03
TCN2-203ENST00000407817 IL2RBP14784 551 aa15.21■□□□□ 0.03
TCN2-203ENST00000407817 RWDD1Q9H446 243 aaPredicted RBP15.21■□□□□ 0.03
TCN2-203ENST00000407817 CACNA1FO60840 1977 aa15.21■□□□□ 0.03
TCN2-203ENST00000407817 CYP27B1O15528 508 aa15.2■□□□□ 0.02
TCN2-203ENST00000407817 IFNL2Q8IZJ0 200 aa15.2■□□□□ 0.02
TCN2-203ENST00000407817 USP35Q9P2H5 1018 aa15.2■□□□□ 0.02
TCN2-203ENST00000407817 TOGARAM1Q9Y4F4 1720 aa15.2■□□□□ 0.02
TCN2-203ENST00000407817 SPATA31A5Q5VU36 1347 aa15.2■□□□□ 0.02
TCN2-203ENST00000407817 SPATA31A7Q8IWB4 1347 aa15.2■□□□□ 0.02
TCN2-203ENST00000407817 PHKG2P15735 406 aa15.2■□□□□ 0.02
TCN2-203ENST00000407817 UNC5CLQ8IV45 518 aa15.2■□□□□ 0.02
TCN2-203ENST00000407817 ZBTB40Q9NUA8 1239 aa15.2■□□□□ 0.02
TCN2-203ENST00000407817 NGLY1Q96IV0 654 aa15.19■□□□□ 0.02
TCN2-203ENST00000407817 CHMP4AQ9BY43 222 aa15.19■□□□□ 0.02
TCN2-203ENST00000407817 EIF4A1P60842 406 aaKnown RBP15.18■□□□□ 0.02
TCN2-203ENST00000407817 MRC1P22897 1456 aa15.18■□□□□ 0.02
TCN2-203ENST00000407817 HDGFL1Q5TGJ6 251 aa15.18■□□□□ 0.02
TCN2-203ENST00000407817 ZCRB1Q8TBF4 217 aaKnown RBP15.18■□□□□ 0.02
TCN2-203ENST00000407817 NECTIN2Q92692 538 aa15.18■□□□□ 0.02
TCN2-203ENST00000407817 GLI3P10071 1580 aa15.17■□□□□ 0.02
TCN2-203ENST00000407817 HSP90AB1P08238 724 aaKnown RBP15.17■□□□□ 0.02
TCN2-203ENST00000407817 HOXB7P09629 217 aa15.17■□□□□ 0.02
TCN2-203ENST00000407817 ITGB4P16144 1822 aa15.17■□□□□ 0.02
TCN2-203ENST00000407817 ZBTB7BO15156 539 aaPredicted RBP15.16■□□□□ 0.02
TCN2-203ENST00000407817 VPS72Q15906 364 aa15.16■□□□□ 0.02
TCN2-203ENST00000407817 SKAP1Q86WV1 359 aa15.16■□□□□ 0.02
TCN2-203ENST00000407817 RGS12O14924 1447 aa15.16■□□□□ 0.02
TCN2-203ENST00000407817 PCDH11XQ9BZA7 1347 aa15.16■□□□□ 0.02
TCN2-203ENST00000407817 PCDH11YQ9BZA8 1340 aa15.16■□□□□ 0.02
TCN2-203ENST00000407817 KCNQ3O43525 872 aa15.16■□□□□ 0.02
TCN2-203ENST00000407817 INTS3Q68E01 1043 aaKnown RBP15.16■□□□□ 0.02
TCN2-203ENST00000407817 DCAF5Q96JK2 942 aa15.16■□□□□ 0.02
TCN2-203ENST00000407817 SLC52A2Q9HAB3 445 aa15.16■□□□□ 0.02
TCN2-203ENST00000407817 THRAP3Q9Y2W1 955 aaKnown RBP15.16■□□□□ 0.02
TCN2-203ENST00000407817 TNS2Q63HR2 1409 aa15.16■□□□□ 0.02
TCN2-203ENST00000407817 THSD7AQ9UPZ6 1657 aa15.16■□□□□ 0.02
TCN2-203ENST00000407817 G2E3Q7L622 706 aa15.15■□□□□ 0.02
TCN2-203ENST00000407817 EIF2S2P20042 333 aaKnown RBP15.14■□□□□ 0.01
TCN2-203ENST00000407817 HDAC1Q13547 482 aaPredicted RBP15.14■□□□□ 0.01
TCN2-203ENST00000407817 BARGINQ6ZT62 677 aa15.14■□□□□ 0.01
TCN2-203ENST00000407817 USP21Q9UK80 565 aa15.14■□□□□ 0.01
TCN2-203ENST00000407817 AFF2P51816 1311 aa15.14■□□□□ 0.01
TCN2-203ENST00000407817 RGS3P49796 1198 aa15.14■□□□□ 0.01
TCN2-203ENST00000407817 FLIIQ13045 1269 aa15.14■□□□□ 0.01
TCN2-203ENST00000407817 FKBP5Q13451 457 aaPredicted RBP15.14■□□□□ 0.01
TCN2-203ENST00000407817 NKX1-1Q15270 411 aaPredicted RBP15.14■□□□□ 0.01
TCN2-203ENST00000407817 ATRNO75882 1429 aa15.13■□□□□ 0.01
TCN2-203ENST00000407817 PAPPAQ13219 1627 aa15.13■□□□□ 0.01
TCN2-203ENST00000407817 MEX3CQ5U5Q3 659 aaKnown RBP15.13■□□□□ 0.01
TCN2-203ENST00000407817 SLC4A10Q6U841 1118 aa15.13■□□□□ 0.01
TCN2-203ENST00000407817 FBXO41Q8TF61 875 aa15.13■□□□□ 0.01
TCN2-203ENST00000407817 KAT6BQ8WYB5 2073 aa15.13■□□□□ 0.01
TCN2-203ENST00000407817 NFATC2IPQ8NCF5 419 aa15.12■□□□□ 0.01
TCN2-203ENST00000407817 DOT1LQ8TEK3 1739 aa15.12■□□□□ 0.01
TCN2-203ENST00000407817 UBR2Q8IWV8 1755 aa15.12■□□□□ 0.01
TCN2-203ENST00000407817 CCT4P50991 539 aaKnown RBP15.12■□□□□ 0.01
TCN2-203ENST00000407817 CDCA7Q9BWT1 371 aaPredicted RBP15.12■□□□□ 0.01
TCN2-203ENST00000407817 F6X3S4 739 aa15.11■□□□□ 0.01
TCN2-203ENST00000407817 CABP4P57796 275 aa15.11■□□□□ 0.01
TCN2-203ENST00000407817 ZNF790Q6PG37 636 aa15.11■□□□□ 0.01
TCN2-203ENST00000407817 C1orf115Q9H7X2 142 aa15.11■□□□□ 0.01
TCN2-203ENST00000407817 GIGYF1O75420 1035 aaPredicted RBP15.1■□□□□ 0.01
TCN2-203ENST00000407817 TTC5Q8N0Z6 440 aa15.1■□□□□ 0.01
TCN2-203ENST00000407817 CHPF2Q9P2E5 772 aa15.1■□□□□ 0.01
TCN2-203ENST00000407817 CCDC9Q9Y3X0 531 aaKnown RBP15.1■□□□□ 0.01
TCN2-203ENST00000407817 DDX54Q8TDD1 881 aaKnown RBP15.1■□□□□ 0.01
TCN2-203ENST00000407817 HEG1Q9ULI3 1381 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms