RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 POLKQ9UBT6 870 aa29■■■□□ 2.23
RHBDD3-202ENST00000406335 BCS1LQ9Y276 419 aa29■■■□□ 2.23
RHBDD3-202ENST00000406335 ADCY9O60503 1353 aa29■■■□□ 2.23
RHBDD3-202ENST00000406335 NLGN1Q8N2Q7 840 aa28.98■■■□□ 2.23
RHBDD3-202ENST00000406335 TAF1LQ8IZX4 1826 aa28.97■■■□□ 2.23
RHBDD3-202ENST00000406335 HSPA5P11021 654 aaKnown RBP28.97■■■□□ 2.23
RHBDD3-202ENST00000406335 TOGARAM1Q9Y4F4 1720 aa28.97■■■□□ 2.23
RHBDD3-202ENST00000406335 TGFB2P61812 414 aa28.96■■■□□ 2.23
RHBDD3-202ENST00000406335 EIF4A2Q14240 407 aaKnown RBP28.96■■■□□ 2.23
RHBDD3-202ENST00000406335 A0A0G2JLW4 131 aa28.95■■■□□ 2.22
RHBDD3-202ENST00000406335 HSP90AB1P08238 724 aaKnown RBP28.95■■■□□ 2.22
RHBDD3-202ENST00000406335 RFC4P35249 363 aa28.95■■■□□ 2.22
RHBDD3-202ENST00000406335 EIF4G2P78344 907 aaKnown RBP eCLIP28.95■■■□□ 2.22
RHBDD3-202ENST00000406335 ARHGAP27Q6ZUM4 889 aa28.95■■■□□ 2.22
RHBDD3-202ENST00000406335 ITGB4P16144 1822 aa28.94■■■□□ 2.22
RHBDD3-202ENST00000406335 CCDC87Q9NVE4 849 aa28.94■■■□□ 2.22
RHBDD3-202ENST00000406335 NCAPD2Q15021 1401 aa28.94■■■□□ 2.22
RHBDD3-202ENST00000406335 ERVV-2B6SEH9 535 aa28.93■■■□□ 2.22
RHBDD3-202ENST00000406335 CABP4P57796 275 aa28.93■■■□□ 2.22
RHBDD3-202ENST00000406335 PLEKHO1Q53GL0 409 aaPredicted RBP28.93■■■□□ 2.22
RHBDD3-202ENST00000406335 PARP3Q9Y6F1 533 aa28.93■■■□□ 2.22
RHBDD3-202ENST00000406335 PKD1L3Q7Z443 1732 aa28.93■■■□□ 2.22
RHBDD3-202ENST00000406335 KIF3CO14782 793 aa28.92■■■□□ 2.22
RHBDD3-202ENST00000406335 ARHGEF1Q92888 912 aaKnown RBP28.92■■■□□ 2.22
RHBDD3-202ENST00000406335 DCAF5Q96JK2 942 aa28.91■■■□□ 2.22
RHBDD3-202ENST00000406335 FCHSD2O94868 740 aa28.9■■■□□ 2.22
RHBDD3-202ENST00000406335 UBR3Q6ZT12 1888 aa28.89■■■□□ 2.22
RHBDD3-202ENST00000406335 ADRA2BP18089 450 aa28.89■■■□□ 2.22
RHBDD3-202ENST00000406335 RC3H1Q5TC82 1133 aaKnown RBP28.88■■■□□ 2.21
RHBDD3-202ENST00000406335 ZNF530Q6P9A1 599 aaPredicted RBP28.88■■■□□ 2.21
RHBDD3-202ENST00000406335 RPS6KA4O75676 772 aa28.87■■■□□ 2.21
RHBDD3-202ENST00000406335 DPEP1P16444 411 aa28.87■■■□□ 2.21
RHBDD3-202ENST00000406335 MTHFSP49914 203 aa28.86■■■□□ 2.21
RHBDD3-202ENST00000406335 AMOTQ4VCS5 1084 aa28.86■■■□□ 2.21
RHBDD3-202ENST00000406335 C1orf141Q5JVX7 400 aa28.86■■■□□ 2.21
RHBDD3-202ENST00000406335 SLC4A9Q96Q91 983 aa28.86■■■□□ 2.21
RHBDD3-202ENST00000406335 PXDNLA1KZ92 1463 aa28.85■■■□□ 2.21
RHBDD3-202ENST00000406335 MAP2P11137 1827 aaKnown RBP28.85■■■□□ 2.21
RHBDD3-202ENST00000406335 PTCD1O75127 700 aaKnown RBP28.85■■■□□ 2.21
RHBDD3-202ENST00000406335 GYS1P13807 737 aa28.85■■■□□ 2.21
RHBDD3-202ENST00000406335 APLP1P51693 650 aa28.85■■■□□ 2.21
RHBDD3-202ENST00000406335 CEP350Q5VT06 3117 aa28.85■■■□□ 2.21
RHBDD3-202ENST00000406335 TOMM70O94826 608 aa28.84■■■□□ 2.21
RHBDD3-202ENST00000406335 C16orf71Q8IYS4 520 aaPredicted RBP28.83■■■□□ 2.21
RHBDD3-202ENST00000406335 CNTNAP4Q9C0A0 1308 aa28.83■■■□□ 2.21
RHBDD3-202ENST00000406335 ANKRD26Q9UPS8 1709 aa28.81■■■□□ 2.2
RHBDD3-202ENST00000406335 CICQ96RK0 1608 aaPredicted RBP28.81■■■□□ 2.2
RHBDD3-202ENST00000406335 KDRP35968 1356 aa28.81■■■□□ 2.2
RHBDD3-202ENST00000406335 PANK3Q9H999 370 aa28.8■■■□□ 2.2
RHBDD3-202ENST00000406335 PIM2Q9P1W9 311 aa28.8■■■□□ 2.2
RHBDD3-202ENST00000406335 PLEKHG2Q9H7P9 1386 aa28.78■■■□□ 2.2
RHBDD3-202ENST00000406335 C9orf131Q5VYM1 1079 aa28.78■■■□□ 2.2
RHBDD3-202ENST00000406335 MORC1Q86VD1 984 aa28.78■■■□□ 2.2
RHBDD3-202ENST00000406335 NFATC2IPQ8NCF5 419 aa28.78■■■□□ 2.2
RHBDD3-202ENST00000406335 NMRK2Q9NPI5 230 aa28.78■■■□□ 2.2
RHBDD3-202ENST00000406335 C10orf71Q711Q0 1435 aa28.77■■■□□ 2.2
RHBDD3-202ENST00000406335 CRKLP46109 303 aaKnown RBP28.76■■■□□ 2.19
RHBDD3-202ENST00000406335 DALRD3Q5D0E6 543 aaKnown RBP28.76■■■□□ 2.19
RHBDD3-202ENST00000406335 SRP68Q9UHB9 627 aaKnown RBP28.75■■■□□ 2.19
RHBDD3-202ENST00000406335 SULT6B1Q6IMI4 303 aa28.74■■■□□ 2.19
RHBDD3-202ENST00000406335 AEBP1Q8IUX7 1158 aa28.73■■■□□ 2.19
RHBDD3-202ENST00000406335 FKBP8Q14318 412 aa28.72■■■□□ 2.19
RHBDD3-202ENST00000406335 KDM6AO15550 1401 aaPredicted RBP28.71■■■□□ 2.19
RHBDD3-202ENST00000406335 ZPR1O75312 459 aa28.71■■■□□ 2.19
RHBDD3-202ENST00000406335 KCNA3P22001 575 aa28.71■■■□□ 2.19
RHBDD3-202ENST00000406335 RNF181Q9P0P0 153 aa28.7■■■□□ 2.18
RHBDD3-202ENST00000406335 KDM2BQ8NHM5 1336 aa28.69■■■□□ 2.18
RHBDD3-202ENST00000406335 N4BP2Q86UW6 1770 aaPredicted RBP28.69■■■□□ 2.18
RHBDD3-202ENST00000406335 USP42Q9H9J4 1324 aaKnown RBP28.69■■■□□ 2.18
RHBDD3-202ENST00000406335 CHRNA5P30532 468 aa28.68■■■□□ 2.18
RHBDD3-202ENST00000406335 RBM46Q8TBY0 533 aaKnown RBP28.68■■■□□ 2.18
RHBDD3-202ENST00000406335 C4AP0C0L4 1744 aa28.67■■■□□ 2.18
RHBDD3-202ENST00000406335 DDR1Q08345 913 aa28.66■■■□□ 2.18
RHBDD3-202ENST00000406335 KNSTRNQ9Y448 316 aa28.66■■■□□ 2.18
RHBDD3-202ENST00000406335 DNAJC5GQ8N7S2 189 aa28.65■■■□□ 2.18
RHBDD3-202ENST00000406335 RRAGCQ9HB90 399 aa28.65■■■□□ 2.18
RHBDD3-202ENST00000406335 USPL1Q5W0Q7 1092 aa28.64■■■□□ 2.18
RHBDD3-202ENST00000406335 AKAP4Q5JQC9 854 aa28.63■■■□□ 2.17
RHBDD3-202ENST00000406335 INTS5Q6P9B9 1019 aaKnown RBP28.63■■■□□ 2.17
RHBDD3-202ENST00000406335 DNAJC10Q8IXB1 793 aa28.63■■■□□ 2.17
RHBDD3-202ENST00000406335 KIF7Q2M1P5 1343 aa28.63■■■□□ 2.17
RHBDD3-202ENST00000406335 KIF13BQ9NQT8 1826 aa28.62■■■□□ 2.17
RHBDD3-202ENST00000406335 FSTL1Q12841 308 aa28.62■■■□□ 2.17
RHBDD3-202ENST00000406335 POLRMTO00411 1230 aaKnown RBP28.61■■■□□ 2.17
RHBDD3-202ENST00000406335 TM4SF1P30408 202 aa28.6■■■□□ 2.17
RHBDD3-202ENST00000406335 IL13P35225 146 aa28.6■■■□□ 2.17
RHBDD3-202ENST00000406335 HTRA3P83110 453 aa28.6■■■□□ 2.17
RHBDD3-202ENST00000406335 SLC52A2Q9HAB3 445 aa28.6■■■□□ 2.17
RHBDD3-202ENST00000406335 ZNF831Q5JPB2 1677 aa28.6■■■□□ 2.17
RHBDD3-202ENST00000406335 KIAA1551Q9HCM1 1747 aa28.59■■■□□ 2.17
RHBDD3-202ENST00000406335 LGR6Q9HBX8 967 aa28.58■■■□□ 2.17
RHBDD3-202ENST00000406335 SLC39A6Q13433 755 aa28.57■■■□□ 2.16
RHBDD3-202ENST00000406335 KCPQ6ZWJ8 1503 aa28.57■■■□□ 2.16
RHBDD3-202ENST00000406335 COL5A3P25940 1745 aaPredicted RBP28.57■■■□□ 2.16
RHBDD3-202ENST00000406335 KLRG1Q96E93 195 aa28.56■■■□□ 2.16
RHBDD3-202ENST00000406335 HMOX1P09601 288 aa28.55■■■□□ 2.16
RHBDD3-202ENST00000406335 RNMTO43148 476 aaKnown RBP28.54■■■□□ 2.16
RHBDD3-202ENST00000406335 CYP19A1P11511 503 aaPredicted RBP28.54■■■□□ 2.16
RHBDD3-202ENST00000406335 NARFQ9UHQ1 456 aa28.54■■■□□ 2.16
RHBDD3-202ENST00000406335 SOS1Q07889 1333 aaPredicted RBP28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms