RNA–Protein interactions for RNA: ENST00000405878.5

XRCC6-205, Transcript of X-ray repair cross complementing 6, humanhuman

APPRIS P1 TSL 5 BASIC

Gene XRCC6, Length 2,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-205ENST00000405878 NUP188Q5SRE5 1749 aa12.87□□□□□ -0.35
XRCC6-205ENST00000405878 RAB3GAP1Q15042 981 aa12.86□□□□□ -0.35
XRCC6-205ENST00000405878 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.86□□□□□ -0.35
XRCC6-205ENST00000405878 ANP32BQ92688 251 aaKnown RBP12.86□□□□□ -0.35
XRCC6-205ENST00000405878 MAP7D2Q96T17 732 aa12.86□□□□□ -0.35
XRCC6-205ENST00000405878 RBM25P49756 843 aaKnown RBP12.86□□□□□ -0.35
XRCC6-205ENST00000405878 TTC21BQ7Z4L5 1316 aa12.86□□□□□ -0.35
XRCC6-205ENST00000405878 WDR17Q8IZU2 1322 aa12.86□□□□□ -0.35
XRCC6-205ENST00000405878 TTC21AQ8NDW8 1320 aa12.85□□□□□ -0.35
XRCC6-205ENST00000405878 MVPQ14764 893 aaKnown RBP12.85□□□□□ -0.35
XRCC6-205ENST00000405878 ARHGEF25Q86VW2 580 aa12.85□□□□□ -0.35
XRCC6-205ENST00000405878 TNNQ9UQP3 1299 aa12.85□□□□□ -0.35
XRCC6-205ENST00000405878 CPSF1Q10570 1443 aaKnown RBP12.85□□□□□ -0.35
XRCC6-205ENST00000405878 NASPP49321 788 aaPredicted RBP12.85□□□□□ -0.35
XRCC6-205ENST00000405878 WDR63Q8IWG1 891 aa12.85□□□□□ -0.35
XRCC6-205ENST00000405878 BCL11BQ9C0K0 894 aaPredicted RBP12.85□□□□□ -0.35
XRCC6-205ENST00000405878 SPON1Q9HCB6 807 aa12.85□□□□□ -0.35
XRCC6-205ENST00000405878 AXIN2Q9Y2T1 843 aa12.85□□□□□ -0.35
XRCC6-205ENST00000405878 COL18A1P39060 1754 aa12.84□□□□□ -0.35
XRCC6-205ENST00000405878 MSNP26038 577 aaKnown RBP12.84□□□□□ -0.35
XRCC6-205ENST00000405878 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.84□□□□□ -0.35
XRCC6-205ENST00000405878 PIK3C2AO00443 1686 aa12.84□□□□□ -0.35
XRCC6-205ENST00000405878 PEAK1Q9H792 1746 aa12.84□□□□□ -0.35
XRCC6-205ENST00000405878 KCNQ2O43526 872 aa12.84□□□□□ -0.35
XRCC6-205ENST00000405878 PRDM4Q9UKN5 801 aa12.84□□□□□ -0.35
XRCC6-205ENST00000405878 CSB-PGBD3P0DP91 1061 aa12.83□□□□□ -0.36
XRCC6-205ENST00000405878 RIPK4P57078 832 aa12.83□□□□□ -0.36
XRCC6-205ENST00000405878 HDAC1Q13547 482 aaPredicted RBP12.83□□□□□ -0.36
XRCC6-205ENST00000405878 CARD10Q9BWT7 1032 aa12.83□□□□□ -0.36
XRCC6-205ENST00000405878 LRRC37A3O60309 1634 aa12.83□□□□□ -0.36
XRCC6-205ENST00000405878 IBTKQ9P2D0 1353 aaPredicted RBP12.83□□□□□ -0.36
XRCC6-205ENST00000405878 SOX12O15370 315 aa12.82□□□□□ -0.36
XRCC6-205ENST00000405878 SLC24A1O60721 1099 aa12.82□□□□□ -0.36
XRCC6-205ENST00000405878 HSP90AB1P08238 724 aaKnown RBP12.82□□□□□ -0.36
XRCC6-205ENST00000405878 HS1BP3Q53T59 392 aa12.82□□□□□ -0.36
XRCC6-205ENST00000405878 RUNDC1Q96C34 613 aa12.82□□□□□ -0.36
XRCC6-205ENST00000405878 PUS7Q96PZ0 661 aaKnown RBP12.82□□□□□ -0.36
XRCC6-205ENST00000405878 BCL2L13Q9BXK5 485 aa12.82□□□□□ -0.36
XRCC6-205ENST00000405878 PPP1R1BQ9UD71 204 aaPredicted RBP12.82□□□□□ -0.36
XRCC6-205ENST00000405878 BCL9O00512 1426 aa12.82□□□□□ -0.36
XRCC6-205ENST00000405878 RGPD3A6NKT7 1758 aaPredicted RBP12.82□□□□□ -0.36
XRCC6-205ENST00000405878 RGPD4Q7Z3J3 1758 aa12.82□□□□□ -0.36
XRCC6-205ENST00000405878 CD163L1Q9NR16 1453 aa12.82□□□□□ -0.36
XRCC6-205ENST00000405878 MARCH10Q8NA82 808 aaPredicted RBP12.82□□□□□ -0.36
XRCC6-205ENST00000405878 SBF2Q86WG5 1849 aa12.81□□□□□ -0.36
XRCC6-205ENST00000405878 AKAP12Q02952 1782 aa12.81□□□□□ -0.36
XRCC6-205ENST00000405878 EXOC5O00471 708 aa12.81□□□□□ -0.36
XRCC6-205ENST00000405878 HDGFL2Q7Z4V5 671 aaPredicted RBP12.81□□□□□ -0.36
XRCC6-205ENST00000405878 PODXL2Q9NZ53 605 aa12.81□□□□□ -0.36
XRCC6-205ENST00000405878 MYOM1P52179 1685 aa12.81□□□□□ -0.36
XRCC6-205ENST00000405878 DCAF8L1A6NGE4 600 aa12.81□□□□□ -0.36
XRCC6-205ENST00000405878 GOLGA6L22H0YM25 854 aa12.81□□□□□ -0.36
XRCC6-205ENST00000405878 NEUROD2Q15784 382 aa12.81□□□□□ -0.36
XRCC6-205ENST00000405878 ZKSCAN2Q63HK3 967 aa12.81□□□□□ -0.36
XRCC6-205ENST00000405878 FTSJ3Q8IY81 847 aaKnown RBP12.81□□□□□ -0.36
XRCC6-205ENST00000405878 DZIP1LQ8IYY4 767 aaKnown RBP12.81□□□□□ -0.36
XRCC6-205ENST00000405878 TERF2IPQ9NYB0 399 aa12.81□□□□□ -0.36
XRCC6-205ENST00000405878 A0A1W2PP64 1363 aa12.81□□□□□ -0.36
XRCC6-205ENST00000405878 CCDC27Q2M243 656 aa12.8□□□□□ -0.36
XRCC6-205ENST00000405878 NME9Q86XW9 330 aa12.8□□□□□ -0.36
XRCC6-205ENST00000405878 RBM10P98175 930 aaKnown RBP12.8□□□□□ -0.36
XRCC6-205ENST00000405878 KLHL40Q2TBA0 621 aa12.8□□□□□ -0.36
XRCC6-205ENST00000405878 CLEC17AQ6ZS10 378 aa12.8□□□□□ -0.36
XRCC6-205ENST00000405878 WNK3Q9BYP7 1800 aa12.79□□□□□ -0.36
XRCC6-205ENST00000405878 CARD14Q9BXL6 1004 aa12.79□□□□□ -0.36
XRCC6-205ENST00000405878 RRP7AQ9Y3A4 280 aaKnown RBP12.79□□□□□ -0.36
XRCC6-205ENST00000405878 MTERF4Q7Z6M4 381 aaKnown RBP12.78□□□□□ -0.36
XRCC6-205ENST00000405878 ABCC6O95255 1503 aa12.78□□□□□ -0.36
XRCC6-205ENST00000405878 RGPD5Q99666 1765 aa12.78□□□□□ -0.36
XRCC6-205ENST00000405878 USP31Q70CQ4 1352 aa12.78□□□□□ -0.36
XRCC6-205ENST00000405878 ZNF500O60304 480 aaPredicted RBP12.78□□□□□ -0.36
XRCC6-205ENST00000405878 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
XRCC6-205ENST00000405878 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
XRCC6-205ENST00000405878 PROM2Q8N271 834 aa12.78□□□□□ -0.36
XRCC6-205ENST00000405878 FAM13BQ9NYF5 915 aa12.78□□□□□ -0.36
XRCC6-205ENST00000405878 NOL7Q9UMY1 257 aaKnown RBP12.78□□□□□ -0.36
XRCC6-205ENST00000405878 CT47B1P0C2W7 299 aaPredicted RBP12.77□□□□□ -0.36
XRCC6-205ENST00000405878 DDX19BQ9UMR2 479 aa12.77□□□□□ -0.36
XRCC6-205ENST00000405878 NFAT5O94916 1531 aa12.77□□□□□ -0.37
XRCC6-205ENST00000405878 YY1P25490 414 aa12.77□□□□□ -0.37
XRCC6-205ENST00000405878 R3HCC1Q9Y3T6 440 aaKnown RBP12.77□□□□□ -0.37
XRCC6-205ENST00000405878 DDX49Q9Y6V7 483 aaKnown RBP12.77□□□□□ -0.37
XRCC6-205ENST00000405878 K7ELQ4 463 aaPredicted RBP12.76□□□□□ -0.37
XRCC6-205ENST00000405878 ZNF445P59923 1031 aa12.76□□□□□ -0.37
XRCC6-205ENST00000405878 TXNRD1Q16881 649 aa12.76□□□□□ -0.37
XRCC6-205ENST00000405878 EDC4Q6P2E9 1401 aaKnown RBP12.76□□□□□ -0.37
XRCC6-205ENST00000405878 KIF2CQ99661 725 aa12.76□□□□□ -0.37
XRCC6-205ENST00000405878 STK32BQ9NY57 414 aa12.76□□□□□ -0.37
XRCC6-205ENST00000405878 MON2Q7Z3U7 1717 aa12.75□□□□□ -0.37
XRCC6-205ENST00000405878 SMAP1Q8IYB5 467 aaPredicted RBP12.75□□□□□ -0.37
XRCC6-205ENST00000405878 DYNC1I1O14576 645 aa12.74□□□□□ -0.37
XRCC6-205ENST00000405878 BAG4O95429 457 aaKnown RBP12.74□□□□□ -0.37
XRCC6-205ENST00000405878 SSFA2P28290 1259 aa12.74□□□□□ -0.37
XRCC6-205ENST00000405878 NUCB1Q02818 461 aa12.74□□□□□ -0.37
XRCC6-205ENST00000405878 SLC15A2Q16348 729 aa12.74□□□□□ -0.37
XRCC6-205ENST00000405878 CSPP1Q1MSJ5 1256 aa12.74□□□□□ -0.37
XRCC6-205ENST00000405878 PDLIM2Q96JY6 352 aa12.74□□□□□ -0.37
XRCC6-205ENST00000405878 NLRP2Q9NX02 1062 aa12.74□□□□□ -0.37
XRCC6-205ENST00000405878 ERBB3P21860 1342 aa12.74□□□□□ -0.37
XRCC6-205ENST00000405878 ANKRD36BQ8N2N9 1353 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms